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Hashemi HS, Mohammed SK, Zeng Q, Azar RZ, Rohling RN, Salcudean SE. 3-D Ultrafast Shear Wave Absolute Vibro-Elastography Using a Matrix Array Transducer. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2023; 70:1039-1053. [PMID: 37235463 DOI: 10.1109/tuffc.2023.3280450] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Real-time ultrasound imaging plays an important role in ultrasound-guided interventions. The 3-D imaging provides more spatial information compared to conventional 2-D frames by considering the volumes of data. One of the main bottlenecks of 3-D imaging is the long data acquisition time, which reduces practicality and can introduce artifacts from unwanted patient or sonographer motion. This article introduces the first shear wave absolute vibro-elastography (S-WAVE) method with real-time volumetric acquisition using a matrix array transducer. In S-WAVE, an external vibration source generates mechanical vibrations inside the tissue. The tissue motion is then estimated and used in solving a wave equation inverse problem to provide the tissue elasticity. A matrix array transducer is used with a Verasonics ultrasound machine and a frame rate of 2000 volumes/s to acquire 100 radio frequency (RF) volumes in 0.05 s. Using plane wave (PW) and compounded diverging wave (CDW) imaging methods, we estimate axial, lateral, and elevational displacements over 3-D volumes. The curl of the displacements is used with local frequency estimation to estimate elasticity in the acquired volumes. Ultrafast acquisition extends substantially the possible S-WAVE excitation frequency range, now up to 800 Hz, enabling new tissue modeling and characterization. The method was validated on three homogeneous liver fibrosis phantoms and on four different inclusions within a heterogeneous phantom. The homogeneous phantom results show less than 8% (PW) and 5% (CDW) difference between the manufacturer values and the corresponding estimated values over a frequency range of 80-800 Hz. The estimated elasticity values for the heterogeneous phantom at 400-Hz excitation frequency show the average errors of 9% (PW) and 6% (CDW) compared to the provided average values by magnetic resonance elastography (MRE). Furthermore, both imaging methods were able to detect the inclusions within the elasticity volumes. An ex vivo study on a bovine liver sample shows less than 11% (PW) and 9% (CDW) difference between the estimated elasticity ranges by the proposed method and the elasticity ranges provided by MRE and acoustic radiation force impulse (ARFI).
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Ma S, Wang R, Qiu S, Li R, Yue Q, Sun Q, Chen L, Yan F, Yang GZ, Feng Y. MR Elastography With Optimization-Based Phase Unwrapping and Traveling Wave Expansion-Based Neural Network (TWENN). IEEE TRANSACTIONS ON MEDICAL IMAGING 2023; 42:2631-2642. [PMID: 37030683 DOI: 10.1109/tmi.2023.3261346] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
Magnetic Resonance Elastography (MRE) can characterize biomechanical properties of soft tissue for disease diagnosis and treatment planning. However, complicated wavefields acquired from MRE coupled with noise pose challenges for accurate displacement extraction and modulus estimation. Using optimization-based displacement extraction and Traveling Wave Expansion-based Neural Network (TWENN) modulus estimation, we propose a new pipeline for processing MRE images. An objective function with Dual Data Consistency (Dual-DC) has been used to ensure accurate phase unwrapping and displacement extraction. For the estimation of complex wavenumbers, a complex-valued neural network with displacement covariance as an input has been developed. A model of traveling wave expansion is used to generate training datasets for the network with varying levels of noise. The complex shear modulus map is obtained through fusion of multifrequency and multidirectional data. Validation using brain and liver simulation images demonstrates the practical value of the proposed pipeline, which can estimate the biomechanical properties with minimal root-mean-square errors when compared to state-of-the-art methods. Applications of the proposed method for processing MRE images of phantom, brain, and liver reveal clear anatomical features, robustness to noise, and good generalizability of the pipeline.
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Meyer T, Marticorena Garcia S, Tzschätzsch H, Herthum H, Shahryari M, Stencel L, Braun J, Kalra P, Kolipaka A, Sack I. Comparison of inversion methods in MR elastography: An open-access pipeline for processing multifrequency shear-wave data and demonstration in a phantom, human kidneys, and brain. Magn Reson Med 2022; 88:1840-1850. [PMID: 35691940 DOI: 10.1002/mrm.29320] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Revised: 04/22/2022] [Accepted: 05/11/2022] [Indexed: 11/06/2022]
Abstract
PURPOSE Magnetic resonance elastography (MRE) maps the viscoelastic properties of soft tissues for diagnostic purposes. However, different MRE inversion methods yield different results, which hinder comparison of values, standardization, and establishment of quantitative MRE markers. Here, we introduce an expandable, open-access, webserver-based platform that offers multiple inversion techniques for multifrequency, 3D MRE data. METHODS The platform comprises a data repository and standard MRE inversion methods including local frequency estimation (LFE), direct-inversion based multifrequency dual elasto-visco (MDEV) inversion, and wavenumber-based (k-) MDEV. The use of the platform is demonstrated in phantom data and in vivo multifrequency MRE data of the kidneys and brains of healthy volunteers. RESULTS Detailed maps of stiffness were generated by all inversion methods showing similar detail of anatomy. Specifically, the inner renal cortex had higher shear wave speed (SWS) than renal medulla and outer cortex without lateral differences. k-MDEV yielded higher SWS values than MDEV or LFE (full kidney/brain k-MDEV: 2.71 ± 0.19/1.45 ± 0.14 m/s, MDEV: 2.14 ± 0.16/0.99 ± 0.11 m/s, LFE: 2.12 ± 0.15/0.89 ± 0.06 m/s). CONCLUSION The freely accessible platform supports the comparison of MRE results obtained with different inversion methods, filter thresholds, or excitation frequencies, promoting reproducibility in MRE across community-developed methods.
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Affiliation(s)
- Tom Meyer
- Department of Radiology, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | | | - Heiko Tzschätzsch
- Department of Radiology, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Helge Herthum
- Institute of Medical Informatics, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Mehrgan Shahryari
- Department of Radiology, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Lisa Stencel
- Department of Radiology, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Jürgen Braun
- Institute of Medical Informatics, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Prateek Kalra
- Department of Biomedical Engineering, The Ohio State University, Columbus, Ohio, USA.,Department of Radiology, The Ohio State University Wexner Medical Center, Columbus, Ohio, USA
| | - Arunark Kolipaka
- Department of Biomedical Engineering, The Ohio State University, Columbus, Ohio, USA.,Department of Radiology, The Ohio State University Wexner Medical Center, Columbus, Ohio, USA
| | - Ingolf Sack
- Department of Radiology, Charité - Universitätsmedizin Berlin, Berlin, Germany
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Khodayi-Mehr R, Urban MW, Zavlanos MM, Aquino W. Plane wave elastography: a frequency-domain ultrasound shear wave elastography approach. Phys Med Biol 2021; 66. [PMID: 34140433 DOI: 10.1088/1361-6560/ac01b8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2020] [Accepted: 05/14/2021] [Indexed: 12/19/2022]
Abstract
In this paper, we propose plane wave elastography (PWE), a novel ultrasound shear wave elastography (SWE) approach. Currently, commercial methods for SWE rely on directional filtering based on the prior knowledge of the wave propagation direction, to remove complicated wave patterns formed due to reflection and refraction. The result is a set of decomposed directional waves that are separately analyzed to construct shear modulus fields that are then combined through compounding. Instead, PWE relies on a rigorous representation of the wave propagation using the frequency-domain scalar wave equation to automatically select appropriate propagation directions and simultaneously reconstruct shear modulus fields. Specifically, assuming a homogeneous, isotropic, incompressible, linear-elastic medium, we represent the solution of the wave equation using a linear combination of plane waves propagating in arbitrary directions. Given this closed-form solution, we formulate the SWE problem as a nonlinear least-squares optimization problem which can be solved very efficiently. Through numerous phantom studies, we show that PWE can handle complicated waveforms without prior filtering and is competitive with state-of-the-art that requires prior filtering based on the knowledge of propagation directions.
