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Acharya G, Davis KA, Nozari E. Predictive modeling of evoked intracranial EEG response to medial temporal lobe stimulation in patients with epilepsy. Commun Biol 2024; 7:1210. [PMID: 39342058 PMCID: PMC11438964 DOI: 10.1038/s42003-024-06859-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Accepted: 09/06/2024] [Indexed: 10/01/2024] Open
Abstract
Despite promising advancements, closed-loop neurostimulation for drug-resistant epilepsy (DRE) still relies on manual tuning and produces variable outcomes, while automated predictable algorithms remain an aspiration. As a fundamental step towards addressing this gap, here we study predictive dynamical models of human intracranial EEG (iEEG) response under parametrically rich neurostimulation. Using data from n = 13 DRE patients, we find that stimulation-triggered switched-linear models with ~300 ms of causal historical dependence best explain evoked iEEG dynamics. These models are highly consistent across different stimulation amplitudes and frequencies, allowing for learning a generalizable model from abundant STIM OFF and limited STIM ON data. Further, evoked iEEG in nearly all subjects exhibited a distance-dependent pattern, whereby stimulation directly impacts the actuation site and nearby regions (≲ 20 mm), affects medium-distance regions (20 ~ 100 mm) through network interactions, and hardly reaches more distal areas (≳ 100 mm). Peak network interaction occurs at 60 ~ 80 mm from the stimulation site. Due to their predictive accuracy and mechanistic interpretability, these models hold significant potential for model-based seizure forecasting and closed-loop neurostimulation design.
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Affiliation(s)
- Gagan Acharya
- Department of Electrical and Computer Engineering, University of California, Riverside, CA, USA
| | - Kathryn A Davis
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Erfan Nozari
- Department of Electrical and Computer Engineering, University of California, Riverside, CA, USA.
- Department of Mechanical Engineering, University of California, Riverside, CA, USA.
- Department of Bioengineering, University of California, Riverside, CA, USA.
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Aud'hui M, Kachenoura A, Yochum M, Kaminska A, Nabbout R, Wendling F, Kuchenbuch M, Benquet P. Detection of seizure onset in childhood absence epilepsy. Clin Neurophysiol 2024; 163:267-279. [PMID: 38644110 DOI: 10.1016/j.clinph.2024.03.034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Revised: 03/19/2024] [Accepted: 03/26/2024] [Indexed: 04/23/2024]
Abstract
OBJECTIVE This study aims to detect the seizure onset, in childhood absence epilepsy, as early as possible. Indeed, interfering with absence seizures with sensory simulation has been shown to be possible on the condition that the stimulation occurs soon enough after the seizure onset. METHODS We present four variations (two supervised, two unsupervised) of an algorithm designed to detect the onset of absence seizures from 4 scalp electrodes, and compare their performance with that of a state-of-the-art algorithm. We exploit the characteristic shape of spike-wave discharges to detect the seizure onset. Their performance is assessed on clinical electroencephalograms from 63 patients with confirmed childhood absence epilepsy. RESULTS The proposed approaches succeed in early detection of the seizure onset, contrary to the classical detection algorithm. Indeed, the results clearly show the superiority of the proposed methods for small delays of detection, under 750 ms from the onset. CONCLUSION The performance of the proposed unsupervised methods is equivalent to that of the supervised ones. The use of only four electrodes makes the pipeline suitable to be embedded in a wearable device. SIGNIFICANCE The proposed pipelines perform early detection of absence seizures, which constitutes a prerequisite for a closed-loop system.
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Affiliation(s)
- M Aud'hui
- Univ Rennes, INSERM, LTSI - UMR 1099, Rennes F-35000, France
| | - A Kachenoura
- Univ Rennes, INSERM, LTSI - UMR 1099, Rennes F-35000, France
| | - M Yochum
- Univ Rennes, INSERM, LTSI - UMR 1099, Rennes F-35000, France.
