DNA Copy Number Selection Using Robust Structured Sparsity-Inducing Norms

Effective features extraction by analyzing heart sound for identifying cardiovascular diseases related to COVID-19: A diagnostic model

Incidence and exacerbation of some of the cardiovascular diseases in the presence of the coronavirus will lead to an increase in the mortality rate among patients. Therefore, early diagnosis of such diseases is critical, especially during the COVID-19 pandemic (mild COVID-19 infection). Thus, for diagnosing the heart diseases related to the COVID-19, an automatic, non-invasive, and inexpensive method based on the heart sound processing approach is proposed. In the present study, a set of features related to the nature of heart signals is defined and extracted. The investigated features included morphological and statistical features in the heart sound frequencies. By extracting and selecting a set of effective features related to the mentioned diseases, and avoiding to use different segmentation and filtering techniques, dependence on a limited dataset and specific sampling procedures has been eliminated. Different classifiers with various kernels are applied for diagnosis in data unbalanced and balanced conditions. The results showed 93.15% accuracy and 93.72% F1-score using 60 effective features in data balanced conditions. The identification system using the extracted features from Azad dataset is able to achieve the desired results in a generalized dataset. In this way, in the shortest possible sampling time, the present system provided an effective and generalizable method and a practical model for diagnosing important cardiovascular diseases in the presence of coronavirus in the COVID-19 pandemic.

EFFECTIVE FEATURES ANALYSIS IN PARALLEL DIAGNOSIS OF CARDIOVASCULAR DISEASES USING HEART SOUND

Heart sound signal processing is a low-cost, and noninvasive method for the early diagnosis of various types of cardiovascular diseases. In this study, a parallel diagnosing method was proposed to detect various types of heart diseases and healthy heart samples. The proposed system can detect a person who might be simultaneously suffering from two or more heart diseases. Contributing to this line of investigation, effective features were obtained from the morphological and statistical features extracted from five frequency ranges of heart sounds. Applying such features in diagnosing any heart disease acts as a fingerprint specific to that disease. Therefore, the investigation of selected features, especially in each of the frequency ranges of heart sounds and murmurs, provided us with valuable information about the behavior of the diagnostic system in the detection of heart diseases. In addition to using features related to the nature of heart sounds, the proposed method of this study got rid of both the need to apply different filters needed to remove noise and dependence on a specific dataset. With the aid of the effective features in the parallel diagnosis of 15 different types of important and common heart diseases and a healthy class from each other, the diagnostic system of the present study was able to achieve the average accuracy of 97.06%, the average sensitivity of 97.99%, and the average specificity of 96.18% in the shortest possible time. The proposed approach is an important step in the screening and remote monitoring and tracking of disease progression.

An Early Intestinal Cancer Prediction Algorithm Based on Deep Belief Network

The incidence of colorectal cancer (colorectal cancer, CRC) in China has increased in recent years, and its mortality rate has become one of the highest among all cancers. CRC also increasingly affects people’s health and quality of life, and the workloads of medical doctors have further increased due to the lack of sufficient medical resources in China. The goal of this study was to construct an automated expert system using a deep learning technique to predict the probability of early stage CRC based on the patient’s case report and the patient’s attributes. Compared with previous prediction methods, which are either based on sophisticated examinations or have high computational complexity, this method is shown to provide valuable information such as suggesting potentially important early signs to assist in early diagnosis, early treatment and prevention of CRC, hence helping medical doctors reduce the workloads of endoscopies and other treatments.

Feature selection methods for big data bioinformatics: A survey from the search perspective

This paper surveys main principles of feature selection and their recent applications in big data bioinformatics. Instead of the commonly used categorization into filter, wrapper, and embedded approaches to feature selection, we formulate feature selection as a combinatorial optimization or search problem and categorize feature selection methods into exhaustive search, heuristic search, and hybrid methods, where heuristic search methods may further be categorized into those with or without data-distilled feature ranking measures.

Classification of MRI under the Presence of Disease Heterogeneity using Multi-Task Learning: Application to Bipolar Disorder

Heterogeneity in psychiatric and neurological disorders has undermined our ability to understand the pathophysiology underlying their clinical manifestations. In an effort to better distinguish clinical subtypes, many disorders, such as Bipolar Disorder, have been further sub-categorized into subgroups, albeit with criteria that are not very clear, reproducible and objective. Imaging, along with pattern analysis and classification methods, offers promise for developing objective and quantitative ways for disease subtype categorization. Herein, we develop such a method using learning multiple tasks, assuming that each task corresponds to a disease subtype but that subtypes share some common imaging characteristics, along with having distinct features. In particular, we extend the original SVM method by incorporating the sparsity and the group sparsity techniques to allow simultaneous joint learning for all diagnostic tasks. Experiments on Multi-Task Bipolar Disorder classification demonstrate the advantages of our proposed methods compared to other state-of-art pattern analysis approaches.