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Huang Y, Yan W, Xia M, Guo Y, Zhou G, Wang Y. Vessel membrane segmentation and calcification location in intravascular ultrasound images using a region detector and an effective selection strategy. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2020; 189:105339. [PMID: 31978806 DOI: 10.1016/j.cmpb.2020.105339] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 01/03/2020] [Accepted: 01/14/2020] [Indexed: 06/10/2023]
Abstract
BACKGROUND AND OBJECTIVE Segmenting vessel membranes and locating the calcific region in intravascular ultrasound (IVUS) images aid physicians in the diagnosis of atherosclerosis. However, the manual extraction of the media adventitia (MA)/lumen border and calcification location are cumbersome due to the excessive number of IVUS frames. Moreover, most existing (semi-)automatic detection methods cannot achieve both vessel membrane extraction and calcification location simultaneously, and they are unable to detect vessel membranes in IVUS frames from different acquisition systems. METHOD A fully automatic approach is proposed based on extremal regions and a flexible selection strategy to extract vessel membranes in different IVUS frames and locate the calcific region in high-frequency ones. Three main steps are included in the algorithm. First, a region detector is employed to extract extremal regions from an IVUS image. Then, according to the selection strategy, a part of the extracted regions is selected. At the same time, the calcification is located according to its special acoustic properties. Next, approximate MA and lumen border segmentation is achieved based on the selected extremal regions and the located calcification in polar coordinates. Finally, the final segmentation results are obtained by smoothing the approximate values. RESULT To demonstrate the feasibility of the method, it was evaluated based on a standard public dataset. Furthermore, to quantitatively evaluate the segmentation performance, the Hausdorff distance (HD), Jaccard measure (JM) and percentage of area difference (PAD) were used. The results show that a mean HD of 1.13/1.21 mm, a mean JM of 0.83/0.77 and a mean PAD of 0.11/0.23 are achieved for MA/lumen border detection in 77 40-MHz IVUS images. For MA/lumen border extraction in 435 20-MHz IVUS frames, the average HD, JM and PAD values are 0.47/0.28 mm, 0.84/0.89 and 0.13/0.10, respectively. In addition, the approach successfully achieves calcification location in 40-MHz IVUS frames. In comparison with other published methods, the method proposed in this study is competitive. CONCLUSION According to these results, our strategy can extract MA/lumen borders in different IVUS frames and effectively locate calcification in high-frequency IVUS frames.
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Affiliation(s)
- Yi Huang
- Department of Electronic Engineering, Fudan University, Shanghai, 200433, China
| | - Wenjun Yan
- Department of Electronic Engineering, Fudan University, Shanghai, 200433, China
| | - Menghua Xia
- Department of Electronic Engineering, Fudan University, Shanghai, 200433, China
| | - Yi Guo
- Department of Electronic Engineering, Fudan University, Shanghai, 200433, China; Key Laboratory of Medical Imaging Computing and Computer Assisted Intervention of Shanghai, Fudan University, 200433, China
| | - Guohui Zhou
- Department of Electronic Engineering, Fudan University, Shanghai, 200433, China; Key Laboratory of Medical Imaging Computing and Computer Assisted Intervention of Shanghai, Fudan University, 200433, China
| | - Yuanyuan Wang
- Department of Electronic Engineering, Fudan University, Shanghai, 200433, China; Key Laboratory of Medical Imaging Computing and Computer Assisted Intervention of Shanghai, Fudan University, 200433, China.
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Moshfegh A, Javadzadegan A, Mohammadi M, Ravipudi L, Cheng S, Martins R. Development of an innovative technology to segment luminal borders of intravascular ultrasound image sequences in a fully automated manner. Comput Biol Med 2019; 108:111-121. [PMID: 31003174 DOI: 10.1016/j.compbiomed.2019.03.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2018] [Revised: 03/09/2019] [Accepted: 03/09/2019] [Indexed: 11/17/2022]
Abstract
Although intravascular ultrasound (IVUS) is the commonest intravascular imaging modality, it still is inefficient for clinical use as it requires laborious manual analysis. This study demonstrates the feasibility of a near real-time fully automated technology for accurate identification, detection, and quantification of luminal borders in intravascular images. This technology uses a combination of the novel approaches of a self-tuning engine, dynamic and static masking systems, radar-wise scan, and contour correction cycle method. The performance of the computer algorithm developed based on this technology was tested on a sequence of IVUS and True Vessel Characterization (TVC) images obtained from the left anterior descending (LAD) artery of 6 patients with coronary artery disease. The accuracy of the algorithm was evaluated by comparing luminal borders traced manually with those detected automatically. The processing time of the developed algorithm was also tested on a Dell laptop with an Intel Core i7-8750H Processor (4.1 GHz with 6 cores, 9 MB Cache). Linear regression and Bland-Altman analyses indicated high correlation between manual and automatic tracings (Y = 0.80 × X+1.70, R2 = 0.88 & 0.67 ± 1.31 (bias±SD)). Whereas analysis of 2000 IVUS images using one CPU core with a 30% load took 23.12 min, the same analysis using six CPU cores with 90% load took 1.0 min. The performance, accuracy, and speed of the presented state-of-the-art technology demonstrates its capacity for use in clinical settings.