| | - A Kaminska
- Department of Clinical Neurophysiology, Hôpital Necker Enfants Malades, AP-HP, Université de Paris, Paris, France
| | - R Nabbout
- Department of Clinical Neurophysiology, Hôpital Necker Enfants Malades, AP-HP, Université de Paris, Paris, France; Reference Center for Rare Epilepsies, Department of Pediatric Neurology, Member of EPICARE Network, Institute Imagine INSERM 1163, Université de Paris, Paris, France
| | - F Wendling
- Univ Rennes, INSERM, LTSI - UMR 1099, Rennes F-35000, France
| | - M Kuchenbuch
- Pediatric and Genetic Department, CHU, Nancy, France
| | - P Benquet
- Univ Rennes, INSERM, LTSI - UMR 1099, Rennes F-35000, France
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Yang C, Luo Q, Shu H, Le Bouquin Jeannès R, Li J, Xiang W. Exploration of interictal to ictal transition in epileptic seizures using a neural mass model. Cogn Neurodyn 2024; 18:1215-1225. [PMID: 38826671 PMCID: PMC11143138 DOI: 10.1007/s11571-023-09976-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2022] [Revised: 02/16/2023] [Accepted: 04/19/2023] [Indexed: 06/04/2024] Open
Abstract
An epileptic seizure can usually be divided into three stages: interictal, preictal, and ictal. However, the seizure underlying the transition from interictal to ictal activities in the brain involves complex interactions between inhibition and excitation in groups of neurons. To explore this mechanism at the level of a single population, this paper employed a neural mass model, named the complete physiology-based model (cPBM), to reconstruct electroencephalographic (EEG) signals and to infer the changes in excitatory/inhibitory connections related to excitation-inhibition (E-I) balance based on an open dataset recorded for ten epileptic patients. Since epileptic signals display spectral characteristics, spectral dynamic causal modelling (DCM) was applied to quantify these frequency characteristics by maximizing the free energy in the framework of power spectral density (PSD) and estimating the cPBM parameters. In addition, to address the local maximum problem that DCM may suffer from, a hybrid deterministic DCM (H-DCM) approach was proposed, with a deterministic annealing-based scheme applied in two directions. The H-DCM approach adjusts the temperature introduced in the objective function by gradually decreasing the temperature to obtain relatively good initialization and then gradually increasing the temperature to search for a better estimation after each maximization. The results showed that (i) reconstructed EEG signals belonging to the three stages together with their PSDs can be reproduced from the estimated parameters of the cPBM; (ii) compared to DCM, traditional D-DCM and anti D-DCM, the proposed H-DCM shows higher free energies and lower root mean square error (RMSE), and it provides the best performance for all stages (e.g., the RMSEs between the reconstructed PSD computed from the reconstructed EEG signal and the sample PSD obtained from the real EEG signal are 0.33 ± 0.08, 0.67 ± 0.37 and 0.78 ± 0.57 in the interictal, preictal and ictal stages, respectively); and (iii) the transition from interictal to ictal activity can be explained by an increase in the connections between pyramidal cells and excitatory interneurons and between pyramidal cells and fast inhibitory interneurons, as well as a decrease in the self-loop connection of the fast inhibitory interneurons in the cPBM. Moreover, the E-I balance, defined as the ratio between the excitatory connection from pyramidal cells to fast inhibitory interneurons and the inhibitory connection with the self-loop of fast inhibitory interneurons, is also significantly increased during the epileptic seizure transition. Supplementary Information The online version contains supplementary material available at 10.1007/s11571-023-09976-6.
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Affiliation(s)
- Chunfeng Yang
- Key Laboratory of Computer Network and Information Integration of Ministry of Education, Southeast University, Nanjing, 210096 China
- Jiangsu Provincal Joint International Research Laboratory of Medical Information Processing, Southeast University, Nanjing, 210096 China
- Centre de Recherche en Information Biomédicale Sino-français, Southeast University & Université de Rennes 1, Nanjing, 210096 China
| | - Qingbo Luo
- Key Laboratory of Computer Network and Information Integration of Ministry of Education, Southeast University, Nanjing, 210096 China
- Jiangsu Provincal Joint International Research Laboratory of Medical Information Processing, Southeast University, Nanjing, 210096 China
- Centre de Recherche en Information Biomédicale Sino-français, Southeast University & Université de Rennes 1, Nanjing, 210096 China
| | - Huazhong Shu
- Key Laboratory of Computer Network and Information Integration of Ministry of Education, Southeast University, Nanjing, 210096 China
- Jiangsu Provincal Joint International Research Laboratory of Medical Information Processing, Southeast University, Nanjing, 210096 China
- Centre de Recherche en Information Biomédicale Sino-français, Southeast University & Université de Rennes 1, Nanjing, 210096 China
