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Lu J, Millioz F, Varray F, Poree J, Provost J, Bernard O, Garcia D, Friboulet D. Ultrafast Cardiac Imaging Using Deep Learning for Speckle-Tracking Echocardiography. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2023; 70:1761-1772. [PMID: 37862280 DOI: 10.1109/tuffc.2023.3326377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2023]
Abstract
High-quality ultrafast ultrasound imaging is based on coherent compounding from multiple transmissions of plane waves (PW) or diverging waves (DW). However, compounding results in reduced frame rate, as well as destructive interferences from high-velocity tissue motion if motion compensation (MoCo) is not considered. While many studies have recently shown the interest of deep learning for the reconstruction of high-quality static images from PW or DW, its ability to achieve such performance while maintaining the capability of tracking cardiac motion has yet to be assessed. In this article, we addressed such issue by deploying a complex-weighted convolutional neural network (CNN) for image reconstruction and a state-of-the-art speckle-tracking method. The evaluation of this approach was first performed by designing an adapted simulation framework, which provides specific reference data, i.e., high-quality, motion artifact-free cardiac images. The obtained results showed that, while using only three DWs as input, the CNN-based approach yielded an image quality and a motion accuracy equivalent to those obtained by compounding 31 DWs free of motion artifacts. The performance was then further evaluated on nonsimulated, experimental in vitro data, using a spinning disk phantom. This experiment demonstrated that our approach yielded high-quality image reconstruction and motion estimation, under a large range of velocities and outperforms a state-of-the-art MoCo-based approach at high velocities. Our method was finally assessed on in vivo datasets and showed consistent improvement in image quality and motion estimation compared to standard compounding. This demonstrates the feasibility and effectiveness of deep learning reconstruction for ultrafast speckle-tracking echocardiography.
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Chen Y, Zhuang Z, Luo J, Luo X. Doppler and Pair-Wise Optical Flow Constrained 3D Motion Compensation for 3D Ultrasound Imaging. IEEE TRANSACTIONS ON IMAGE PROCESSING : A PUBLICATION OF THE IEEE SIGNAL PROCESSING SOCIETY 2023; 32:4501-4516. [PMID: 37540607 DOI: 10.1109/tip.2023.3300591] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/06/2023]
Abstract
Volumetric (3D) ultrasound imaging using a 2D matrix array probe is increasingly developed for various clinical procedures. However, 3D ultrasound imaging suffers from motion artifacts due to tissue motions and a relatively low frame rate. Current Doppler-based motion compensation (MoCo) methods only allow 1D compensation in the in-range dimension. In this work, we propose a new 3D-MoCo framework that combines 3D velocity field estimation and a two-step compensation strategy for 3D diverging wave compounding imaging. Specifically, our framework explores two constraints of a round-trip scan sequence of 3D diverging waves, i.e., Doppler and pair-wise optical flow, to formulate the estimation of the 3D velocity fields as a global optimization problem, which is further regularized by the divergence-free and first-order smoothness. The two-step compensation strategy is to first compensate for the 1D displacements in the in-range dimension and then the 2D displacements in the two mutually orthogonal cross-range dimensions. Systematical in-silico experiments were conducted to validate the effectiveness of our proposed 3D-MoCo method. The results demonstrate that our 3D-MoCo method achieves higher image contrast, higher structural similarity, and better speckle patterns than the corresponding 1D-MoCo method. Particularly, the 2D cross-range compensation is effective for fully recovering image quality.
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Wang D, Chayer B, Destrempes F, Poree J, Cardinal MHR, Tournoux F, Cloutier G. Ultrafast Myocardial Principal Strain Ultrasound Elastography During Stress Tests: In Vitro Validation and In Vivo Feasibility. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2022; 69:3284-3296. [PMID: 36269911 DOI: 10.1109/tuffc.2022.3216447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Objective myocardial contractility assessment during stress tests aims to improve the diagnosis of myocardial ischemia. Tissue Doppler imaging (TDI) or optical flow (OF) speckle tracking echocardiography (STE) has been used to quantify myocardial contractility at rest. However, this is more challenging during stress tests due to image decorrelation at high heart rates. Moreover, stress tests imply a high frame rate which leads to a limited lateral field of view. Therefore, a large lateral field-of-view robust ultrafast myocardial regularized OF-TDI principal strain estimator has been developed for high-frame-rate echocardiography of coherently compounded transmitted diverging waves. The feasibility and accuracy of the proposed estimator were validated in vitro (using sonomicrometry as the gold standard) and in vivo stress experiments. Compared with OF strain imaging, the proposed estimator improved the accuracy of principal major and minor strains during stress tests, with an average contrast-to-noise ratio improvement of 4.4 ± 2.7 dB ( p -value < 0.01). Moreover, there was a significant correlation and a very close agreement between the proposed estimator and sonomicrometry for tested heart rates between 60 and 180 beats per minute (bpm). The averages ± standard deviations (STD) of R2 and biases ± STD between them were 0.96 ± 0.04 ( p -value < 0.01) and 0.01 ± 0.03% in the axial direction, respectively; and 0.94 ± 0.02 ( p -value < 0.01) and 0.04 ± 0.06% in the lateral direction, respectively. These results suggest that the proposed estimator could be useful clinically to provide an accurate and quantitative 2-D large lateral field-of-view myocardial strain assessment at high heart rates during stress echocardiography.