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Affiliation(s)
- Abouzar Moshfegh
- Faculty of Medicine and Health Sciences, Macquarie University, Sydney, NSW, 2109, Australia; ANZAC Research Institute, The University of Sydney, Sydney, NSW, 2139, Australia.
| | - Ashkan Javadzadegan
- Faculty of Medicine and Health Sciences, Macquarie University, Sydney, NSW, 2109, Australia; ANZAC Research Institute, The University of Sydney, Sydney, NSW, 2139, Australia
| | - Maryam Mohammadi
- Faculty of Medicine and Health Sciences, Macquarie University, Sydney, NSW, 2109, Australia
| | - Lakshitha Ravipudi
- School of Aerospace, Mechanical and Mechatronic Engineering, The University of Sydney, NSW, 2006, Australia
| | - Shaokoon Cheng
- School of Engineering, Macquarie University, Sydney, NSW, 2109, Australia
| | - Ralph Martins
- Faculty of Medicine and Health Sciences, Macquarie University, Sydney, NSW, 2109, Australia; School of Exercise, Biomedical and Health Sciences, Edith Cowan University, Perth, Australia
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Chen F, Ma R, Liu J, Zhu M, Liao H. Lumen and media-adventitia border detection in IVUS images using texture enhanced deformable model. Comput Med Imaging Graph 2018; 66:1-13. [PMID: 29481899 DOI: 10.1016/j.compmedimag.2018.02.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Revised: 01/30/2018] [Accepted: 02/12/2018] [Indexed: 10/18/2022]
Abstract
Lumen and media-adventitia (MA) borders in intravascular ultrasound (IVUS) images are critical for assessing the dimensions of vascular structures and providing plaque information in the diagnosis and navigation of vascular interventions. However, manual delineation of the lumen and MA borders is an intricate and time-consuming process. In this paper, a texture-enhanced deformable model (TEDM) is proposed to accurately detect these borders by incorporating texture information with the morphological factors of deformable model. An ensemble support vector machine classifier is used to classify IVUS pixels presented by texture features into different tissue types. The image regionalization maps of different tissue types are further used for texture enhancement modules in the TEDM. The proposed TEDM method has been tested on 1500 images from 15 clinical IVUS datasets by comparing with the manual delineations. Evaluation results demonstrate that our method can accurately detect lumen and MA surfaces with small surface distance errors of 0.17 and 0.19 mm, respectively. Accurate segmentation results provide 2D measurements of MA/lumen areas and 3D vessel visualizations for vascular interventions.
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Affiliation(s)
- Fang Chen
- Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing, 100084, China
| | - Ruibin Ma
- Department of Electronic Engineering, Tsinghua University, Beijing, China
| | - Jia Liu
- Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing, 100084, China
| | - Mingyu Zhu
- Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing, 100084, China
| | - Hongen Liao
- Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing, 100084, China.
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Gao Z, Hau WK, Lu M, Huang W, Zhang H, Wu W, Liu X, Zhang YT. Automated Framework for Detecting Lumen and Media-Adventitia Borders in Intravascular Ultrasound Images. ULTRASOUND IN MEDICINE & BIOLOGY 2015; 41:2001-2021. [PMID: 25922134 DOI: 10.1016/j.ultrasmedbio.2015.03.022] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2014] [Revised: 03/16/2015] [Accepted: 03/19/2015] [Indexed: 06/04/2023]
Abstract
An automated framework for detecting lumen and media-adventitia borders in intravascular ultrasound images was developed on the basis of an adaptive region-growing method and an unsupervised clustering method. To demonstrate the capability of the framework, linear regression, Bland-Altman analysis and distance analysis were used to quantitatively investigate the correlation, agreement and spatial distance, respectively, between our detected borders and manually traced borders in 337 intravascular ultrasound images in vivo acquired from six patients. The results of these investigations revealed good correlation (r = 0.99), good agreement (>96.82% of results within the 95% confidence interval) and small average distance errors (lumen border: 0.08 mm, media-adventitia border: 0.10 mm) between the borders generated by the automated framework and the manual tracing method. The proposed framework was found to be effective in detecting lumen and media-adventitia borders in intravascular ultrasound images, indicating its potential for use in routine studies of vascular disease.
