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Song J, Yin H, Huang J, Wu Z, Wei C, Qiu T, Luo Y. Deep learning for assessing liver fibrosis based on acoustic nonlinearity maps: an in vivo study of rabbits. Comput Assist Surg (Abingdon) 2022; 27:15-26. [PMID: 35559651 DOI: 10.1080/24699322.2022.2063760] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023] Open
Abstract
This study aimed to assess liver fibrosis in rabbits by deep learning models based on acoustic nonlinearity maps. Injection of carbon tetrachloride was used to induce liver fibrosis. Acoustic nonlinearity maps, which were built by data of echo signals, were used as input data for deep learning model. Convolutional neural network (CNN), CNN combined with support vector machine (SVM), CNN combined with random forest and CNN combined with logistic regression were used as deep learning model. Nested 10-fold cross-validation was used to search hyperparameters and evaluate performance of models. Histologic examination of liver specimens of the rabbits was performed to evaluate the fibrosis stage. Receiver operator characteristic curve and area under curve (AUC) were used for estimating the probability of the correct prediction of liver fibrosis stages. A total of 600 acoustic nonlinearity maps were used. Model of CNN combined with SVM demonstrated the best diagnostic performance compared with all other methods for diagnosis of significant fibrosis (≥F2, AUC = 0.82), advanced fibrosis (≥F3, AUC = 0.88) and cirrhosis (F4, AUC = 0.90). Model of CNN showed the second highest AUCs. The deep learning model based on acoustic nonlinearity maps demonstrated potential for evaluation of liver fibrosis.
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Affiliation(s)
- Jinzhen Song
- Department of Abdominal Ultrasound, The Affiliated Hospital of Qingdao University, Qingdao, China.,Department of Ultrasound, West China Hospital of Sichuan University, Chengdu, China
| | - Hao Yin
- School of Computer Science, Sichuan University, Chengdu, China
| | - Jianbo Huang
- Department of Ultrasound, West China Hospital of Sichuan University, Chengdu, China
| | - Zhenru Wu
- Research Institute of Pathology, West China Hospital Sichuan University, Chengdu, China
| | - Chenchen Wei
- Neurology Department, The Affiliated Hospital of Qingdao University, Qingdao, China
| | - Tingting Qiu
- Department of Ultrasound, West China Hospital of Sichuan University, Chengdu, China
| | - Yan Luo
- Department of Ultrasound, West China Hospital of Sichuan University, Chengdu, China
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Papachristidis A, Queirós S, Theodoropoulos KC, D'hooge J, Rafter P, Masoero G, Zidros S, Pagnano G, Huang M, Dancy L, Sado D, Shah AM, Murgatroyd FD, Monaghan MJ. The Impact of Vendor-Specific Ultrasound Beam-Forming and Processing Techniques on the Visualization of In Vitro Experimental "Scar": Implications for Myocardial Scar Imaging Using Two-Dimensional and Three-Dimensional Echocardiography. J Am Soc Echocardiogr 2021; 34:1095-1105.e6. [PMID: 34082020 DOI: 10.1016/j.echo.2021.05.016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Revised: 05/16/2021] [Accepted: 05/17/2021] [Indexed: 11/24/2022]
Abstract
BACKGROUND Myocardial scar appears brighter compared with normal myocardium on echocardiography because of differences in tissue characteristics. The aim of this study was to test how different ultrasound pulse characteristics affect the brightness contrast (i.e., contrast ratio [CR]) between tissues of different acoustic properties, as well as the accuracy of assessing tissue volume. METHODS An experimental in vitro "scar" model was created using overheated and raw pieces of commercially available bovine muscle. Two-dimensional and three-dimensional ultrasound scanning of the model was performed using combinations of ultrasound pulse characteristics: ultrasound frequency, harmonics, pulse amplitude, steady pulse (SP) emission, power modulation (PM), and pulse inversion modalities. RESULTS On both two-dimensional and three-dimensional imaging, the CR between the "scar" and its adjacent tissue was higher when PM was used. PM, as well as SP ultrasound imaging, provided good "scar" volume quantification. When tested on 10 "scars" of different size and shape, PM resulted in lower bias (-9.7 vs 54.2 mm3) and narrower limits of agreement (-168.6 to 149.2 mm3 vs -296.0 to 404.4 mm3, P = .03). The interobserver variability for "scar" volume was better with PM (intraclass correlation coefficient = 0.901 vs 0.815). Two-dimensional and three-dimensional echocardiography with PM and SP was performed on 15 individuals with myocardial scar secondary to infarction. The CR was higher on PM imaging. Using cardiac magnetic resonance as a reference, quantification of myocardial scar volume showed better agreement when PM was used (bias, -645 mm3; limits of agreement, -3,158 to 1,868 mm3) as opposed to SP (bias, -1,138 mm3; limits of agreement, -5,510 to 3,233 mm3). CONCLUSIONS The PM modality increased the CR between tissues with different acoustic properties in an experimental in vitro "scar" model while allowing accurate quantification of "scar" volume. By applying the in vitro findings to humans, PM resulted in higher CR between scarred and healthy myocardium, providing better scar volume quantification than SP compared with cardiac magnetic resonance.