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Affiliation(s)
- Reza Khodayi-Mehr
- Department of Mechanical Engineering and Materials Science, Duke University, Durham, NC 27708, United States of America
| | - Matthew W Urban
- Department of Radiology, Mayo Clinic, Rochester, MN 55905, United States of America
| | - Michael M Zavlanos
- Department of Mechanical Engineering and Materials Science, Duke University, Durham, NC 27708, United States of America
| | - Wilkins Aquino
- Department of Mechanical Engineering and Materials Science, Duke University, Durham, NC 27708, United States of America
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Zeng Q, Honarvar M, Schneider C, Mohammad SK, Lobo J, Pang EHT, Lau KT, Hu C, Jago J, Erb SR, Rohling R, Salcudean SE. Three-Dimensional Multi-Frequency Shear Wave Absolute Vibro-Elastography (3D S-WAVE) With a Matrix Array Transducer: Implementation and Preliminary In Vivo Study of the Liver. IEEE TRANSACTIONS ON MEDICAL IMAGING 2021; 40:648-660. [PMID: 33108283 DOI: 10.1109/tmi.2020.3034065] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Magnetic resonance elastography (MRE) is commonly regarded as the imaging-based gold-standard for liver fibrosis staging, comparable to biopsy. While ultrasound-based elastography methods for liver fibrosis staging have been developed, they are confined to a 1D or a 2D region of interest and to a limited depth. 3D Shear Wave Absolute Vibro-Elastography (S-WAVE) is a steady-state, external excitation, volumetric elastography technique that is similar to MRE, but has the additional advantage of multi-frequency excitation. We present a novel ultrasound matrix array implementation of S-WAVE that takes advantage of 3D imaging. We use a matrix array transducer to sample axial multi-frequency steady-state tissue motion over a volume, using a Color Power Angiography sequence. Tissue motion with the frequency components {40,50,60} and {45,55,65} Hz are acquired over a (90° lateral) × (40° elevational) × (16 cm depth) sector with an acquisition time of 12 seconds. We compute the elasticity map in 3D using local spatial frequency estimation. We characterize this new approach in tissue phantoms against measurements obtained with transient elastography and MRE. Six healthy volunteers and eight patients with chronic liver disease were imaged. Their MRE and S-WAVE volumes were aligned using T1 to B-mode registration for direct comparison in common regions of interest. S-WAVE and MRE results are correlated with R2 = 0.92, while MRE and TE results are correlated with R2 = 0.71. Our findings show that S-WAVE with matrix array has the potential to deliver a similar assessment of liver fibrosis as MRE in a more accessible, inexpensive way, to a broader set of patients.
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Hashemi HS, Honarvar M, Salcudean T, Rohling R. 3D Global Time-Delay Estimation for Shear-Wave Absolute Vibro-Elastography of the Placenta. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2020:2079-2083. [PMID: 33018415 DOI: 10.1109/embc44109.2020.9175657] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
The placenta is a vital organ for growth and development of the fetus. Shear Wave Absolute Vibro-Elastography (SWAVE) is a new elastography technique proposed to detect placenta disorders. Elastography involves applying a force on the tissue and measuring the resulting tissue deformation. All types of compression cause the tissue to expand in three directions given the biological tissues are nearly incompressible. Hence, 3D displacement estimation should lead to the most accurate elasticity reconstruction compared to the traditional 1D methods. Previous studies estimated 3D displacements over ultrasound volumes mostly for quasi-static compression to generate strain images. However, accurate displacement tracking of dynamic motion continues to be a challenge. In this work, a novel volumetric regularized algorithm, 3D GLobal Ultrasound Elastography (GLUE3D), is presented to estimate the 3D displacement over a volume of ultrasound data, following by a 3D Young's modulus reconstruction. The proposed method outperforms the previous 2D method over a volume and is compared with a 3D technique using phantom data for which the elasticity are provided by the values from magnetic resonance elastography on the same phantom and also the manufacturer reference numbers. We then present Young's modulus reconstruction results obtained from clinical data of placenta which shows more uniform elasticity maps compared to the traditional 1D displacement measurements over a volume of ultrasound data. Furthermore, the dependency of the elasticity values to the frequency is investigated in this study.
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Fovargue D, Fiorito M, Capilnasiu A, Nordsletten D, Lee J, Sinkus R. Towards noninvasive estimation of tumour pressure by utilising MR elastography and nonlinear biomechanical models: a simulation and phantom study. Sci Rep 2020; 10:5588. [PMID: 32221324 PMCID: PMC7101441 DOI: 10.1038/s41598-020-62367-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Accepted: 03/11/2020] [Indexed: 01/22/2023] Open
Abstract
The solid and fluid pressures of tumours are often elevated relative to surrounding tissue. This increased pressure is known to correlate with decreased treatment efficacy and potentially with tumour aggressiveness and therefore, accurate noninvasive estimates of tumour pressure would be of great value. We present a proof-of-concept method to infer the total tumour pressure, that is the sum of the fluid and solid parts, by examining stiffness in the peritumoural tissue with MR elastography and utilising nonlinear biomechanical models. The pressure from the tumour deforms the surrounding tissue leading to changes in stiffness. Understanding and accounting for these biases in stiffness has the potential to enable estimation of total tumour pressure. Simulations are used to validate the method with varying pressure levels, tumour shape, tumour size, and noise levels. Results show excellent matching in low noise cases and still correlate well with higher noise. Percent error remains near or below 10% for higher pressures in all noise level cases. Reconstructed pressures were also calculated from experiments with a catheter balloon embedded in a plastisol phantom at multiple inflation levels. Here the reconstructed pressures generally match the increases in pressure measured during the experiments. Percent errors between average reconstructed and measured pressures at four inflation states are 17.9%, 52%, 23.2%, and 0.9%. Future work will apply this method to in vivo data, potentially providing an important biomarker for cancer diagnosis and treatment.