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Affiliation(s)
- Zhifan Gao
- Shenzhen College of Advanced Technology, University of Chinese Academy of Sciences, Shenzhen, China; Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China; Key Lab for Health Informatics, Chinese Academy of Sciences, Shenzhen, China
| | - William Kongto Hau
- Institute of Cardiovascular Medicine and Research, LiKaShing Faculty of Medicine, University of Hong Kong, Hong Kong, China
| | - Minhua Lu
- Department of Biomedical Engineering, School of Medicine, Shenzhen University, Shenzhen, China
| | - Wenhua Huang
- Institute of Clinical Anatomy, Southern Medical University, Guangzhou, China
| | - Heye Zhang
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China; Key Lab for Health Informatics, Chinese Academy of Sciences, Shenzhen, China.
| | - Wanqing Wu
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China; Key Lab for Health Informatics, Chinese Academy of Sciences, Shenzhen, China
| | - Xin Liu
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China; Key Lab for Health Informatics, Chinese Academy of Sciences, Shenzhen, China
| | - Yuan-Ting Zhang
- Shenzhen College of Advanced Technology, University of Chinese Academy of Sciences, Shenzhen, China; Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China; Key Lab for Health Informatics, Chinese Academy of Sciences, Shenzhen, China; The Joint Research Centre for Biomedical Engineering, Department of Electronic Engineering, Chinese University of Hong Kong, Hong Kong, China
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Zhao F, Xie X, Roach M. Computer Vision Techniques for Transcatheter Intervention. IEEE JOURNAL OF TRANSLATIONAL ENGINEERING IN HEALTH AND MEDICINE 2015; 3:1900331. [PMID: 27170893 PMCID: PMC4848047 DOI: 10.1109/jtehm.2015.2446988] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/13/2015] [Revised: 04/10/2015] [Accepted: 06/09/2015] [Indexed: 12/02/2022]
Abstract
Minimally invasive transcatheter technologies have demonstrated substantial promise for the diagnosis and the treatment of cardiovascular diseases. For example, transcatheter aortic valve implantation is an alternative to aortic valve replacement for the treatment of severe aortic stenosis, and transcatheter atrial fibrillation ablation is widely used for the treatment and the cure of atrial fibrillation. In addition, catheter-based intravascular ultrasound and optical coherence tomography imaging of coronary arteries provides important information about the coronary lumen, wall, and plaque characteristics. Qualitative and quantitative analysis of these cross-sectional image data will be beneficial to the evaluation and the treatment of coronary artery diseases such as atherosclerosis. In all the phases (preoperative, intraoperative, and postoperative) during the transcatheter intervention procedure, computer vision techniques (e.g., image segmentation and motion tracking) have been largely applied in the field to accomplish tasks like annulus measurement, valve selection, catheter placement control, and vessel centerline extraction. This provides beneficial guidance for the clinicians in surgical planning, disease diagnosis, and treatment assessment. In this paper, we present a systematical review on these state-of-the-art methods. We aim to give a comprehensive overview for researchers in the area of computer vision on the subject of transcatheter intervention. Research in medical computing is multi-disciplinary due to its nature, and hence, it is important to understand the application domain, clinical background, and imaging modality, so that methods and quantitative measurements derived from analyzing the imaging data are appropriate and meaningful. We thus provide an overview on the background information of the transcatheter intervention procedures, as well as a review of the computer vision techniques and methodologies applied in this area.
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Affiliation(s)
- Feng Zhao
- Department of Computer ScienceSwansea UniversitySwanseaSA2 8PPU.K.
| | - Xianghua Xie
- Department of Computer ScienceSwansea UniversitySwanseaSA2 8PPU.K.
| | - Matthew Roach
- Department of Computer ScienceSwansea UniversitySwanseaSA2 8PPU.K.