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Affiliation(s)
- Alexandros Papachristidis
- Cardiology Department, King's College Hospital, London, United Kingdom; King's College London, British Heart Foundation Centre, London, United Kingdom.
| | - Sandro Queirós
- Life and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, Braga, Portugal; ICVS/3B's-PT Government Associate Laboratory, Braga/Guimarães, Portugal; Lab on Cardiovascular Imaging and Dynamics, Department of Cardiovascular Sciences, KU Leuven, Leuven, Belgium
| | | | - Jan D'hooge
- Lab on Cardiovascular Imaging and Dynamics, Department of Cardiovascular Sciences, KU Leuven, Leuven, Belgium
| | | | - Giovanni Masoero
- Cardiology Department, King's College Hospital, London, United Kingdom
| | - Spyridon Zidros
- Cardiology Department, King's College Hospital, London, United Kingdom
| | - Gianpiero Pagnano
- Cardiology Department, King's College Hospital, London, United Kingdom
| | - Marilou Huang
- Cardiology Department, King's College Hospital, London, United Kingdom
| | - Luke Dancy
- Cardiology Department, King's College Hospital, London, United Kingdom; King's College London, British Heart Foundation Centre, London, United Kingdom
| | - Daniel Sado
- Cardiology Department, King's College Hospital, London, United Kingdom; King's College London, British Heart Foundation Centre, London, United Kingdom
| | - Ajay M Shah
- Cardiology Department, King's College Hospital, London, United Kingdom; King's College London, British Heart Foundation Centre, London, United Kingdom
| | - Francis D Murgatroyd
- Cardiology Department, King's College Hospital, London, United Kingdom; King's College London, British Heart Foundation Centre, London, United Kingdom
| | - Mark J Monaghan
- Cardiology Department, King's College Hospital, London, United Kingdom; King's College London, British Heart Foundation Centre, London, United Kingdom
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Panfilova A, van Sloun RJG, Wijkstra H, Sapozhnikov OA, Mischi M. A review on B/A measurement methods with a clinical perspective. THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2021; 149:2200. [PMID: 33940890 DOI: 10.1121/10.0003627] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Accepted: 02/12/2021] [Indexed: 06/12/2023]
Abstract
The nonlinear parameter of ultrasound B/A has shown to be a useful diagnostic parameter, reflecting medium content, structure, and temperature. Despite its recognized values, B/A is not yet used as a diagnostic tool in the clinic due to the limitations of current measurement and imaging techniques. This review presents an extensive and comprehensive overview of the techniques developed for B/A measurement of liquid and liquid-like media (e.g., tissue), identifying the methods that are most promising from a clinical perspective. This work summarizes the progress made in the field and the typical challenges on the way to B/A estimation. Limitations and problems with the current techniques are identified, suggesting directions that may lead to further improvement. Since the basic theory of the physics behind the measurement strategies is presented, it is also suited for a reader who is new to nonlinear ultrasound.
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Affiliation(s)
- Anastasiia Panfilova
- Electrical Engineering Department, Faculty of Electrical Engineering, Eindhoven University of Technology, Groene Loper 35612 AE, Eindhoven, The Netherlands
| | - Ruud J G van Sloun
- Electrical Engineering Department, Faculty of Electrical Engineering, Eindhoven University of Technology, Groene Loper 35612 AE, Eindhoven, The Netherlands
| | - Hessel Wijkstra
- Electrical Engineering Department, Faculty of Electrical Engineering, Eindhoven University of Technology, Groene Loper 35612 AE, Eindhoven, The Netherlands
| | - Oleg A Sapozhnikov
- Department of Acoustics, Physics Faculty, Moscow State University, Leninskie Gory, Moscow 119991, Russia
| | - Massimo Mischi
- Electrical Engineering Department, Faculty of Electrical Engineering, Eindhoven University of Technology, Groene Loper 35612 AE, Eindhoven, The Netherlands
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Chen W, Wang P, Zhang Z, Deng X, Zhang C, Ju S. Nonlinear ultrasonic imaging in pulse-echo mode using Westervelt equation: a preliminary research. Comput Assist Surg (Abingdon) 2020; 24:54-61. [PMID: 31549534 DOI: 10.1080/24699322.2019.1649065] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
Acoustic nonlinear parameter β, was of great interest in tissue characterization in recent years. Nonlinear imaging methods have been reported to provide improved spatial and contrast resolution. We introduce a nonlinear imaging method derived from nonlinear wave equation based on Gaussian-form solution assumption, which can be applied in pulse-echo mode on diagnostic ultrasound. Through making the use of two pulse transmission, only nonlinear effects are reserved and other effects like scattering, diffraction and linear attenuation can be eliminated. For validation of this method a set of simulation results are generated with a nonlinear simulator. Simulated images also indicate that our method clearly describes the spatial distribution of B/A in the medium.