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Orlowska M, Bézy S, Ramalli A, Voigt JU, D'hooge J. High-Frame-Rate Speckle Tracking for Echocardiographic Stress Testing. ULTRASOUND IN MEDICINE & BIOLOGY 2022; 48:1644-1651. [PMID: 35637027 DOI: 10.1016/j.ultrasmedbio.2022.04.009] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2021] [Revised: 01/21/2022] [Accepted: 04/20/2022] [Indexed: 06/15/2023]
Abstract
Stress echocardiography helps to diagnose cardiac diseases that cannot easily be detected or do not even manifest at rest. In clinical practice, assessment of the stress test is usually performed visually and, therefore, in a qualitative and subjective way. Although speckle tracking echocardiography (STE) has been proposed for the quantification of function during stress, its time resolution is inadequate at high heart rates. Recently, high-frame-rate (HFR) imaging approaches have been proposed together with dedicated STE algorithms capable of handling small interframe displacements. The aim of this study was to determine if HFR STE is effective in assessing strain and strain rate parameters during echocardiographic stress testing. Specifically, stress echocardiography, at four different workload intensities, was performed in 25 healthy volunteers. At each stress level, HFR images from the apical four-chamber view were recorded using the ULA-OP 256 experimental scanner. Then, the myocardium was tracked with HFR STE, and strain and strain rate biomarkers were extracted to further analyze systolic and diastolic (early and late) peaks, as well as a short-lived isovolumic relaxation peak during stress testing. The global systolic strain response was monophasic, revealing a significant (p < 0.001) increase at low stress but then reaching a plateau. In contrast, all strain rate indices linearly increased (p < 0.001) with increasing stress level. These findings are in line with those reported using tissue Doppler imaging and, thus, indicate that HFR STE can be a useful tool in assessing cardiac function during stress echocardiography.
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Affiliation(s)
- Marta Orlowska
- Laboratory of Cardiovascular Imaging and Dynamics, Department of Cardiovascular Sciences, Katholieke Universiteit Leuven, Leuven, Belgium.
| | - Stéphanie Bézy
- Laboratory of Cardiovascular Imaging and Dynamics, Department of Cardiovascular Sciences, Katholieke Universiteit Leuven, Leuven, Belgium
| | - Alessandro Ramalli
- Department of Information Engineering, University of Florence, Florence, Italy
| | - Jens-Uwe Voigt
- Laboratory of Cardiovascular Imaging and Dynamics, Department of Cardiovascular Sciences, Katholieke Universiteit Leuven, Leuven, Belgium
| | - Jan D'hooge
- Laboratory of Cardiovascular Imaging and Dynamics, Department of Cardiovascular Sciences, Katholieke Universiteit Leuven, Leuven, Belgium
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Vixège F, Berod A, Courand PY, Mendez S, Nicoud F, Blanc-Benon P, Vray D, Garcia D. Full-volume three-component intraventricular vector flow mapping by triplane color Doppler. Phys Med Biol 2022; 67. [DOI: 10.1088/1361-6560/ac62fe] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2022] [Accepted: 03/31/2022] [Indexed: 11/11/2022]
Abstract
Abstract
Objective. Intraventricular vector flow mapping (iVFM) is a velocimetric technique for retrieving two-dimensional velocity vector fields of blood flow in the left ventricular cavity. This method is based on conventional color Doppler imaging, which makes iVFM compatible with the clinical setting. We have generalized the iVFM for a three-dimensional reconstruction (3D-iVFM). Approach. 3D-iVFM is able to recover three-component velocity vector fields in a full intraventricular volume by using a clinical echocardiographic triplane mode. The 3D-iVFM problem was written in the spherical (radial, polar, azimuthal) coordinate system associated to the six half-planes produced by the triplane mode. As with the 2D version, the method is based on the mass conservation, and free-slip boundary conditions on the endocardial wall. These mechanical constraints were imposed in a least-squares minimization problem that was solved through the method of Lagrange multipliers. We validated 3D-iVFM in silico in a patient-specific CFD (computational fluid dynamics) model of cardiac flow and tested its clinical feasibility in vivo in patients and in one volunteer. Main results. The radial and polar components of the velocity were recovered satisfactorily in the CFD setup (correlation coefficients,
r
= 0.99 and 0.78). The azimuthal components were estimated with larger errors (
r
= 0.57) as only six samples were available in this direction. In both in silico and in vivo investigations, the dynamics of the intraventricular vortex that forms during diastole was deciphered by 3D-iVFM. In particular, the CFD results showed that the mean vorticity can be estimated accurately by 3D-iVFM. Significance. Our results tend to indicate that 3D-iVFM could provide full-volume echocardiographic information on left intraventricular hemodynamics from the clinical modality of triplane color Doppler.
