1
|
Guengerich FP. Roles of Individual Human Cytochrome P450 Enzymes in Drug Metabolism. Pharmacol Rev 2024; 76:1104-1132. [PMID: 39054072 PMCID: PMC11549934 DOI: 10.1124/pharmrev.124.001173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Revised: 05/28/2024] [Accepted: 07/22/2024] [Indexed: 07/27/2024] Open
Abstract
Our knowledge of the roles of individual cytochrome P450 (P450) enzymes in drug metabolism has developed considerably in the past 30 years, and this base has been of considerable use in avoiding serious issues with drug interactions and issues due to variations. Some newer approaches are being considered for "phenotyping" metabolism reactions with new drug candidates. Endogenous biomarkers are being used for noninvasive estimation of levels of individual P450 enzymes. There is also the matter of some remaining "orphan" P450s, which have yet to be assigned reactions. Practical problems that continue in drug development include predicting drug-drug interactions, predicting the effects of polymorphic and other P450 variations, and evaluating interspecies differences in drug metabolism, particularly in the context of "metabolism in safety testing" regulatory issues ["disproportionate (human) metabolites"]. SIGNIFICANCE STATEMENT: Cytochrome P450 enzymes are the major catalysts involved in drug metabolism. The characterization of their individual roles has major implications in drug development and clinical practice.
Collapse
Affiliation(s)
- F Peter Guengerich
- Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee
| |
Collapse
|
2
|
Dumenigo A, Rusk A, Marathe K. CYP4F22-Related Autosomal Recessive Congenital Ichthyosis: Clinical Presentation. Cureus 2022; 14:e22272. [PMID: 35350521 PMCID: PMC8932220 DOI: 10.7759/cureus.22272] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/13/2022] [Indexed: 11/24/2022] Open
Abstract
Autosomal recessive congenital ichthyosis (ARCI) is a group of hereditary, nonsyndromic disorders of keratinization. ARCI encompasses several different clinical presentations and is caused by various genetic mutations. Commonly, ARCI presents with a taut, thick, shiny stratum corneum called a collodion membrane, but patients with mutations in CYP4F22 frequently present only with erythroderma. We report the case of a patient who was heterozygous for a pathogenic variant and a variant of uncertain significance in the CYP4F22 gene and presented with a collodion membrane and developed a mild ichthyosis phenotype.
Collapse
|
3
|
Esperón-Moldes U, Ginarte-Val M, Rodríguez-Pazos L, Fachal L, Martín-Santiago A, Vicente A, Jiménez-Gallo D, Guillén-Navarro E, Sampol LM, González-Enseñat MA, Vega A. Novel CYP4F22 mutations associated with autosomal recessive congenital ichthyosis (ARCI). Study of the CYP4F22 c.1303C>T founder mutation. PLoS One 2020; 15:e0229025. [PMID: 32069299 PMCID: PMC7028276 DOI: 10.1371/journal.pone.0229025] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2019] [Accepted: 01/28/2020] [Indexed: 11/18/2022] Open
Abstract
Mutations in CYP4F22 cause autosomal recessive congenital ichthyosis (ARCI). However, less than 10% of all ARCI patients carry a mutation in CYP4F22. In order to identify the molecular basis of ARCI among our patients (a cohort of ninety-two Spanish individuals) we performed a mutational analysis using direct Sanger sequencing in combination with a multigene targeted NGS panel. From these, eight ARCI families (three of them with Moroccan origin) were found to carry five different CYP4F22 mutations, of which two were novel. Computational analysis showed that the mutations found were present in highly conserved residues of the protein and may affect its structure and function. Seven of the eight families were carriers of a highly recurrent CYP4F22 variant, c.1303C>T; p.(His435Tyr). A 12Mb haplotype was reconstructed in all c.1303C>T carriers by genotyping ten microsatellite markers flanking the CYP4F22 gene. A prevalent 2.52Mb haplotype was observed among Spanish carrier patients suggesting a recent common ancestor. A smaller core haplotype of 1.2Mb was shared by Spanish and Moroccan families. Different approaches were applied to estimate the time to the most recent common ancestor (TMRCA) of carrier patients with Spanish origin. The age of the mutation was calculated by using DMLE and BDMC2. The algorithms estimated that the c.1303C>T variant arose approximately 2925 to 4925 years ago, while Spanish carrier families derived from a common ancestor who lived in the XIII century. The present study reports five CYP4F22 mutations, two of them novel, increasing the number of CYP4F22 mutations currently listed. Additionally, our results suggest that the recurrent c.1303C>T change has a founder effect in Spanish population and c.1303C>T carrier families originated from a single ancestor with probable African ancestry.