| | - Régine Le Bouquin Jeannès
- Centre de Recherche en Information Biomédicale Sino-français, Southeast University & Université de Rennes 1, Nanjing, 210096 China
- Univ Rennes, Inserm, LTSI, UMR 1099, Rennes, 35000 France
| | - Jianqing Li
- Jiangsu Province Engineering Research Center for Smart Wearable and Rehabilitation Devices, School of Biomedical Engineering and Informatics, Nanjing Medical University, Nanjing, 211166 China
| | - Wentao Xiang
- Jiangsu Province Engineering Research Center for Smart Wearable and Rehabilitation Devices, School of Biomedical Engineering and Informatics, Nanjing Medical University, Nanjing, 211166 China
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Tan X, Zhu R, Xie Y, Chai Y. Suppression of absence seizures by using different stimulations in a reduced corticothalamic-basal ganglion-pedunculopontine nucleus model. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:20468-20485. [PMID: 38124561 DOI: 10.3934/mbe.2023905] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2023]
Abstract
Coupled neural network models are playing an increasingly important part in the modulation of absence seizures today. However, it is currently unclear how basal ganglia, corticothalamic network and pedunculopontine nucleus can coordinate with each other to develop a whole coupling circuit, theoretically. In addition, it is still difficult to select effective parameters of electrical stimulation on the regulation of absence seizures in clinical trials. Therefore, to develop a coupled model and reduce computation cost, a new model constructed by a simplified basal ganglion, two corticothalamic circuits and a pedunculopontine nucleus was proposed. Further, to seek better inhibition therapy, three electrical stimulations, high frequency stimulation (HFS), 1:0 coordinate reset stimulation (CRS) and 3:2 CRS, were applied to the thalamic reticular nucleus (RE) in the first corticothalamic circuit in the coupled model. The simulation results revealed that increasing the frequency and pulse width of an electrical stimulation within a certain range can also suppress seizures. Under the same parameters of electrical stimulation, the inhibitory effect of HFS on seizures was better than that of 1:0 CRS and 3:2 CRS. The research established a reduced corticothalamic-basal ganglion-pedunculopontine nucleus model, which lays a theoretical foundation for future optimal parameters selection of electrical stimulation. We hope that the findings will provide new insights into the role of theoretical models in absence seizures.
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Affiliation(s)
- Xiaolong Tan
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China
| | - Rui Zhu
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China
| | - Yan Xie
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China
| | - Yuan Chai
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China
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Pan Y, Zhang H, Xie Y, Chai Y. Role of coupling distances in a coupled thalamocortical network for regulation of epilepsy. J Theor Biol 2022; 550:111206. [PMID: 35850254 DOI: 10.1016/j.jtbi.2022.111206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2021] [Revised: 04/24/2022] [Accepted: 06/20/2022] [Indexed: 11/17/2022]
Abstract
The recent theoretical modeling of coupled cortical thalamic network is an important advance toward the spatiotemporal dynamics of the brain. However, the diversity of coupling distances is ignored, and the better choice of deep brain stimulation (DBS) parameters to control epilepsy is still a challenge so far. A modeling object of this paper is to establish a coupled cortical thalamic model with uncertain coupling distances including nine combinations. Based on the pathways formed by pyramidal neuronal population (PY), thalamic reticular nucleus (RE) and thalamic relay nucleus (TC), we simulate the spike-wave discharges (SWD) at 2-4Hz which are the main manifestations of absence episodes. It is demonstrated that combination (1/3, 1/9) between the left and right ventricles is the optimal coupling distance of the proposed model by analyzing the percentage of SWD. A stimulating object of this paper is to find an optimum parameter range of DBS. One of the important results is that the number of SWD is inversely proportional to the amplitude, another one is that the number of SWD shows a U-shaped trend with the change of frequency. The present study has laidtheoryfoundationforthebrainplasticity, which will provide an important theoretical basis and direction for the treatment of absence epilepsy in the future. In brief, hopefully our simulation results will provide some help to patients.
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Affiliation(s)
- Yufeng Pan
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China
| | - Hudong Zhang
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China
| | - Yan Xie
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China
| | - Yuan Chai
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai 201306, China.