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Wang D, Chayer B, Destrempes F, Gesnik M, Tournoux F, Cloutier G. Deformability of ascending thoracic aorta aneurysms assessed using ultrafast ultrasound and a principal strain estimator: In vitro evaluation and in vivo feasibility. Med Phys 2022; 49:1759-1775. [PMID: 35045186 DOI: 10.1002/mp.15464] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Revised: 12/23/2021] [Accepted: 12/24/2021] [Indexed: 11/06/2022] Open
Abstract
BACKGROUND Noninvasive vascular strain imaging under conventional line-by-line scanning has a low frame rate and lateral resolution, and depends on the coordinate system. It is thus affected by high deformations due to image decorrelation between frames. PURPOSE To develop an ultrafast time-ensemble regularized tissue-Doppler optical-flow principal strain estimator for aorta deformability assessment in a long-axis view. METHODS This approach alleviated the impact of lateral resolution using image compounding and that of the coordinate system dependency using principal strain. Accuracy and feasibility were evaluated in two aorta-mimicking phantoms first, and then in four age-matched individuals with either a normal aorta or a pathological ascending thoracic aorta aneurysm (TAA). RESULTS Instantaneous aortic maximum and minimum principal strain maps and regional accumulated strains during each cardiac cycle were estimated at systolic and diastolic phases to characterize the normal aorta and TAA. In vitro, principal strain results matched sonomicrometry measurements. In vivo, a significant decrease in maximum and minimum principal strains was observed in TAA cases, whose range was respectively 7.9 ± 6.4% and 8.2 ± 2.6% smaller than in normal aortas. CONCLUSIONS The proposed principal strain estimator showed an ability to potentially assess TAA deformability, which may provide an individualized and reliable evaluation method for TAA rupture risk assessment. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Diya Wang
- School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, 71049, P. R. China.,Laboratory of Biorheology and Medical Ultrasonics, Research Center, University of Montreal Hospital, Montreal, QC, H2×0A9, Canada
| | - Boris Chayer
- Laboratory of Biorheology and Medical Ultrasonics, Research Center, University of Montreal Hospital, Montreal, QC, H2×0A9, Canada
| | - François Destrempes
- Laboratory of Biorheology and Medical Ultrasonics, Research Center, University of Montreal Hospital, Montreal, QC, H2×0A9, Canada
| | - Marc Gesnik
- Laboratory of Biorheology and Medical Ultrasonics, Research Center, University of Montreal Hospital, Montreal, QC, H2×0A9, Canada
| | - François Tournoux
- Laboratory of Biorheology and Medical Ultrasonics, Research Center, University of Montreal Hospital, Montreal, QC, H2×0A9, Canada.,Department of Cardiology, Echocardiography Laboratory, University of Montreal Hospital, Montreal, QC, H2×0A9, Canada
| | - Guy Cloutier
- Laboratory of Biorheology and Medical Ultrasonics, Research Center, University of Montreal Hospital, Montreal, QC, H2×0A9, Canada.,Department of Radiology, Radio-Oncology and Nuclear Medicine, and Institute of Biomedical Engineering, University of Montreal, Montreal, QC, H3C 3J7, Canada
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Bharadwaj S, Prasad S, Almekkawy M. An Upgraded Siamese Neural Network for Motion Tracking in Ultrasound Image Sequences. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2021; 68:3515-3527. [PMID: 34232873 DOI: 10.1109/tuffc.2021.3095299] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Deep learning is heavily being borrowed to solve problems in medical imaging applications, and Siamese neural networks are the front runners of motion tracking. In this article, we propose to upgrade one such Siamese architecture-based neural network for robust and accurate landmark tracking in ultrasound images to improve the quality of image-guided radiation therapy. Although several researchers have improved the Siamese architecture-based networks with sophisticated detection modules and by incorporating transfer learning, the inherent assumptions of the constant position model and the missing motion model remain unaddressed limitations. In our proposed model, we overcome these limitations by introducing two modules into the original architecture. We employ a reference template update to resolve the constant position model and a linear Kalman filter (LKF) to address the missing motion model. Moreover, we demonstrate that the proposed architecture provides promising results without transfer learning. The proposed model was submitted to an open challenge organized by MICCAI and was evaluated exhaustively on the Liver US Tracking (CLUST) 2D dataset. Experimental results proved that the proposed model tracked the landmarks with promising accuracy. Furthermore, we also induced synthetic occlusions to perform a qualitative analysis of the proposed approach. The evaluations were performed on the training set of the CLUST 2D dataset. The proposed method outperformed the original Siamese architecture by a significant margin.