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Automatic lumen segmentation in IVOCT images using binary morphological reconstruction. Biomed Eng Online 2013; 12:78. [PMID: 23937790 PMCID: PMC3751056 DOI: 10.1186/1475-925x-12-78] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2013] [Accepted: 08/08/2013] [Indexed: 11/25/2022] Open
Abstract
Background Atherosclerosis causes millions of deaths, annually yielding billions in expenses round the world. Intravascular Optical Coherence Tomography (IVOCT) is a medical imaging modality, which displays high resolution images of coronary cross-section. Nonetheless, quantitative information can only be obtained with segmentation; consequently, more adequate diagnostics, therapies and interventions can be provided. Since it is a relatively new modality, many different segmentation methods, available in the literature for other modalities, could be successfully applied to IVOCT images, improving accuracies and uses. Method An automatic lumen segmentation approach, based on Wavelet Transform and Mathematical Morphology, is presented. The methodology is divided into three main parts. First, the preprocessing stage attenuates and enhances undesirable and important information, respectively. Second, in the feature extraction block, wavelet is associated with an adapted version of Otsu threshold; hence, tissue information is discriminated and binarized. Finally, binary morphological reconstruction improves the binary information and constructs the binary lumen object. Results The evaluation was carried out by segmenting 290 challenging images from human and pig coronaries, and rabbit iliac arteries; the outcomes were compared with the gold standards made by experts. The resultant accuracy was obtained: True Positive (%) = 99.29 ± 2.96, False Positive (%) = 3.69 ± 2.88, False Negative (%) = 0.71 ± 2.96, Max False Positive Distance (mm) = 0.1 ± 0.07, Max False Negative Distance (mm) = 0.06 ± 0.1. Conclusions In conclusion, by segmenting a number of IVOCT images with various features, the proposed technique showed to be robust and more accurate than published studies; in addition, the method is completely automatic, providing a new tool for IVOCT segmentation.
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Mendizabal-Ruiz EG, Rivera M, Kakadiaris IA. Segmentation of the luminal border in intravascular ultrasound B-mode images using a probabilistic approach. Med Image Anal 2013; 17:649-70. [DOI: 10.1016/j.media.2013.02.003] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2012] [Revised: 01/28/2013] [Accepted: 02/04/2013] [Indexed: 10/27/2022]
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Katouzian A, Angelini ED, Carlier SG, Suri JS, Navab N, Laine AF. A state-of-the-art review on segmentation algorithms in intravascular ultrasound (IVUS) images. ACTA ACUST UNITED AC 2012; 16:823-34. [PMID: 22389156 DOI: 10.1109/titb.2012.2189408] [Citation(s) in RCA: 72] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Over the past two decades, intravascular ultrasound (IVUS) image segmentation has remained a challenge for researchers while the use of this imaging modality is rapidly growing in catheterization procedures and in research studies. IVUS provides cross-sectional grayscale images of the arterial wall and the extent of atherosclerotic plaques with high spatial resolution in real time. In this paper, we review recently developed image processing methods for the detection of media-adventitia and luminal borders in IVUS images acquired with different transducers operating at frequencies ranging from 20 to 45 MHz. We discuss methodological challenges, lack of diversity in reported datasets, and weaknesses of quantification metrics that make IVUS segmentation still an open problem despite all efforts. In conclusion, we call for a common reference database, validation metrics, and ground-truth definition with which new and existing algorithms could be benchmarked.
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Zhang Q, Wang Y, Wang W, Ma J, Qian J, Ge J. Automatic segmentation of calcifications in intravascular ultrasound images using snakes and the contourlet transform. ULTRASOUND IN MEDICINE & BIOLOGY 2010; 36:111-129. [PMID: 19900745 DOI: 10.1016/j.ultrasmedbio.2009.06.1097] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2009] [Revised: 06/17/2009] [Accepted: 06/25/2009] [Indexed: 05/28/2023]
Abstract
It is valuable to detect calcifications in intravascular ultrasound images for studies of coronary artery diseases. An image segmentation method based on snakes and the Contourlet transform is proposed to automatically and accurately detect calcifications. With the Contourlet transform, an original image is decomposed into low-pass bands and band-pass directional sub-bands. The 2-D Renyi's entropy is used to adaptively threshold the low-pass bands in a multiresolution hierarchy to determine regions-of-interest (ROIs). Then a mean intensity ratio, reflecting acoustic shadowing, is presented to classify calcifications from noncalcifications and obtain initial contours of calcifications. The anisotropic diffusion is used in bandpass directional sub-bands to suppress noise and preserve calcific edges. Finally, the contour deformation in the boundary vector field is used to obtain final contours of calcifications. The method was evaluated via 60 simulated images and 86 in vivo images. It outperformed a recently proposed method, the Santos Filho method, by 2.76% and 14.53%, in terms of the sensitivity and specificity of calcification detection, respectively. The area under the receiver operating characteristic curve increased by 0.041. The relative mean distance error, relative difference degree, relative arc difference, relative thickness difference and relative length difference were reduced by 5.73%, 19.79%, 11.62%, 12.06% and 20.51%, respectively. These results reveal that the proposed method can automatically and accurately detect calcifications and delineate their boundaries. (E-mail: yywang@fudan.edu.cn).