Collapse
Affiliation(s)
- Uxia Esperón-Moldes
- Fundación Pública Galega de Medicina Xenómica-SERGAS, Grupo de Medicina Xenómica-USC, CIBERER, IDIS, Santiago de Compostela, Spain
- Departamento de Ciencias Forenses, Anatomía Patolóxica, Xinecoloxía, Obstetricia e Pediatría, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - Manuel Ginarte-Val
- Dermatology Service of Complexo Hospitalario Universitario de Santiago, Santiago de Compostela, Spain
| | | | - Laura Fachal
- Fundación Pública Galega de Medicina Xenómica-SERGAS, Grupo de Medicina Xenómica-USC, CIBERER, IDIS, Santiago de Compostela, Spain
| | - Ana Martín-Santiago
- Dermatology Service of Hospital Universitari Son Espases, Palma de Mallorca, Spain
| | - Asunción Vicente
- Dermatology Service of Hospital Sant Joan de Déu, Barcelona, Spain
| | | | | | | | | | - Ana Vega
- Fundación Pública Galega de Medicina Xenómica-SERGAS, Grupo de Medicina Xenómica-USC, CIBERER, IDIS, Santiago de Compostela, Spain
- * E-mail:
| |
Collapse
|
4
|
Seidl‐Philipp M, Schatz UA, Gasslitter I, Moosbrugger‐Martinz V, Blunder S, Schossig AS, Zschocke J, Schmuth M, Gruber R. Spektrum der Ichthyosen in einer österreichischen Ichthyosekohorte von 2004–2007. J Dtsch Dermatol Ges 2020; 18:17-26. [DOI: 10.1111/ddg.13968_g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Accepted: 06/14/2019] [Indexed: 12/12/2022]
Affiliation(s)
- Magdalena Seidl‐Philipp
- Universitätsklinik für DermatologieVenerologie und AllergologieMedizinische Universität Innsbruck Innsbruck Österreich
| | - Ulrich A. Schatz
- Division für HumangenetikMedizinische Universität Innsbruck Innsbruck Österreich
| | - Irina Gasslitter
- Universitätsklinik für Innere Medizin IIMedizinische Universität Innsbruck Innsbruck Österreich
| | - Verena Moosbrugger‐Martinz
- Universitätsklinik für DermatologieVenerologie und AllergologieMedizinische Universität Innsbruck Innsbruck Österreich
| | - Stefan Blunder
- Universitätsklinik für DermatologieVenerologie und AllergologieMedizinische Universität Innsbruck Innsbruck Österreich
| | - Anna S. Schossig
- Division für HumangenetikMedizinische Universität Innsbruck Innsbruck Österreich
| | - Johannes Zschocke
- Division für HumangenetikMedizinische Universität Innsbruck Innsbruck Österreich
| | - Matthias Schmuth
- Universitätsklinik für DermatologieVenerologie und AllergologieMedizinische Universität Innsbruck Innsbruck Österreich
| | - Robert Gruber
- Universitätsklinik für DermatologieVenerologie und AllergologieMedizinische Universität Innsbruck Innsbruck Österreich
| |
Collapse
|
5
|
Seidl-Philipp M, Schatz UA, Gasslitter I, Moosbrugger-Martinz V, Blunder S, Schossig AS, Zschocke J, Schmuth M, Gruber R. Spectrum of ichthyoses in an Austrian ichthyosis cohort from 2004 to 2017. J Dtsch Dermatol Ges 2019; 18:17-25. [PMID: 31642606 DOI: 10.1111/ddg.13968] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Accepted: 06/14/2019] [Indexed: 12/12/2022]
Abstract
BACKGROUND Ichthyoses are a heterogeneous disease group, which makes clinical classification challenging. An ichthyosis cohort at a center for genodermatoses is presented in detail. PATIENTS AND METHODS Patients with clinically and/or genetically confirmed ichthyosis seen from 2004 to 2017 and listed in a database were included. Disease onset, phenotype, histology, comorbidities and family history were described in detail. In genetically tested patients, the prevalence of various ARCI genes, ARCI phenotypes and syndromic ichthyoses, as well as genotype-phenotype correlation and year/method of genetic testing was assessed. RESULTS Of all 198 patients who were included in the cohort, 151 were genetically tested. 81 had ichthyosis vulgaris, 43 X-linked ichthyosis, 38 autosomal recessive congenital ichthyosis (ARCI), 9 keratinopathic ichthyosis (KPI) and one exfoliative ichthyosis. 26 individuals suffered from syndromic ichthyoses. A good genotype-phenotype correlation was observed for common ichthyoses and KPI; the correlation was less good in syndromic ichthyoses. In 91 % of ARCI patients an accurate diagnosis was obtained by genetic testing. In only 33 % of syndromic ichthyoses was the definitive diagnosis suspected before genetic testing, which revealed a causative mutation in 86 % of cases. CONCLUSION This study describes the spectrum of ichthyoses in a center of expertise and shows that genetic testing should become a diagnostic standard for this disease group.