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Cormier P, Poree J, Bourquin C, Provost J. Dynamic Myocardial Ultrasound Localization Angiography. IEEE TRANSACTIONS ON MEDICAL IMAGING 2021; 40:3379-3388. [PMID: 34086566 DOI: 10.1109/tmi.2021.3086115] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Dynamic Myocardial Ultrasound Localization Angiography (MULA) is an ultrasound-based imaging modality destined to enhance the diagnosis and treatment monitoring of coronary pathologies. Current diagnosis methods of coronary artery disease focus on the observation of vessel narrowing in the coronary vasculature to assess the organ's condition. However, we would strongly benefit from mapping and measuring flow from intramyocardial arterioles and capillaries as they are the direct vehicle of the myocardium blood income. With the advent of ultrafast ultrasound scanners, imaging modalities based on the localization and tracking of injected microbubbles allow for the subwavelength resolution imaging of an organ's vasculature. Yet, the application of these vascular imaging modalities relies on an accumulation of cine loops of a region of interest undergoing no or minimal tissue motion. This work introduces the MULA framework that combines 1) the mapping of the dynamics of the microvascular flow using an ultrasound sequence triggered by the electrocardiogram with a 2) novel Lagrangian beamformer based on non-rigid motion registration algorithm to form images directly in the myocardium's material coordinates and thus correcting for the large myocardial motion and deformation. Specifically, we show that this framework enables the non-invasive imaging of the angioarchitecture and dynamics of intramyocardial flow in vessels as small as a few tens of microns in the rat's beating heart in vivo.
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Poree J, Goudot G, Pedreira O, Laborie E, Khider L, Mirault T, Messas E, Julia P, Alsac JM, Tanter M, Pernot M. Dealiasing High-Frame-Rate Color Doppler Using Dual-Wavelength Processing. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2021; 68:2117-2128. [PMID: 33534706 DOI: 10.1109/tuffc.2021.3056932] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Doppler ultrasound is the premier modality to analyze blood flow dynamics in clinical practice. With conventional systems, Doppler can either provide a time-resolved quantification of the flow dynamics in sample volumes (spectral Doppler) or an average Doppler velocity/power [color flow imaging (CFI)] in a wide field of view (FOV) but with a limited frame rate. The recent development of ultrafast parallel systems made it possible to evaluate simultaneously color, power, and spectral Doppler in a wide FOV and at high-frame rates but at the expense of signal-to-noise ratio (SNR). However, like conventional Doppler, ultrafast Doppler is subject to aliasing for large velocities and/or large depths. In a recent study, staggered multi-pulse repetition frequency (PRF) sequences were investigated to dealias color-Doppler images. In this work, we exploit the broadband nature of pulse-echo ultrasound and propose a dual-wavelength approach for CFI dealiasing with a constant PRF. We tested the dual-wavelength bandpass processing, in silico, in laminar flow phantom and validated it in vivo in human carotid arteries ( n = 25 ). The in silico results showed that the Nyquist velocity could be extended up to four times the theoretical limit. In vivo, dealiased CFI were highly consistent with unfolded Spectral Doppler ( r2=0.83 , y=1.1x+0.1 , N=25 ) and provided consistent vector flow images. Our results demonstrate that dual-wavelength processing is an efficient method for high-velocity CFI.
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Orlowska M, Ramalli A, Bezy S, Meacci V, Voigt JU, D'Hooge J. In Vivo Comparison of Multiline Transmission and Diverging Wave Imaging for High-Frame-Rate Speckle-Tracking Echocardiography. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2021; 68:1511-1520. [PMID: 33170777 DOI: 10.1109/tuffc.2020.3037043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
High-frame-rate (HFR) speckle-tracking echocardiography (STE) assesses myocardial function by quantifying motion and deformation at high temporal resolution. Among the proposed HFR techniques, multiline transmission (MLT) and diverging wave (DW) imaging have been used in this context both being characterized by specific advantages and disadvantages. Therefore, in this article, we directly contrast both approaches in an in vivo setting while operating at the same frame rate (FR). First, images were recorded at baseline (resting condition) from healthy volunteers and patients. Next, additional acquisitions during stress echocardiography were performed on volunteers. Each scan was contoured and processed by a previously proposed 2-D HFR STE algorithm based on cross correlation. Then, strain curves and their end-systolic (ES) values were extracted for all myocardial segments for further statistical analysis. The baseline acquisitions did not reveal differences in estimated strain between the acquisition modes ( ); myocardial segments ( ); or an interaction between imaging mode and depth ( ). Similarly, during stress testing, no difference ( p = 0.7 ) was observed for the two scan sequences, stress levels or an interaction sequence-stress level ( p = 0.94 ). Overall, our findings show that MLT and DW compoundings give comparable HFR STE strain values and that the choice for using one method or the other may thus rather be based on other factors, for example, system requirements or computational cost.