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Affiliation(s)
- Qi Zhang
- Department of Electronic Engineering, Fudan University, 200032, Shanghai, P.R. China
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Papadogiorgaki M, Mezaris V, Chatzizisis YS, Giannoglou GD, Kompatsiaris I. Image analysis techniques for automated IVUS contour detection. ULTRASOUND IN MEDICINE & BIOLOGY 2008; 34:1482-1498. [PMID: 18439746 DOI: 10.1016/j.ultrasmedbio.2008.01.022] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2007] [Revised: 12/21/2007] [Accepted: 01/31/2008] [Indexed: 05/26/2023]
Abstract
Intravascular ultrasound (IVUS) constitutes a valuable technique for the diagnosis of coronary atherosclerosis. The detection of lumen and media-adventitia borders in IVUS images represents a necessary step towards the reliable quantitative assessment of atherosclerosis. In this work, a fully automated technique for the detection of lumen and media-adventitia borders in IVUS images is presented. This comprises two different steps for contour initialization: one for each corresponding contour of interest and a procedure for the refinement of the detected contours. Intensity information, as well as the result of texture analysis, generated by means of a multilevel discrete wavelet frames decomposition, are used in two different techniques for contour initialization. For subsequently producing smooth contours, three techniques based on low-pass filtering and radial basis functions are introduced. The different combinations of the proposed methods are experimentally evaluated in large datasets of IVUS images derived from human coronary arteries. It is demonstrated that our proposed segmentation approaches can quickly and reliably perform automated segmentation of IVUS images.
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Affiliation(s)
- Maria Papadogiorgaki
- Informatics and Telematics Institute (ITI)/ Centre for Research and Technology Hellas (CERTH), Thessaloniki, Greece.
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Sanz R, Bodí V, Sanchís J, Moratal D, Núñez J, Palau P, García D, Rieta JJ, Sanchís JM, Chorro FJ, Llácer A. Desarrollo de software para la reconstrucción tridimensional y cuantificación automática de secuencias de ultrasonido intravascular. Experiencia inicial. Rev Esp Cardiol 2006; 59:879-88. [PMID: 17020700 DOI: 10.1157/13092795] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
INTRODUCTION AND OBJECTIVES Quantification of intravascular ultrasound (IVUS) images is essential in ischemic heart disease and interventional cardiology. Manual analysis is very slow and expensive. We describe an automated computerized method of analysis that requires only minimal initial input from a specialist. METHODS This study was carried out by interventional cardiologists and biomedical engineers working in close collaboration. We developed software in which it was necessary only to identify the media-adventitia boundary in a few images taken from the whole sequence. A three-dimensional reconstruction was then generated from each sequence, from which measurements of areas and volumes could be derived automatically. In total, 2300 randomly selected images from video sequences of 11 patients were analyzed. RESULTS Results obtained using the proposed method differed only minimally from those obtained with the manual method: for vessel area measurements, the variability was 0.08 (0.07) (mean absolute error [standard deviation] normalized to the actual value; this corresponds to an error of 0.08 mm(2) per mm(2) of vessel area); for lumen area, 0.11 (0.11) (normalized), and for plaque volume, 0.5 (0.3) (normalized). Regions with severe lesions (<4 mm(2)) were correctly identified in more than 90% of cases. Specialist time needed for each reconstruction was 10 (8) minutes (vs 60 [10] minutes for manual analysis; P< .0001). CONCLUSIONS The computerized method used dramatically reduced the time and effort needed for IVUS sequence analysis, and the automated measurements obtained were very promising.
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Affiliation(s)
- Roberto Sanz
- Grupo de Bioingeniería, Electrónica y Telemedicina, Universidad Politécnica, Valencia, España
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