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Zhang H, Chen Y, Xie Y, Chai Y. Closed-loop controller based on reference signal tracking for absence seizures. Sci Rep 2022; 12:6730. [PMID: 35468988 PMCID: PMC9038751 DOI: 10.1038/s41598-022-10803-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Accepted: 04/12/2022] [Indexed: 11/30/2022] Open
Abstract
Absent epilepsy is a kind of refractory epilepsy, which is characterized by 2–4 Hz spike and wave discharges (SWDs) in electroencephalogram. Open-loop deep brain stimulation (DBS) targeting the thalamic reticular nucleus (TRN) is an effective method to treat absent epilepsy by eliminating SWDs in the brain. Compared with open-loop DBS, closed-loop DBS has been recognized by researchers for its advantages of significantly inhibiting seizures and having fewer side effects. Since traditional trial-and-error methods for adjusting closed-loop controller parameters are too dependent on the experience of doctors, in this paper we designed two proportional integral (PI) controllers based on the basal ganglia-cortical-thalamic model, whose PI parameters are calculated from the stability of the system. The two PI controllers can automatically adjust the frequency and amplitude of DBS respectively according to the change of the firing rate detected by substantia nigra pars reticulata (SNr). The parameters of the PI controller are calculated based on the Routh-Hurwitz stability criterion of a linear system which transformed by the original system using controlled auto-regressive (CAR) model and recursive least squares (RLS) method. Numerical simulation results show that both PI controllers significantly destroy the SWDs of the cerebral cortex and restore it to the other two normal discharge modes according to the different target firing rate, which supplies a promising brain stimulation strategy.
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Affiliation(s)
- Hudong Zhang
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai, 201306, China
| | - Yuting Chen
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai, 201306, China
| | - Yan Xie
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai, 201306, China
| | - Yuan Chai
- School of Mathematics and Physics, Shanghai University of Electric Power, Shanghai, 201306, China.
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Regulatory Mechanism for Absence Seizures in Bidirectional Interactive Thalamocortical Model via Different Targeted Therapy Schemes. Neural Plast 2021; 2021:1198072. [PMID: 34567107 PMCID: PMC8463191 DOI: 10.1155/2021/1198072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Revised: 08/08/2021] [Accepted: 08/30/2021] [Indexed: 12/01/2022] Open
Abstract
Recent clinical practice has found that the spike-wave discharge (SWD) scopes of absence seizures change from small cortical region to large thalamocortical networks, which has also been proved by theoretical simulation. The best biophysics explanation is that there are interactions between coupled cortico-thalamic and thalamocortical circuits. To agree with experiment results and describe the phenomena better, we constructed a coupled thalamocortical model with bidirectional channel (CTMBC) to account for the causes of absence seizures which are connected by the principle of two-way communication of neural pathways. By adjusting the coupling strength of bidirectional pathways, the spike-wave discharges are reproduced. Regulatory mechanism for absence seizures is further applied to CTMBC via four different targeted therapy schemes, such as deep brain stimulation (DBS), charge-balanced biphasic pulse (CBBP), coordinated reset stimulation (CRS) 1 : 0, and (CRS) 3 : 2. The new CTMBC model shows that neurodiversity in bidirectional interactive channel could supply theory reference for the bidirectional communication mode of thalamocortical networks and the hypothesis validation of pathogenesis.
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Yan L, Zhang H, Sun Z, Shen Z. Control analysis of electrical stimulation for epilepsy waveforms in a thalamocortical network. J Theor Biol 2020; 504:110391. [PMID: 32640272 DOI: 10.1016/j.jtbi.2020.110391] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2020] [Revised: 06/20/2020] [Accepted: 06/24/2020] [Indexed: 11/28/2022]
Abstract
Physiological experiments and computational models both show that the thalamic reticular nucleus (RE) participates in inducing various firing patterns of cortex. Absence seizure, featured by 2-4 Hz spike-wave discharges (SWD) oscillation, is a high incidence of disease in children. Lots of electrophysiological experiments have verified the correlation between absence seizures and RE, however, the dynamical mechanisms are not well understood. Based on previous Taylor model, we firstly study the effects of external input and self-inhibition of RE on epilepsy transition. We show that increasing external input and self-inhibition of RE can lead the system from epileptic state to normal state, and vice versa. Next, we explore two stimulus strategies added in RE and various transition behaviors can be induced, such as high saturated state to clonic. Meanwhile, as the intensity of stimulation increasing, they can not only suppress the SWD, but also produce tonic-clonic oscillation. Finally, the control of DBS on single neuron cluster and two neuron clusters are compared and we find stimulating RE and TC simultaneously is a superior mode to stimulate anyone of RE or TC. It is hoped that the results we obtained will have an enlightenment on clinical treatment.
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Affiliation(s)
- Luyao Yan
- School of Mathematics and Statistics, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
| | - Honghui Zhang
- School of Mathematics and Statistics, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
| | - Zhongkui Sun
- School of Mathematics and Statistics, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China.
| | - Zhuan Shen
- School of Mathematics and Statistics, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, China
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