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Perrot V, Polichetti M, Varray F, Garcia D. So you think you can DAS? A viewpoint on delay-and-sum beamforming. ULTRASONICS 2021; 111:106309. [PMID: 33360053 DOI: 10.1016/j.ultras.2020.106309] [Citation(s) in RCA: 74] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Revised: 10/29/2020] [Accepted: 11/19/2020] [Indexed: 06/12/2023]
Abstract
Delay-and-sum (DAS) is the most widespread digital beamformer in high-frame-rate ultrasound imaging. Its implementation is simple and compatible with real-time applications. In this viewpoint article, we describe the fundamentals of DAS beamforming. The underlying theory and numerical approach are detailed so that users can be aware of its functioning and limitations. In particular, we discuss the importance of the f-number and speed of sound on image quality, and propose one solution to set their values from a physical viewpoint. We suggest determining the f-number from the directivity of the transducer elements and the speed of sound from the phase dispersion of the delayed signals. Simplified Matlab codes are provided for the sake of clarity and openness. The effect of the f-number and speed of sound on the lateral resolution and contrast-to-noise ratio was investigated in vitro and in vivo. If not properly preset, these two factors had a substantial negative impact on standard metrics of image quality (namely CNR and FWHM). When beamforming with DAS in vitro or in vivo, it is recommended to optimize these parameters in order to use it wisely and prevent image degradation.
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Affiliation(s)
- Vincent Perrot
- CREATIS, CNRS UMR 5220, INSERM U1206, Université Lyon 1, INSA Lyon, France
| | - Maxime Polichetti
- CREATIS, CNRS UMR 5220, INSERM U1206, Université Lyon 1, INSA Lyon, France
| | - François Varray
- CREATIS, CNRS UMR 5220, INSERM U1206, Université Lyon 1, INSA Lyon, France
| | - Damien Garcia
- CREATIS, CNRS UMR 5220, INSERM U1206, Université Lyon 1, INSA Lyon, France.
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Lu J, Millioz F, Garcia D, Salles S, Liu W, Friboulet D. Reconstruction for Diverging-Wave Imaging Using Deep Convolutional Neural Networks. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2020; 67:2481-2492. [PMID: 32286972 DOI: 10.1109/tuffc.2020.2986166] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
In recent years, diverging wave (DW) ultrasound imaging has become a very promising methodology for cardiovascular imaging due to its high temporal resolution. However, if they are limited in number, DW transmits provide lower image quality compared with classical focused schemes. A conventional reconstruction approach consists in summing series of ultrasound signals coherently, at the expense of frame rate, data volume, and computation time. To deal with this limitation, we propose a convolutional neural network (CNN) architecture, Inception for DW Network (IDNet), for high-quality reconstruction of DW ultrasound images using a small number of transmissions. In order to cope with the specificities induced by the sectorial geometry associated with DW imaging, we adopted the inception model composed of the concatenation of multiscale convolution kernels. Incorporating inception modules aims at capturing different image features with multiscale receptive fields. A mapping between low-quality images and corresponding high-quality compounded reconstruction was learned by training the network using in vitro and in vivo samples. The performance of the proposed approach was evaluated in terms of contrast ratio (CR), contrast-to-noise ratio (CNR), and lateral resolution (LR), and compared with standard compounding method and conventional CNN methods. The results demonstrated that our method could produce high-quality images using only 3 DWs, yielding an image quality equivalent to that obtained with compounding of 31 DWs and outperforming more conventional CNN architectures in terms of complexity, inference time, and image quality.
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Li H, Poree J, Chayer B, Cardinal MHR, Cloutier G. Parameterized Strain Estimation for Vascular Ultrasound Elastography With Sparse Representation. IEEE TRANSACTIONS ON MEDICAL IMAGING 2020; 39:3788-3800. [PMID: 32746123 DOI: 10.1109/tmi.2020.3005017] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Ultrasound vascular strain imaging has shown its potential to interrogate the motion of the vessel wall induced by the cardiac pulsation for predicting plaque instability. In this study, a sparse model strain estimator (SMSE) is proposed to reconstruct a dense strain field at a high resolution, with no spatial derivatives, and a high computation efficiency. This sparse model utilizes the highly-compacted property of discrete cosine transform (DCT) coefficients, thereby allowing to parameterize displacement and strain fields with truncated DCT coefficients. The derivation of affine strain components (axial and lateral strains and shears) was reformulated into solving truncated DCT coefficients and then reconstructed with them. Moreover, an analytical solution was derived to reduce estimation time. With simulations, the SMSE reduced estimation errors by up to 50% compared with the state-of-the-art window-based Lagrangian speckle model estimator (LSME). The SMSE was also proven to be more robust than the LSME against global and local noise. For in vitro and in vivo tests, residual strains assessing cumulated errors with the SMSE were 2 to 3 times lower than with the LSME. Regarding computation efficiency, the processing time of the SMSE was reduced by 4 to 25 times compared with the LSME, according to simulations, in vitro and in vivo results. Finally, phantom studies demonstrated the enhanced spatial resolution of the proposed SMSE algorithm against LSME.