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Affiliation(s)
- Daniel Fovargue
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom.
| | - Marco Fiorito
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - Adela Capilnasiu
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - David Nordsletten
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
- Department of Biomedical Engineering and Cardiac Surgery, University of Michigan, Ann Arbor, Michigan, USA
| | - Jack Lee
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
| | - Ralph Sinkus
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom
- INSERM UMRS1148 - Laboratory for Vascular Translational Science, University Paris, Paris, France
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McIlvain G, Ganji E, Cooper C, Killian ML, Ogunnaike BA, Johnson CL. Reliable preparation of agarose phantoms for use in quantitative magnetic resonance elastography. J Mech Behav Biomed Mater 2019; 97:65-73. [PMID: 31100487 DOI: 10.1016/j.jmbbm.2019.05.001] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Revised: 04/28/2019] [Accepted: 05/02/2019] [Indexed: 12/28/2022]
Abstract
Agarose phantoms are one type of phantom commonly used in developing in vivo brain magnetic resonance elastography (MRE) sequences because they are inexpensive and easy to work with, store, and dispose of; however, protocols for creating agarose phantoms are non-standardized and often result in inconsistent phantoms with significant variability in mechanical properties. Many magnetic resonance imaging (MRI) and ultrasound studies use phantoms, but often these phantoms are not tailored for desired mechanical properties and as such are too stiff or not mechanically consistent enough to be used in MRE. In this work, we conducted a systematic study of agarose phantom creation parameters to identify those factors that are most conducive to producing mechanically consistent agarose phantoms for MRE research. We found that cooling rate and liquid temperature affected phantom homogeneity. Phantom stiffness is affected by agar concentration (quadratically), by final liquid temperature and salt content in phantoms, and by the interaction of these two metrics each with stir rate. We captured and quantified the implied relationships with a regression model that can be used to estimate stiffness of resulting phantoms. Additionally, we characterized repeatability, stability over time, impact on MR signal parameters, and differences in agar gel microstructure. This protocol and regression model should prove beneficial in future MRE development studies that use phantoms to determine stiffness measurement accuracy.
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Affiliation(s)
- Grace McIlvain
- Department of Biomedical Engineering, University of Delaware, Newark, DE, USA
| | - Elahe Ganji
- Department of Mechanical Engineering, University of Delaware, Newark, DE, USA
| | - Catherine Cooper
- Department of Linguistics and Cognitive Science, University of Delaware, Newark, DE, USA
| | - Megan L Killian
- Department of Biomedical Engineering, University of Delaware, Newark, DE, USA
| | - Babatunde A Ogunnaike
- Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE, USA
| | - Curtis L Johnson
- Department of Biomedical Engineering, University of Delaware, Newark, DE, USA.
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Bhatt M, Moussu MAC, Chayer B, Destrempes F, Gesnik M, Allard L, Tang A, Cloutier G. Reconstruction of Viscosity Maps in Ultrasound Shear Wave Elastography. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2019; 66:1065-1078. [PMID: 30990181 DOI: 10.1109/tuffc.2019.2908550] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Change in viscoelastic properties of biological tissues may often be symptomatic of a dysfunction that can be correlated to tissue pathology. Shear wave elastography is an imaging method mainly used to assess stiffness but with the potential to measure viscoelasticity of biological tissues. This can enable tissue characterization; and thus, can be used as a marker to improve diagnosis of pathological lesions. In this study, a frequency-shift method based framework is presented for the reconstruction of viscosity by analyzing the spectral properties of acoustic radiation force-induced shear waves. The aim of the study was to investigate the feasibility of viscosity reconstruction maps in homogeneous as well as heterogeneous samples. Experiments were performed in four in vitro phantoms, two ex vivo porcine liver samples, two ex vivo fatty duck liver samples, and one in vivo fatty goose liver. Successful viscosity maps were reconstructed in homogeneous and heterogeneous phantoms with embedded mechanical inclusions having different geometries. Quantitative values of viscosity obtained for two porcine liver tissues, two fatty duck liver samples, and one goose fatty liver were (mean ± SD) 0.61 ± 0.21, 0.52 ± 0.35; 1.28 ± 0.54, 1.36 ± 0.73, and 1.67 ± 0.70 Pa.s, respectively.
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Fovargue D, Nordsletten D, Sinkus R. Stiffness reconstruction methods for MR elastography. NMR IN BIOMEDICINE 2018; 31:e3935. [PMID: 29774974 PMCID: PMC6175248 DOI: 10.1002/nbm.3935] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2017] [Revised: 03/27/2018] [Accepted: 03/27/2018] [Indexed: 05/19/2023]
Abstract
Assessment of tissue stiffness is desirable for clinicians and researchers, as it is well established that pathophysiological mechanisms often alter the structural properties of tissue. Magnetic resonance elastography (MRE) provides an avenue for measuring tissue stiffness and has a long history of clinical application, including staging liver fibrosis and stratifying breast cancer malignancy. A vital component of MRE consists of the reconstruction algorithms used to derive stiffness from wave-motion images by solving inverse problems. A large range of reconstruction methods have been presented in the literature, with differing computational expense, required user input, underlying physical assumptions, and techniques for numerical evaluation. These differences, in turn, have led to varying accuracy, robustness, and ease of use. While most reconstruction techniques have been validated against in silico or in vitro phantoms, performance with real data is often more challenging, stressing the robustness and assumptions of these algorithms. This article reviews many current MRE reconstruction methods and discusses the aforementioned differences. The material assumptions underlying the methods are developed and various approaches for noise reduction, regularization, and numerical discretization are discussed. Reconstruction methods are categorized by inversion type, underlying assumptions, and their use in human and animal studies. Future directions, such as alternative material assumptions, are also discussed.