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Affiliation(s)
- Wuxuan Chen
- School of Computer Science, Sichuan University , Chengdu , China
| | - Peng Wang
- School of Computer Science, Sichuan University , Chengdu , China
| | - Zhihong Zhang
- College of Computer Engineering and Applied Mathematics, Changsha University , Changsha , China
| | - Xudong Deng
- College of Computer Engineering and Applied Mathematics, Changsha University , Changsha , China
| | - Congyao Zhang
- School of Computer Science, Sichuan University , Chengdu , China
| | - Shenggen Ju
- School of Computer Science, Sichuan University , Chengdu , China
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Haumesser L, Vander Meulen F. Acoustic Distortion Ratio Enhancement Using Multiple Pulse-Echo Method (MPEM) for Evaluation of B/A Nonlinear Parameter. IEEE TRANSACTIONS ON ULTRASONICS, FERROELECTRICS, AND FREQUENCY CONTROL 2020; 67:643-650. [PMID: 31634126 DOI: 10.1109/tuffc.2019.2947068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
In this article, we report on the analysis of the extended acoustic signature obtained from the pulse-echo method to evaluate the B/A nonlinear parameter in fluids. In the known form of the method, the first acoustic tone burst from the reflector is used for the parameter measurement. The multiple pulse-echo method (MPEM) makes use of several tone bursts coming from the reflector back wall. The distortion ratio can be increased when the source frequency is tuned to a reflector resonance. The repercussion of this increase in the measurement of the nonlinear parameter B/A is investigated. As a practical result, this work suggests that the fluid volume required for the measurement can be reduced.
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Han S, Zhang Y, Wu K, He B, Zhang K, Liang H. Adaptive Ultrasound Tissue Harmonic Imaging Based on an Improved Ensemble Empirical Mode Decomposition Algorithm. ULTRASONIC IMAGING 2020; 42:57-73. [PMID: 31994455 DOI: 10.1177/0161734619900147] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Complete and accurate separation of harmonic components from the ultrasonic radio frequency (RF) echo signals is essential to improve the quality of harmonic imaging. There are limitations in the existing two commonly used separation methods, that is, the subjectivity for the high-pass filtering (S_HPF) method and motion artifacts for the pulse inversion (S_PI) method. A novel separation method called S_CEEMDAN, based on the complete ensemble empirical mode decomposition with adaptive noise (CEEMDAN) algorithm, is proposed to adaptively separate the second harmonic components for ultrasound tissue harmonic imaging. First, the ensemble size of the CEEMDAN algorithm is calculated adaptively according to the standard deviation of the added white noise. A set of intrinsic mode functions (IMFs) is then obtained by the CEEMDAN algorithm from the ultrasonic RF echo signals. According to the IMF spectra, the IMFs that contain both fundamental and harmonic components are further decomposed. The separation process is performed until all the obtained IMFs have been divided into either fundamental or harmonic categories. Finally, the fundamental and harmonic RF echo signals are obtained from the accumulations of signals from these two categories, respectively. In simulation experiments based on CREANUIS, the S_CEEMDAN-based results are similar to the S_HPF-based results, but better than the S_PI-based results. For the dynamic carotid artery measurements, the contrasts, contrast-to-noise ratios (CNRs), and tissue-to-clutter ratios (TCRs) of the harmonic images based on the S_CEEMDAN are averagely increased by 31.43% and 50.82%, 18.96% and 10.83%, as well as 34.23% and 44.18%, respectively, compared with those based on the S_HPF and S_PI methods. In conclusion, the S_CEEMDAN method provides improved harmonic images owing to its good adaptivity and lower motion artifacts, and is thus a potential alternative to the current methods for ultrasonic harmonic imaging.