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Andersen MS, Moore C, LeFevre M, Arges K, Friedman DJ, Atwater BD, Kisslo J, Søgaard P, Struijk JJ, von Ramm OT, Schmidt SE. Contractile Fronts In The Interventricular Septum: A Case For High Frame Rate Echocardiographic Imaging. ULTRASOUND IN MEDICINE & BIOLOGY 2020; 46:2181-2192. [PMID: 32561068 DOI: 10.1016/j.ultrasmedbio.2020.04.028] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2019] [Revised: 04/22/2020] [Accepted: 04/24/2020] [Indexed: 06/11/2023]
Abstract
The real time high frame rate (HFR) 2-dimensional ultrasound system, T5, at Duke University is capable of imaging at up to 1000 images per second for adult cardiac imaging. A method for detecting and visualizing the mechanical contraction fronts using HFR echocardioagraphy-derived Strain Rate Image (SRI) was described in 26 patients. The Tissue Shortening Onset front durations for echocardiographic normal patients were significantly shorter than conduction disorder patients with left bundle branch block (LBBB) with intrinsic conduction and conduction disorder patients without LBBB (non-LBBB) with simulated LBBB (sLBBB). Echocardiographic normal patients had significantly higher correlation coefficients between their SRIs and spatially inverted versions of themselves compared to non-LBBB patients with intrinsic conduction and sLBBB. In conclusion, SRIs could spatially resolve contractile event fronts in patients.
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Affiliation(s)
| | | | | | | | | | | | - Joseph Kisslo
- Duke University Medical Center, Durham, NC 27710, USA
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15
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Wei S, Kang JU. Optical flow optical coherence tomography for determining accurate velocity fields. OPTICS EXPRESS 2020; 28:25502-25527. [PMID: 32907070 DOI: 10.1364/oe.396708] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Accepted: 07/26/2020] [Indexed: 05/18/2023]
Abstract
Determining micron-scale fluid flow velocities using optical coherence tomography (OCT) is important in both biomedical research and clinical diagnosis. Numerous methods have been explored to quantify the flow information, which can be divided into either phase-based or amplitude-based methods. However, phase-based methods, such as Doppler methods, are less sensitive to transverse velocity components and suffer from wrapped phase and phase instability problems for axial velocity components. On the other hand, amplitude-based methods, such as speckle variance OCT, correlation mapping OCT and split-spectrum amplitude-decorrelation angiography, focus more on segmenting flow areas than quantifying flow velocities. In this paper, we propose optical flow OCT (OFOCT) to quantify accurate velocity fields. The equivalence between optical flow and real velocity fields is validated in OCT imaging. The sensitivity fall-off of a Fourier-domain OCT (FDOCT) system is considered in the modified optical flow continuity constraint. Spatial-temporal smoothness constraints are used to make the optical flow problem well-posed and reduce noises in the velocity fields. An iteration solution to the optical flow problem is implemented in a graphics processing unit (GPU) for real-time processing. The accuracy of the velocity fields is verified through phantom flow experiments by using a diluted milk powder solution as a scattering medium. Velocity fields are then used to detect flow turbulence and reconstruct flow trajectory. The results show that OFOCT is accurate in determining velocity fields and applicable to research concerning fluid dynamics.
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Azarmehr N, Ye X, Howes JD, Docking B, Howard JP, Francis DP, Zolgharni M. An optimisation-based iterative approach for speckle tracking echocardiography. Med Biol Eng Comput 2020; 58:1309-1323. [PMID: 32253607 PMCID: PMC7211789 DOI: 10.1007/s11517-020-02142-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Accepted: 02/11/2020] [Indexed: 11/17/2022]
Abstract
Speckle tracking is the most prominent technique used to estimate the regional movement of the heart based on echocardiograms. In this study, we propose an optimised-based block matching algorithm to perform speckle tracking iteratively. The proposed technique was evaluated using a publicly available synthetic echocardiographic dataset with known ground-truth from several major vendors and for healthy/ischaemic cases. The results were compared with the results from the classic (standard) two-dimensional block matching. The proposed method presented an average displacement error of 0.57 pixels, while classic block matching provided an average error of 1.15 pixels. When estimating the segmental/regional longitudinal strain in healthy cases, the proposed method, with an average of 0.32 ± 0.53, outperformed the classic counterpart, with an average of 3.43 ± 2.84. A similar superior performance was observed in ischaemic cases. This method does not require any additional ad hoc filtering process. Therefore, it can potentially help to reduce the variability in the strain measurements caused by various post-processing techniques applied by different implementations of the speckle tracking. Graphical Abstract Standard block matching versus proposed iterative block matching approach.