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Affiliation(s)
- Daniel Fovargue
- Imaging Sciences & Biomedical EngineeringKing's College LondonLondonUK
| | - David Nordsletten
- Imaging Sciences & Biomedical EngineeringKing's College LondonLondonUK
| | - Ralph Sinkus
- Imaging Sciences & Biomedical EngineeringKing's College LondonLondonUK
- Inserm U1148, LVTSUniversity Paris Diderot, University Paris 13Paris75018France
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Fovargue D, Kozerke S, Sinkus R, Nordsletten D. Robust MR elastography stiffness quantification using a localized divergence free finite element reconstruction. Med Image Anal 2018; 44:126-142. [DOI: 10.1016/j.media.2017.12.005] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2017] [Revised: 10/10/2017] [Accepted: 12/04/2017] [Indexed: 01/24/2023]
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Honarvar M, Sahebjavaher RS, Rohling R, Salcudean SE. A Comparison of Finite Element-Based Inversion Algorithms, Local Frequency Estimation, and Direct Inversion Approach Used in MRE. IEEE TRANSACTIONS ON MEDICAL IMAGING 2017; 36:1686-1698. [PMID: 28333623 DOI: 10.1109/tmi.2017.2686388] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
In quantitative elastography, maps of the mechanical properties of soft tissue, or elastograms, are calculated from the measured displacement data by solving an inverse problem. The model assumptions have a significant effect on elastograms. Motivated by the high sensitivity of imaging results to the model assumptions for in vivo magnetic resonance elastography of the prostate, we compared elastograms obtained with four different methods. Two finite-element method (FEM)-based methods developed by our group were compared with two other commonly used methods, local frequency estimator (LFE) and curl-based direct inversion (c-DI). All the methods assume a linear isotropic elastic model, but the methods vary in their assumptions, such as local homogeneity or incompressibility, and in the specific approach used. We report results using simulations, phantom, and ex vivo and in vivo data. The simulation and phantom studies show, for regions with an inclusion, that the contrast to noise ratio (CNR) for the FEM methods is about three to five times higher than the CNR for the LFE and c-DI and the rms error is about half. The LFE method produces very smooth results (i.e., low CNR) and is fast. c-DI is faster than the FEM methods but it is only accurate in areas where elasticity variations are small. The artifacts resulting from the homogeneity assumption in c-DI is detrimental in regions with large variations. The ex vivo and in vivo results also show similar trends as the simulation and phantom studies. The c-FEM method is more sensitive to noise compared with the mixed-FEM due to higher orders derivatives. This is especially evident at lower frequencies, where the wave curvature is smaller and it is more prone to such error, causing a discrepancy in the absolute values between the mixed-FEM and c-FEM in our in vivo results. In general, the proposed FEMs use fewer simplifying assumptions and outperform the other methods but they are computationally more expensive.
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Kennedy P, Macgregor LJ, Barnhill E, Johnson CL, Perrins M, Hunter A, Brown C, van Beek EJR, Roberts N. MR elastography measurement of the effect of passive warmup prior to eccentric exercise on thigh muscle mechanical properties. J Magn Reson Imaging 2017; 46:1115-1127. [PMID: 28218814 PMCID: PMC5600114 DOI: 10.1002/jmri.25642] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2016] [Accepted: 01/06/2017] [Indexed: 01/19/2023] Open
Abstract
Purpose To investigate the effect of warmup by application of the thermal agent Deep Heat (DH) on muscle mechanical properties using magnetic resonance elastography (MRE) at 3T before and after exercise‐induced muscle damage (EIMD). Materials and Methods Twenty male participants performed an individualized protocol designed to induce EIMD in the quadriceps. DH was applied to the thigh in 50% of the participants before exercise. MRE, T2‐weighted MRI, maximal voluntary contraction (MVC), creatine kinase (CK) concentration, and muscle soreness were measured before and after the protocol to assess EIMD effects. Five participants were excluded: four having not experienced EIMD and one due to incidental findings. Results Total workload performed during the EIMD protocol was greater in the DH group than the control group (P < 0.03), despite no significant differences in baseline MVC (P = 0.23). Shear stiffness |G*| increased in the rectus femoris (RF) muscle in both groups (P < 0.03); however, DH was not a significant between‐group factor (P = 0.15). MVC values returned to baseline faster in the DH group (5 days) than the control group (7 days). Participants who displayed hyperintensity on T2‐weighted images had a greater stiffness increase following damage than those without: RF; 0.61 kPa vs. 0.15 kPa, P < 0.006, vastus intermedius; 0.34 kPa vs. 0.03 kPa, P = 0.06. Conclusion EIMD produces increased muscle stiffness as measured by MRE, with the change in |G*| significantly increased when T2 hyperintensity was present. DH did not affect CK concentration or soreness; however, DH participants produced greater workload during the EIMD protocol and exhibited accelerated MVC recovery. Level of Evidence: 1 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2017;46:1115–1127.
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Affiliation(s)
- Paul Kennedy
- Clinical Research Imaging Centre (CRIC), Queen's Medical Research Institute, University of Edinburgh, Edinburgh, UK.,Translational and Molecular Imaging Institute (TMII), Icahn School of Medicine at Mount Sinai, New York, USA
| | - Lewis J Macgregor
- Health and Exercise Research Group, School of Sport, University of Stirling, UK
| | - Eric Barnhill
- Department of Radiological Science, Charité-Universitätsmedizin, Berlin, Germany
| | - Curtis L Johnson
- Department of Biomedical Engineering, University of Delaware, Newark, Delaware, USA
| | - Michael Perrins
- Clinical Research Imaging Centre (CRIC), Queen's Medical Research Institute, University of Edinburgh, Edinburgh, UK
| | - Angus Hunter
- Health and Exercise Research Group, School of Sport, University of Stirling, UK
| | - Colin Brown
- The Mentholatum Company Ltd, East Kilbride, Glasgow, UK
| | - Edwin J R van Beek
- Clinical Research Imaging Centre (CRIC), Queen's Medical Research Institute, University of Edinburgh, Edinburgh, UK
| | - Neil Roberts
- Clinical Research Imaging Centre (CRIC), Queen's Medical Research Institute, University of Edinburgh, Edinburgh, UK
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Tzschätzsch H, Guo J, Dittmann F, Hirsch S, Barnhill E, Jöhrens K, Braun J, Sack I. Tomoelastography by multifrequency wave number recovery from time-harmonic propagating shear waves. Med Image Anal 2016; 30:1-10. [PMID: 26845371 DOI: 10.1016/j.media.2016.01.001] [Citation(s) in RCA: 98] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2015] [Revised: 12/23/2015] [Accepted: 01/04/2016] [Indexed: 01/02/2023]
Abstract
Palpation is one of the most sensitive, effective diagnostic practices, motivating the quantitative and spatially resolved determination of soft tissue elasticity parameters by medical ultrasound or MRI. However, this so-called elastography often suffers from limited anatomical resolution due to noise and insufficient elastic deformation, currently precluding its use as a tomographic modality on its own. We here introduce an efficient way of processing wave images acquired by multifrequency magnetic resonance elastography (MMRE), which relies on wave number reconstruction at different harmonic frequencies followed by their amplitude-weighted averaging prior to inversion. This results in compound maps of wave speed, which reveal variations in tissue elasticity in a tomographic fashion, i.e. an unmasked, slice-wise display of anatomical details at pixel-wise resolution. The method is demonstrated using MMRE data from the literature including abdominal and pelvic organs such as the liver, spleen, uterus body and uterus cervix. Even in small regions with low wave amplitudes, such as nucleus pulposus and spinal cord, elastic parameters consistent with literature values were obtained. Overall, the proposed method provides a simple and noise-robust strategy of in-plane wave analysis of MMRE data, with a pixel-wise resolution producing superior detail to MRE direct inversion methods.
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Affiliation(s)
- Heiko Tzschätzsch
- Department of Radiology, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany
| | - Jing Guo
- Department of Radiology, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany
| | - Florian Dittmann
- Department of Radiology, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany
| | - Sebastian Hirsch
- Department of Radiology, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany
| | - Eric Barnhill
- Department of Radiology, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany
| | - Korinna Jöhrens
- Institute of Pathology, Charité - Universitätsmedizin Berlin, Germany
| | - Jürgen Braun
- Institute of Medical Informatics, Charité - Universitätsmedizin Berlin, Germany
| | - Ingolf Sack
- Department of Radiology, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany.