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Affiliation(s)
- Suya Han
- University Key Lab of Electronic Information Processing of High-Altitude Medicine, Yunnan University, Kunming, China
| | - Yufeng Zhang
- University Key Lab of Electronic Information Processing of High-Altitude Medicine, Yunnan University, Kunming, China
| | - Keyan Wu
- University Key Lab of Electronic Information Processing of High-Altitude Medicine, Yunnan University, Kunming, China
| | - Bingbing He
- University Key Lab of Electronic Information Processing of High-Altitude Medicine, Yunnan University, Kunming, China
| | - Kexin Zhang
- The Second Affiliated Hospital of Kunming Medical University, Kunming, China
| | - Hong Liang
- University Key Lab of Electronic Information Processing of High-Altitude Medicine, Yunnan University, Kunming, China
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Maraghechi B, Kolios MC, Tavakkoli J. Feasibility of detecting change in backscattered energy of acoustic harmonics in locally heated tissues. Int J Hyperthermia 2019; 36:964-974. [DOI: 10.1080/02656736.2019.1660001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Affiliation(s)
- Borna Maraghechi
- Department of Physics, Ryerson University, Toronto, Ontario, Canada
- Department of Radiation Oncology, Washington University School of Medicine, St. Louis, MO, USA
| | - Michael C. Kolios
- Department of Physics, Ryerson University, Toronto, Ontario, Canada
- Institute for Biomedical Engineering, Science and Technology (iBEST), Keenan Research Centre for Biomedical Science, St. Michael’s Hospital, Toronto, Ontario, Canada
| | - Jahan Tavakkoli
- Department of Physics, Ryerson University, Toronto, Ontario, Canada
- Institute for Biomedical Engineering, Science and Technology (iBEST), Keenan Research Centre for Biomedical Science, St. Michael’s Hospital, Toronto, Ontario, Canada
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Xia L. Analysis of acoustic nonlinearity parameter B/A in liquids containing ultrasound contrast agents. THE JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA 2019; 146:1394. [PMID: 31472549 DOI: 10.1121/1.5123486] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2019] [Accepted: 08/06/2019] [Indexed: 06/10/2023]
Abstract
The acoustic nonlinearity parameter B/A plays a significant role in the characterization of acoustic properties of various biomaterials and biological tissues. It has the potential to be a favorable imaging modality in contrast ultrasound imaging with coated microbubbles. However, the development of effective means for evaluating the nonlinearity parameter of suspensions of ultrasound contrast agents (UCAs, also known as bubbly liquids) remains open. The present paper formulates a new equation based on the thermodynamic method that correlates both attenuation and phase velocity of linear ultrasound. The simplicity of the present method makes the B/A estimation possible with a relatively rigorous mathematical derivation. The calculated nonlinearity parameter contains the contribution of dynamic effects of bubbles, and its low-frequency limit agrees with B/A estimated by the method of mixture law when the volume fraction is below 10-4. Furthermore, the maximum B/A in bubbly liquids can reach up to105, while the minimum can be as low as -105. The negative nonlinearity parameter indicates significantly different thermodynamic properties of bubbly liquids.
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Affiliation(s)
- Lang Xia
- X-wave Innovations Incorporated, Gaithersburg, Maryland 20878, USA
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Lee J, Chang JH. Dual-Element Intravascular Ultrasound Transducer for Tissue Harmonic Imaging and Frequency Compounding: Development and Imaging Performance Assessment. IEEE Trans Biomed Eng 2019; 66:3146-3155. [PMID: 30835204 DOI: 10.1109/tbme.2019.2901005] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
OBJECTIVE For accurate diagnosis of atherosclerosis, the high spatial and contrast resolutions of intravascular ultrasound (IVUS) images are a key requirement. Increasing the center frequency of IVUS is a simple solution to meet this requirement. However, this leads to a reduction in imaging depth due to the frequency-dependent attenuation of ultrasound. Here, we report a recently developed dual-element IVUS transducer for tissue harmonic imaging (THI) and frequency compounding to increase the spatial and contrast resolutions of IVUS images, while maintaining the imaging depth to assess the overall morphological change of blood vessels. METHODS One 35-MHz element is used for producing general IVUS images and the other 70-MHz element is for receiving the second harmonic signals induced by the 35-MHz ultrasound. The fundamental and second harmonic signals can also be used for frequency compound imaging to further improve contrast resolution. The spatial and contrast resolutions achieved by the developed transducer were evaluated through wire and tissue-mimicking phantom imaging tests. Additionally, the images of a stent deployed in a tissue-mimicking phantom and an excised pig artery were acquired to assess clinical usefulness of the transducer. RESULTS The results demonstrated that the developed IVUS transducer enables us to simultaneously examine the overall morphological change of blood vessels by the 35-MHz ultrasound images and the near vessel layers such as the intima, the media, and the adventitia by either THI or compound images with high spatial and contrast resolutions. In addition, the developed transducer facilitates the simultaneous acquisition of 35- and 70-MHz fundamental images when needed. CONCLUSION The developed dual-element IVUS transducer makes it possible to fully realize the potential benefits of IVUS in the diagnosis of atherosclerosis.
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