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Affiliation(s)
- Neda Azarmehr
- School of Computer Science, University of Lincoln, Lincoln, UK
- National Heart and Lung Institute, Imperial College London, London, UK
| | - Xujiong Ye
- School of Computer Science, University of Lincoln, Lincoln, UK
| | - Joseph D. Howes
- School of Computer Science, University of Lincoln, Lincoln, UK
| | | | - James P. Howard
- National Heart and Lung Institute, Imperial College London, London, UK
| | - Darrel P. Francis
- National Heart and Lung Institute, Imperial College London, London, UK
| | - Massoud Zolgharni
- National Heart and Lung Institute, Imperial College London, London, UK
- School of Computing and Engineering, University of West London, London, UK
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17
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Voorneveld J, Saaid H, Schinkel C, Radeljic N, Lippe B, Gijsen FJH, van der Steen AFW, de Jong N, Claessens T, Vos HJ, Kenjeres S, Bosch JG. 4-D Echo-Particle Image Velocimetry in a Left Ventricular Phantom. ULTRASOUND IN MEDICINE & BIOLOGY 2020; 46:805-817. [PMID: 31924419 DOI: 10.1016/j.ultrasmedbio.2019.11.020] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2019] [Revised: 10/29/2019] [Accepted: 11/30/2019] [Indexed: 06/10/2023]
Abstract
Left ventricular (LV) blood flow is an inherently complex time-varying 3-D phenomenon, where 2-D quantification often ignores the effect of out-of-plane motion. In this study, we describe high frame rate 4-D echocardiographic particle image velocimetry (echo-PIV) using a prototype matrix transesophageal transducer and a dynamic LV phantom for testing the accuracy of echo-PIV in the presence of complex flow patterns. Optical time-resolved tomographic PIV (tomo-PIV) was used as a reference standard for comparison. Echo-PIV and tomo-PIV agreed on the general profile of the LV flow patterns, but echo-PIV smoothed out the smaller flow structures. Echo-PIV also underestimated the flow rates at greater imaging depths, where the PIV kernel size and transducer point spread function were large relative to the velocity gradients. We demonstrate that 4-D echo-PIV could be performed in just four heart cycles, which would require only a short breath-hold, providing promising results. However, methods for resolving high velocity gradients in regions of poor spatial resolution are required before clinical translation.
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Affiliation(s)
- Jason Voorneveld
- Department of Biomedical Engineering, Thorax Center, Erasmus MC University Medical Center, Rotterdam, the Netherlands.
| | - Hicham Saaid
- Institute Biomedical Technology, Ghent University, Ghent, Belgium
| | - Christiaan Schinkel
- Transport Phenomena Section, Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology; the Netherlands
| | | | | | - Frank J H Gijsen
- Department of Biomedical Engineering, Thorax Center, Erasmus MC University Medical Center, Rotterdam, the Netherlands
| | - Antonius F W van der Steen
- Department of Biomedical Engineering, Thorax Center, Erasmus MC University Medical Center, Rotterdam, the Netherlands; Laboratory of Acoustical Wavefield Imaging, Faculty of Applied Sciences, Delft University of Technology, Delft, the Netherlands
| | - Nico de Jong
- Department of Biomedical Engineering, Thorax Center, Erasmus MC University Medical Center, Rotterdam, the Netherlands; Laboratory of Acoustical Wavefield Imaging, Faculty of Applied Sciences, Delft University of Technology, Delft, the Netherlands
| | - Tom Claessens
- Department of Materials, Textiles and Chemical Engineering, Ghent University, Ghent, Belgium
| | - Hendrik J Vos
- Department of Biomedical Engineering, Thorax Center, Erasmus MC University Medical Center, Rotterdam, the Netherlands; Laboratory of Acoustical Wavefield Imaging, Faculty of Applied Sciences, Delft University of Technology, Delft, the Netherlands
| | - Sasa Kenjeres
- Transport Phenomena Section, Department of Chemical Engineering, Faculty of Applied Sciences, Delft University of Technology; the Netherlands
| | - Johan G Bosch
- Department of Biomedical Engineering, Thorax Center, Erasmus MC University Medical Center, Rotterdam, the Netherlands
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18
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Badescu E, Garcia D, Joos P, Bernard A, Augeul L, Ferrera R, Viallon M, Petrusca L, Friboulet D, Liebgott H. Comparison Between Multiline Transmission and Diverging Wave Imaging: Assessment of Image Quality and Motion Estimation Accuracy. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2019; 66:1560-1572. [PMID: 31251183 DOI: 10.1109/tuffc.2019.2925581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
High frame rate imaging is particularly important in echocardiography for better assessment of the cardiac function. Several studies showed that diverging wave imaging (DWI) and multiline transmission (MLT) are promising methods for achieving a high temporal resolution. The aim of this study was to compare MLT and compounded motion compensation (MoCo) DWI for the same transmitted power, same frame rates [image quality and speckle tracking echocardiography (STE) assessment], and same packet size [tissue Doppler imaging (TDI) assessment]. Our results on static images showed that MLT outperforms DW in terms of resolution (by 30% on average). However, in terms of contrast, MLT outperforms DW only for the depth of 11 cm (by 40% on average), the result being reversed at a depth of 4 cm (by 27% on average). In vitro results on a spinning phantom at nine different velocities showed that similar STE axial errors (up to 2.3% difference in median errors and up to 2.1% difference in the interquartile ranges) are obtained with both ultrafast methods. On the other hand, the median lateral STE estimates were up to 13% more accurate with DW than with MLT. On the contrary, the accuracy of TDI was only up to ~3% better with MLT, but the achievable DW Doppler frame rate was up to 20 times higher. However, our overall results showed that the choice of one method relative to the other is therefore dependent on the application. More precisely, in terms of image quality, DW is more suitable for imaging structures at low depths, while MLT can provide an improved image quality at the focal point that can be placed at higher depths. In terms of motion estimation, DW is more suitable for color Doppler-related applications, while MLT could be used to estimate velocities along selected lines of the image.