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15
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Pepin KM, Ehman RL, McGee KP. Magnetic resonance elastography (MRE) in cancer: Technique, analysis, and applications. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2015; 90-91:32-48. [PMID: 26592944 PMCID: PMC4660259 DOI: 10.1016/j.pnmrs.2015.06.001] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2015] [Revised: 06/15/2015] [Accepted: 06/16/2015] [Indexed: 05/07/2023]
Abstract
Tissue mechanical properties are significantly altered with the development of cancer. Magnetic resonance elastography (MRE) is a noninvasive technique capable of quantifying tissue mechanical properties in vivo. This review describes the basic principles of MRE and introduces some of the many promising MRE methods that have been developed for the detection and characterization of cancer, evaluation of response to therapy, and investigation of the underlying mechanical mechanisms associated with malignancy.
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16
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Moradi M, Mahdavi SS, Nir G, Mohareri O, Koupparis A, Gagnon LO, Fazli L, Casey RG, Ischia J, Jones EC, Goldenberg SL, Salcudean SE. Multiparametric 3D in vivo ultrasound vibroelastography imaging of prostate cancer: Preliminary results. Med Phys 2015; 41:073505. [PMID: 24989419 DOI: 10.1118/1.4884226] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
PURPOSE Ultrasound-based solutions for diagnosis and prognosis of prostate cancer are highly desirable. The authors have devised a method for detecting prostate cancer using a vibroelastography (VE) system developed in our group and a tissue classification approach based on texture analysis of VE images. METHODS The VE method applies wide-band mechanical vibrations to the tissue. Here, the authors report on the use of this system for cancer detection and show that the texture of VE images characterized by the first and the second order statistics of the pixel intensities form a promising set of features for tissue typing to detect prostate cancer. The system was used to image patients prior to radical surgery. The removed specimens were sectioned and studied by an experienced histopathologist. The authors registered the whole-mount histology sections to the ultrasound images using an automatic registration algorithm. This enabled the quantitative evaluation of the performance of the authors' imaging method in cancer detection in an unbiased manner. The authors used support vector machine (SVM) classification to measure the cancer detection performance of the VE method. Regions of tissue of size 5 × 5 mm, labeled as cancer and noncancer based on automatic registration to histology slides, were classified using SVM. RESULTS The authors report an area under ROC of 0.81 ± 0.10 in cancer detection on 1066 tissue regions from 203 images. All cancer tumors in all zones were included in this analysis and were classified versus the noncancer tissue in the peripheral zone. This outcome was obtained in leave-one-patient-out validation. CONCLUSIONS The developed 3D prostate vibroelastography system and the proposed multiparametric approach based on statistical texture parameters from the VE images result in a promising cancer detection method.
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Affiliation(s)
- Mehdi Moradi
- University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada
| | - S Sara Mahdavi
- British Columbia Cancer Agency, Vancouver, British Columbia V5Z 4E6, Canada
| | - Guy Nir
- University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada
| | - Omid Mohareri
- University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada
| | - Anthony Koupparis
- Bristol Urological Institute, Brunel Building, Southmead Hospital, Bristol BS10 5NB, UK
| | | | - Ladan Fazli
- Vancouver Prostate Center, Vancouver, British Columbia V6H 3Z6, Canada
| | - Rowan G Casey
- Consultant Urologist, Essex Cancer Centre, Colchester University NHS Foundation Trust, Essex, CO62QL, UK
| | - Joseph Ischia
- University of Melbourne, Melbourne, Victoria 3010, Australia
| | - Edward C Jones
- Vancouver General Hospital, Vancouver, British Columbia V5Z 1M9, Canada
| | - S Larry Goldenberg
- Department of Urologic Sciences, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada
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Sahebjavaher RS, Nir G, Honarvar M, Gagnon LO, Ischia J, Jones EC, Chang SD, Fazli L, Goldenberg SL, Rohling R, Kozlowski P, Sinkus R, Salcudean SE. MR elastography of prostate cancer: quantitative comparison with histopathology and repeatability of methods. NMR IN BIOMEDICINE 2015; 28:124-139. [PMID: 25395244 DOI: 10.1002/nbm.3218] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2014] [Revised: 08/27/2014] [Accepted: 08/27/2014] [Indexed: 06/04/2023]
Abstract
The purpose of this work was to assess trans-perineal prostate magnetic resonance elastography (MRE) for (1) repeatability in phantoms/volunteers and (2) diagnostic power as correlated with histopathology in prostate cancer patients. The three-dimensional (3D) displacement field was obtained using a fractionally encoded gradient echo sequence using a custom-made transducer. The repeatability of the method was assessed based on three repeat studies and by changing the driving frequency by 3% in studies on a phantom and six healthy volunteers. Subsequently, 11 patients were examined with MRE prior to radical prostatectomy. The areas under the receiver operating characteristic curves were calculated using a windowed voxel-to-voxel approach by comparing the 2D registered slides, masked with the Gleason score. For the repeatability study, the average intraclass correlation coefficient for elasticity images was 99% for repeat phantom studies, 98% for ±6 Hz phantom studies, 95% for volunteer repeat studies with 2 min acquisition time, 82% for ±2 Hz volunteer studies with 2 min acquisition time and 73% for repeat volunteer studies with 8 min acquisition time. For the patient study, the average elasticity was 8.2 ± 1.7 kPa in the prostate capsule, 7.5 ± 1.9 kPa in the peripheral zone (PZ), 9.7 ± 3.0 kPa in the central gland (CG) and 9.0 ± 3.4 kPa in the transition zone. In the patient study, cancerous tissue with Gleason score at least 3 + 3 was significantly (p < 0.05) different from normal tissue in 10 out of 11 cases with tumors in the PZ, and 6 out of 9 cases with tumors in the CG. However, the overall case-averaged area under the curve was 0.72 in the PZ and 0.67 in the CG. Cancerous tissue was not always stiffer than normal tissue. The inversion algorithm was sensitive to (i) vibration amplitude and displacement nodes and (ii) misalignment of the 3D wave field due to subject movement.