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Ersepke T, Kranemann TC, Schmitz G. On the Performance of Time Domain Displacement Estimators for Magnetomotive Ultrasound Imaging. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2019; 66:911-921. [PMID: 30869613 DOI: 10.1109/tuffc.2019.2903885] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
In magnetomotive (MM) ultrasound (US) imaging, magnetic nanoparticles (NPs) are excited by an external magnetic field and the tracked motion of the surrounding tissue serves as a surrogate parameter for the NP concentration. MMUS procedures exhibit weak displacement contrasts due to small forces on the NPs. Consequently, precise US-based displacement estimation is crucial in terms of a sufficiently high contrast-to-noise ratio (CNR) in MMUS imaging. Conventional MMUS detection of the NPs is based on samplewise evaluation of the phase of the in-phase and quadrature (IQ) data, where a low signal-to-noise ratio (SNR) in the data leads to strong phase noise and, thus, to an increased variance of the displacement estimate. This paper examines the performance of two time-domain displacement estimators (DEs) for MMUS imaging, which differ from conventional MMUS techniques by incorporating data from an axial segment. The normalized cross correlation (NCC) estimator and a recursive Bayesian estimator, incorporating spatial information from neighboring segments, weighted by the local SNR, are adapted for the small MMUS displacement magnitudes. Numerical simulations of MM-induced, time-harmonic bulk and Gaussian-shaped displacement profiles show that the two time-domain estimators yield a reduced estimation error compared to the phase-shift-based estimator. Phantom experiments, using our recently proposed magnetic excitation setup, show a 1.9-fold and 3.4-fold increase of the CNR in the MMUS images for the NCC and Bayes estimator compared to the conventional method, while the amount of required data is reduced by a factor of 100.
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Wigen MS, Fadnes S, Rodriguez-Molares A, Bjastad T, Eriksen M, Stensath KH, Stoylen A, Lovstakken L. 4-D Intracardiac Ultrasound Vector Flow Imaging-Feasibility and Comparison to Phase-Contrast MRI. IEEE TRANSACTIONS ON MEDICAL IMAGING 2018; 37:2619-2629. [PMID: 29994199 DOI: 10.1109/tmi.2018.2844552] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
In vivo characterization of intracardiac blood velocity vector fields may provide new clinical information but is currently not available for bedside evaluation. In this paper, 4-D vector flow imaging for intracardiac flow assessment is demonstrated using a clinical ultrasound (US) system and a matrix array transducer, without the use of contrast agent. Two acquisition schemes were developed, one for full volumetric coverage of the left ventricle (LA) at 50 vps and a 3-D thick-slice setup with continuous frame acquisition (4000 vps), both utilizing ECG-gating. The 3-D vector velocity estimates were obtained using a novel method combining phase and envelope information. In vitro validation in a rotating tissue-mimicking phantom revealed velocity estimates in compliance with the ground truth, with a linear regression slope of 0.80, 0.77, and 1.03 for the , , and velocity components, and with standard deviations of 2.53, 3.19, and 0.95 cm/s, respectively. In vivo measurements in a healthy LV showed good agreement with PC-MRI. Quantitative analysis of energy loss (EL) and kinetic energy (KE) further showed similar trends, with peak KE at 1.5 and 2.4 mJ during systole and 3.6 and 3.1 mJ for diastole for US and PC-MRI. Similar for EL, 0.15- 0.2 and 0.7 mW was found during systole and 0.6 and 0.7 mW during diastole, for US and PC-MRI, respectively. Overall, a potential for US as a future modality for 4D cardiac vector flow imaging was demonstrated, which will be further evaluated in clinical studies.
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