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Affiliation(s)
- Ramin S Sahebjavaher
- University of British Columbia, Electrical and Computer Engineering, Vancouver, BC, Canada
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18
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Streitberger KJ, Reiss-Zimmermann M, Freimann FB, Bayerl S, Guo J, Arlt F, Wuerfel J, Braun J, Hoffmann KT, Sack I. High-resolution mechanical imaging of glioblastoma by multifrequency magnetic resonance elastography. PLoS One 2014; 9:e110588. [PMID: 25338072 PMCID: PMC4206430 DOI: 10.1371/journal.pone.0110588] [Citation(s) in RCA: 97] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2014] [Accepted: 09/17/2014] [Indexed: 12/14/2022] Open
Abstract
Objective To generate high-resolution maps of the viscoelastic properties of human brain parenchyma for presurgical quantitative assessment in glioblastoma (GB). Methods Twenty-two GB patients underwent routine presurgical work-up supplemented by additional multifrequency magnetic resonance elastography. Two three-dimensional viscoelastic parameter maps, magnitude |G*|, and phase angle φ of the complex shear modulus were reconstructed by inversion of full wave field data in 2-mm isotropic resolution at seven harmonic drive frequencies ranging from 30 to 60 Hz. Results Mechanical brain maps confirmed that GB are composed of stiff and soft compartments, resulting in high intratumor heterogeneity. GB could be easily differentiated from healthy reference tissue by their reduced viscous behavior quantified by φ (0.37±0.08 vs. 0.58±0.07). |G*|, which in solids more relates to the material's stiffness, was significantly reduced in GB with a mean value of 1.32±0.26 kPa compared to 1.54±0.27 kPa in healthy tissue (P = 0.001). However, some GB (5 of 22) showed increased stiffness. Conclusion GB are generally less viscous and softer than healthy brain parenchyma. Unrelated to the morphology-based contrast of standard magnetic resonance imaging, elastography provides an entirely new neuroradiological marker and contrast related to the biomechanical properties of tumors.
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Affiliation(s)
| | | | | | - Simon Bayerl
- Department of Neurosurgery, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Jing Guo
- Department of Radiology, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Felix Arlt
- Department of Neurosurgery, Universitätsmedizin Leipzig, Leipzig, Germany
| | - Jens Wuerfel
- Institute of Neuroradiology, Universitätsmedizin Göttingen, Göttingen, Germany
- NeuroCure, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Jürgen Braun
- Institute of Medical Informatics, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | | | - Ingolf Sack
- Department of Radiology, Charité - Universitätsmedizin Berlin, Berlin, Germany
- * E-mail:
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Petrov AY, Docherty PD, Sellier M, Chase JG. Multi-frequency inversion in Rayleigh damped Magnetic Resonance Elastography. Biomed Signal Process Control 2014. [DOI: 10.1016/j.bspc.2014.04.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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20
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Sahebjavaher RS, Frew S, Bylinskii A, ter Beek L, Garteiser P, Honarvar M, Sinkus R, Salcudean S. Prostate MR elastography with transperineal electromagnetic actuation and a fast fractionally encoded steady-state gradient echo sequence. NMR IN BIOMEDICINE 2014; 27:784-94. [PMID: 24764278 DOI: 10.1002/nbm.3118] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2013] [Revised: 03/14/2014] [Accepted: 03/18/2014] [Indexed: 05/16/2023]
Abstract
Our aim is to develop a clinically viable, fast-acquisition, prostate MR elastography (MRE) system with transperineal excitation. We developed a new actively shielded electromagnetic transducer, designed to enable quick deployment and positioning within the scanner. The shielding of the transducer was optimized using simulations. We also employed a new rapid pulse sequence that encodes the three-dimensional displacement field in the prostate gland using a fractionally encoded steady-state gradient echo sequence, thereby shortening the acquisition time to a clinically acceptable 8-10 min. The methods were tested in two phantoms and seven human subjects (six volunteers and one patient with prostate cancer). The MRE acquisition time for 24 slices, with an isotropic resolution of 2 mm and eight phase offsets, was 8 min, and the total scan, including positioning and set-up, was performed in 15-20 min. The phantom study demonstrated that the transducer does not interfere with the acquisition process and that it generates displacement amplitudes that exceed 100 µm even at frequencies as high as 300 Hz. In the in vivo human study, average wave amplitudes of 30 µm (46 µm at the apex) were routinely achieved within the prostate gland at 70 Hz. No pain or discomfort was reported. Results in a single patient suggest that MRE can identify cancer tumors, although this result is preliminary. The proposed methods allow the integration of prostate MRE with other multiparametric MRI methods. The results of this study clearly motivate the clinical evaluation of transperineal MRE in patients.
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21
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Reiss-Zimmermann M, Streitberger KJ, Sack I, Braun J, Arlt F, Fritzsch D, Hoffmann KT. High Resolution Imaging of Viscoelastic Properties of Intracranial Tumours by Multi-Frequency Magnetic Resonance Elastography. Clin Neuroradiol 2014; 25:371-8. [PMID: 24916129 DOI: 10.1007/s00062-014-0311-9] [Citation(s) in RCA: 67] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2014] [Accepted: 04/29/2014] [Indexed: 12/24/2022]
Abstract
PURPOSE In recent years Magnetic Resonance Elastography (MRE) emerged into a clinically applicable imaging technique. It has been shown that MRE is capable of measuring global changes of the viscoelastic properties of cerebral tissue. The purpose of our study was to evaluate a spatially resolved three-dimensional multi-frequent MRE (3DMMRE) for assessment of the viscoelastic properties of intracranial tumours. METHODS A total of 27 patients (63 ± 13 years) were included. All examinations were performed on a 3.0 T scanner, using a modified phase-contrast echo planar imaging sequence. We used 7 vibration frequencies in the low acoustic range with a temporal resolution of 8 dynamics per wave cycle. Post-processing included multi-frequency dual elasto-visco (MDEV) inversion to generate high-resolution maps of the magnitude |G*| and the phase angle φ of the complex valued shear modulus. RESULTS The tumour entities included in this study were: glioblastoma (n = 11), anaplastic astrocytoma (n = 3), meningioma (n = 7), cerebral metastasis (n = 5) and intracerebral abscess formation (n = 1). Primary brain tumours and cerebral metastases were not distinguishable in terms of |G*| and φ. Glioblastoma presented the largest range of |G*| values and a trend was delineable that glioblastoma were slightly softer than WHO grade III tumours. In terms of φ, meningiomas were clearly distinguishable from all other entities. CONCLUSIONS In this pilot study, while analysing the viscoelastic constants of various intracranial tumour entities with an improved spatial resolution, it was possible to characterize intracranial tumours by their mechanical properties. We were able to clearly delineate meningiomas from intraaxial tumours, while for the latter group an overlap remains in viscoelastic terms.
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Affiliation(s)
- M Reiss-Zimmermann
- Department of Neuroradiology, University of Leipzig, Liebigstr. 20, 04103, Leipzig, Germany.
| | - K-J Streitberger
- Department of Radiology, Charité-Universitätsmedizin Berlin, Charitéplatz 1, 10117, Berlin, Germany
| | - I Sack
- Department of Radiology, Charité-Universitätsmedizin Berlin, Charitéplatz 1, 10117, Berlin, Germany
| | - J Braun
- Department of Radiology, Charité-Universitätsmedizin Berlin, Charitéplatz 1, 10117, Berlin, Germany
| | - F Arlt
- Department of Neurosurgery, University of Leipzig, Liebigstr. 20, 04103, Leipzig, Germany
| | - D Fritzsch
- Department of Neuroradiology, University of Leipzig, Liebigstr. 20, 04103, Leipzig, Germany
| | - K-T Hoffmann
- Department of Neuroradiology, University of Leipzig, Liebigstr. 20, 04103, Leipzig, Germany
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22
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Nir G, Sahebjavaher RS, Sinkus R, Salcudean SE. A framework for optimization-based design of motion encoding in magnetic resonance elastography. Magn Reson Med 2014; 73:1514-25. [DOI: 10.1002/mrm.25280] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2013] [Revised: 03/19/2014] [Accepted: 04/13/2014] [Indexed: 01/22/2023]
Affiliation(s)
- Guy Nir
- Department of Electrical and Computer Engineering; University of British Columbia; Vancouver Canada
| | - Ramin S. Sahebjavaher
- Department of Electrical and Computer Engineering; University of British Columbia; Vancouver Canada
| | - Ralph Sinkus
- Division of Imaging Sciences and Biomedical Engineering; King's College London; London UK
| | - Septimiu E. Salcudean
- Department of Electrical and Computer Engineering; University of British Columbia; Vancouver Canada
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23
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Honarvar M, Sahebjavaher R, Sinkus R, Rohling R, Salcudean SE. Curl-Based Finite Element Reconstruction of the Shear Modulus Without Assuming Local Homogeneity: Time Harmonic Case. IEEE TRANSACTIONS ON MEDICAL IMAGING 2013; 32:2189-2199. [PMID: 23925367 DOI: 10.1109/tmi.2013.2276060] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
In elasticity imaging, the shear modulus is obtained from measured tissue displacement data by solving an inverse problem based on the wave equation describing the tissue motion. In most inversion approaches, the wave equation is simplified using local homogeneity and incompressibility assumptions. This causes a loss of accuracy and therefore imaging artifacts in the resulting elasticity images. In this paper we present a new curl-based finite element method inversion technique that does not rely upon these simplifying assumptions. As done in previous research, we use the curl operator to eliminate the dilatational term in the wave equation, but we do not make the assumption of local homogeneity. We evaluate our approach using simulation data from a virtual tissue phantom assuming time harmonic motion and linear, isotropic, elastic behavior of the tissue. We show that our reconstruction results are superior to those obtained using previous curl-based methods with homogeneity assumption. We also show that with our approach, in the 2-D case, multi-frequency measurements provide better results than single-frequency measurements. Experimental results from magnetic resonance elastography of a CIRS elastography phantom confirm our simulation results and further demonstrate, in a quantitative and repeatable manner, that our method is accurate and robust.
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24
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Lipp A, Trbojevic R, Paul F, Fehlner A, Hirsch S, Scheel M, Noack C, Braun J, Sack I. Cerebral magnetic resonance elastography in supranuclear palsy and idiopathic Parkinson's disease. NEUROIMAGE-CLINICAL 2013; 3:381-7. [PMID: 24273721 PMCID: PMC3814959 DOI: 10.1016/j.nicl.2013.09.006] [Citation(s) in RCA: 69] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/17/2013] [Revised: 07/18/2013] [Accepted: 09/12/2013] [Indexed: 12/23/2022]
Abstract
Detection and discrimination of neurodegenerative Parkinson syndromes are challenging clinical tasks and the use of standard T1- and T2-weighted cerebral magnetic resonance (MR) imaging is limited to exclude symptomatic Parkinsonism. We used a quantitative structural MR-based technique, MR-elastography (MRE), to assess viscoelastic properties of the brain, providing insights into altered tissue architecture in neurodegenerative diseases on a macroscopic level. We measured single-slice multifrequency MRE (MMRE) and three-dimensional MRE (3DMRE) in two neurodegenerative disorders with overlapping clinical presentation but different neuropathology — progressive supranuclear palsy (PSP: N = 16) and idiopathic Parkinson's disease (PD: N = 18) as well as in controls (N = 18). In PSP, both MMRE (Δμ = − 28.8%, Δα = − 4.9%) and 3DMRE (Δ|G*|: − 10.6%, Δφ: − 34.6%) were significantly reduced compared to controls, with a pronounced reduction within the lentiform nucleus (Δμ = − 34.6%, Δα = − 8.1%; Δ|G*|: − 7.8%, Δφ: − 44.8%). MRE in PD showed a comparable pattern, but overall reduction in brain elasticity was less severe reaching significance only in the lentiform nucleus (Δμ n.s., Δα = − 7.4%; Δ|G*|: − 6.9%, Δφ: n.s.). Beyond that, patients showed a close negative correlation between MRE constants and clinical severity. Our data indicate that brain viscoelasticity in PSP and PD is differently affected by the underlying neurodegeneration; whereas in PSP all MRE constants are reduced and changes in brain softness (reduced μ and |G*|) predominate those of viscosity (α and φ) in PD. We assessed brain viscoelasticity in neurodegenerative disorders by MR-elastography. Parameters of brain softness and viscosity are reduced in PSP, particularly in the lentiform nucleus. Reduction of viscoelasticity in Parkinson’s disease is less severe and limited to brain softness. Reduction of brain viscoelasticity is correlated with measures of clinical severity. Combination of MMRE and 3DMRE is a sensitive tool to quantify regional neurodegeneration.
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Affiliation(s)
- Axel Lipp
- Department of Neurology, Charité - University Medicine Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
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25
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Hirsch S, Guo J, Reiter R, Papazoglou S, Kroencke T, Braun J, Sack I. MR Elastography of the Liver and the Spleen Using a Piezoelectric Driver, Single-Shot Wave-Field Acquisition, and Multifrequency Dual Parameter Reconstruction. Magn Reson Med 2013; 71:267-77. [DOI: 10.1002/mrm.24674] [Citation(s) in RCA: 92] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2012] [Revised: 01/10/2013] [Accepted: 01/10/2013] [Indexed: 12/19/2022]
Affiliation(s)
- Sebastian Hirsch
- Department of Radiology; Charité-Universitätsmedizin Berlin, Campus Charité Mitte; Berlin Germany
| | - Jing Guo
- Department of Radiology; Charité-Universitätsmedizin Berlin, Campus Charité Mitte; Berlin Germany
| | - Rolf Reiter
- Department of Radiology; Charité-Universitätsmedizin Berlin, Campus Charité Mitte; Berlin Germany
| | - Sebastian Papazoglou
- Department of Radiology; Charité-Universitätsmedizin Berlin, Campus Charité Mitte; Berlin Germany
| | - Thomas Kroencke
- Department of Radiology; Charité-Universitätsmedizin Berlin, Campus Charité Mitte; Berlin Germany
| | - Juergen Braun
- Institute of Medical Informatics; Charité-Universitätsmedizin Berlin, Campus Benjamin Franklin; Berlin Germany
| | - Ingolf Sack
- Department of Radiology; Charité-Universitätsmedizin Berlin, Campus Charité Mitte; Berlin Germany
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26
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Magnetic resonance elastography reveals altered brain viscoelasticity in experimental autoimmune encephalomyelitis. NEUROIMAGE-CLINICAL 2012; 1:81-90. [PMID: 24179740 PMCID: PMC3757734 DOI: 10.1016/j.nicl.2012.09.003] [Citation(s) in RCA: 83] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/19/2012] [Revised: 08/24/2012] [Accepted: 09/01/2012] [Indexed: 12/29/2022]
Abstract
Cerebral magnetic resonance elastography (MRE) measures the viscoelastic properties of brain tissues in vivo. It was recently shown that brain viscoelasticity is reduced in patients with multiple sclerosis (MS), highlighting the potential of cerebral MRE to detect tissue pathology during neuroinflammation. To further investigate the relationship between inflammation and brain viscoelasticity, we applied MRE to a mouse model of MS, experimental autoimmune encephalomyelitis (EAE). EAE was induced and monitored by MRE in a 7-tesla animal MRI scanner over 4 weeks. At the peak of the disease (day 14 after immunization), we detected a significant decrease in both the storage modulus (G′) and the loss modulus (G″), indicating that both the elasticity and the viscosity of the brain are reduced during acute inflammation. Interestingly, these parameters normalized at a later time point (day 28) corresponding to the clinical recovery phase. Consistent with this, we observed a clear correlation between viscoelastic tissue alteration and the magnitude of perivascular T cell infiltration at both day 14 and day 28. Hence, acute neuroinflammation is associated with reduced mechanical cohesion of brain tissues. Moreover, the reduction of brain viscoelasticity appears to be a reversible process, which is restored when inflammation resolves. For the first time, our study has demonstrated the applicability of cerebral MRE in EAE, and showed that this novel imaging technology is highly sensitive to early tissue alterations resulting from the inflammatory processes. Thus, MRE may serve to monitor early stages of perivascular immune infiltration during neuroinflammation.
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Honarvar M, Sahebjavaher RS, Salcudean SE, Rohling R. Sparsity regularization in dynamic elastography. Phys Med Biol 2012; 57:5909-27. [DOI: 10.1088/0031-9155/57/19/5909] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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28
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Sahebjavaher RS, Baghani A, Honarvar M, Sinkus R, Salcudean SE. Transperineal prostate MR elastography: initial in vivo results. Magn Reson Med 2012; 69:411-20. [PMID: 22505273 DOI: 10.1002/mrm.24268] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2011] [Revised: 02/29/2012] [Accepted: 03/01/2012] [Indexed: 12/30/2022]
Abstract
This article presents a new approach to magnetic resonance elastography of the prostate using transperineal mechanical excitation. This approach is validated using a prostate elasticity phantom and in vivo studies of healthy volunteers. It is demonstrated that the transperineal approach can generate shear wave amplitudes on the order of 6-30 μm in the mid-gland region. The driver was implemented using an electromagnetic actuator with a hydraulic transmission system. The magnetic resonance elastography acquisition time has been reduced significantly by using a "second harmonic" approach. Displacement fields are processed using the established three-dimensional local frequency estimation algorithm. The three-dimensional curl-based direct inversion was used to calculate the local wavelength. The traveling wave expansion algorithm was used to reconstruct the wave damping image for one case. Using the proposed method, it was possible to resolve lesions of 0.5 cc in the phantom study. Repeatability experiments were performed and analyzed. The results from this study indicate that transperineal magnetic resonance elastography--without an endorectal coil--is a suitable candidate for a patient study involving multiparametric magnetic resonance imaging of prostate cancer, where magnetic resonance elastography may provide additional information for improved diagnosis and image-based surveillance.
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Affiliation(s)
- Ramin S Sahebjavaher
- Department of Electrical and Computer Engineering, University of British Columbia, Vancouver, British Columbia, Canada V6T 1Z4.
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29
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Papazoglou S, Hirsch S, Braun J, Sack I. Multifrequency inversion in magnetic resonance elastography. Phys Med Biol 2012; 57:2329-46. [PMID: 22460134 DOI: 10.1088/0031-9155/57/8/2329] [Citation(s) in RCA: 80] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Time-harmonic shear wave elastography is capable of measuring viscoelastic parameters in living tissue. However, finite tissue boundaries and waveguide effects give rise to wave interferences which are not accounted for by standard elasticity reconstruction methods. Furthermore, the viscoelasticity of tissue causes dispersion of the complex shear modulus, rendering the recovered moduli frequency dependent. Therefore, we here propose the use of multifrequency wave data from magnetic resonance elastography (MRE) for solving the inverse problem of viscoelasticity reconstruction by an algebraic least-squares solution based on the springpot model. Advantages of the method are twofold: (i) amplitude nulls appearing in single-frequency standing wave patterns are mitigated and (ii) the dispersion of storage and loss modulus with drive frequency is taken into account by the inversion procedure, thereby avoiding subsequent model fitting. As a result, multifrequency inversion produces fewer artifacts in the viscoelastic parameter map than standard single-frequency parameter recovery and may thus support image-based viscoelasticity measurement. The feasibility of the method is demonstrated by simulated wave data and MRE experiments on a phantom and in vivo human brain. Implemented as a clinical method, multifrequency inversion may improve the diagnostic value of time-harmonic MRE in a large variety of applications.
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Affiliation(s)
- Sebastian Papazoglou
- Department of Radiology, Charité-Universitätsmedizin Berlin, Campus Mitte, Berlin, Germany
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Schneider C, Baghani A, Rohling R, Salcudean S. Remote ultrasound palpation for robotic interventions using absolute elastography. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION : MICCAI ... INTERNATIONAL CONFERENCE ON MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION 2012; 15:42-9. [PMID: 23285533 DOI: 10.1007/978-3-642-33415-3_6] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Although robotic surgery has addressed many of the challenges presented by minimally invasive surgery, haptic feedback and the lack of knowledge of tissue stiffness is an unsolved problem. This paper presents a system for finding the absolute elastic properties of tissue using a freehand ultrasound scanning technique, which utilizes the da Vinci Surgical robot and a custom 2D ultrasound transducer for intraoperative use. An external exciter creates shear waves in the tissue, and a local frequency estimation method computes the shear modulus. Results are reported for both phantom and in vivo models. This system can be extended to any 6 degree-of-freedom tracking method and any 2D transducer to provide real-time absolute elastic properties of tissue.
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Affiliation(s)
- Caitlin Schneider
- Department of Electrical and Computer Engineering, University of British Columbia, Vancouver, BC, Canada
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Real-Time Quantitative Elasticity Imaging of Deep Tissue Using Free-Hand Conventional Ultrasound. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION – MICCAI 2012 2012; 15:617-24. [DOI: 10.1007/978-3-642-33418-4_76] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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32
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Biomechanical Modeling of the Prostate for Procedure Guidance and Simulation. STUDIES IN MECHANOBIOLOGY, TISSUE ENGINEERING AND BIOMATERIALS 2012. [DOI: 10.1007/8415_2012_121] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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