Collapse
Affiliation(s)
- Magdalena Seidl-Philipp
- Department of Dermatology, Venereology and Allergology, Medical University of Innsbruck, Innsbruck, Austria
| | - Ulrich A Schatz
- Department of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria
| | - Irina Gasslitter
- Department of Internal Medicine II, Medical University of Innsbruck, Innsbruck, Austria
| | - Verena Moosbrugger-Martinz
- Department of Dermatology, Venereology and Allergology, Medical University of Innsbruck, Innsbruck, Austria
| | - Stefan Blunder
- Department of Dermatology, Venereology and Allergology, Medical University of Innsbruck, Innsbruck, Austria
| | - Anna S Schossig
- Department of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria
| | - Johannes Zschocke
- Department of Human Genetics, Medical University of Innsbruck, Innsbruck, Austria
| | - Matthias Schmuth
- Department of Dermatology, Venereology and Allergology, Medical University of Innsbruck, Innsbruck, Austria
| | - Robert Gruber
- Department of Dermatology, Venereology and Allergology, Medical University of Innsbruck, Innsbruck, Austria
| |
Collapse
|
6
|
Sayeb M, Riahi Z, Laroussi N, Bonnet C, Romdhane L, Mkaouar R, Zaouak A, Marrakchi J, Abdessalem G, Messaoud O, Bouchniba O, Ghilane N, Mokni M, Besbes G, Yacoub‐Youssef H, Petit C, Abdelhak S. A Tunisian family with a novel mutation in the gene
CYP
4F22
for lamellar ichthyosis and co‐occurrence of hearing loss in a child due to mutation in the
SLC
26A4
gene. Int J Dermatol 2019; 58:1439-1443. [DOI: 10.1111/ijd.14452] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Revised: 03/06/2019] [Accepted: 03/11/2019] [Indexed: 12/30/2022]
Affiliation(s)
- Marwa Sayeb
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
| | - Zied Riahi
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
- INSERM UMRS 1120 Vision Institut Paris France
- University of Paris VI UPMC Sorbonnes Paris France
| | - Nadia Laroussi
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
| | - Crystel Bonnet
- INSERM UMRS 1120 Vision Institut Paris France
- University of Paris VI UPMC Sorbonnes Paris France
| | - Lilia Romdhane
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
- Department of Biology Faculty of Science of Bizerte Université Tunis Carthage ZarzounaTunisia
| | - Rahma Mkaouar
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
| | - Anissa Zaouak
- Department of Dermatology Habib Thameur Hospital TunisTunisia
| | | | - Ghaith Abdessalem
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
| | - Olfa Messaoud
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
| | - Oussema Bouchniba
- Departement of Biochemistry Habib Bourguiba Hospital MedenineTunisia
| | - Nacer Ghilane
- Departement of Biochemistry Habib Bourguiba Hospital MedenineTunisia
| | - Mourad Mokni
- Department of Dermatology CHU La Rabta Tunis Tunis Tunisia
| | - Ghazi Besbes
- Department of Otorhinolaryngology CHU La Rabta TunisTunisia
| | - Houda Yacoub‐Youssef
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
| | - Christine Petit
- INSERM UMRS 1120 Vision Institut Paris France
- University of Paris VI UPMC Sorbonnes Paris France
- Unité de Génétique et Physiologie de l'Audition Institut Pasteur Paris France
- Collège de France Paris France
| | - Sonia Abdelhak
- Laboratory of Biomedical Genomics and Oncogenetics (LR11IPT05) University of Tunis El Manar Pasteur Institut of Tunis Tunis Tunisia
| |
Collapse
|
7
|
Hotz A, Bourrat E, Küsel J, Oji V, Alter S, Hake L, Korbi M, Ott H, Hausser I, Zimmer AD, Fischer J. Mutation update for CYP4F22 variants associated with autosomal recessive congenital ichthyosis. Hum Mutat 2018; 39:1305-1313. [PMID: 30011118 DOI: 10.1002/humu.23594] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Revised: 07/03/2018] [Accepted: 07/11/2018] [Indexed: 11/06/2022]
Abstract
Autosomal recessive congenital ichthyosis (ARCI) is a heterogeneous group of rare disorders of keratinization characterized by generalized abnormal scaling of the skin. Ten genes are currently known to be associated with ARCI: TGM1, ALOXE3, ALOX12B, NIPAL4 (ICHTHYIN), ABCA12, CYP4F22, PNPLA1, CERS3, SDR9C7, and SULT2B1. Over a period of 22 years, we have studied a large patient cohort from 770 families with a clinical diagnosis of ARCI. Since the first report that mutations in the gene CYP4F22 are causative for ARCI in 2006, we have identified 54 families with pathogenic mutations in CYP4F22 including 23 previously unreported mutations. In this report, we provide an up-to-date overview of all published and novel CYP4F22 mutations and point out possible mutation hot spots. We discuss the molecular and clinical findings, the genotype-phenotype correlations and consequences on genetic testing.
Collapse
Affiliation(s)
- Alrun Hotz
- Faculty of Medicine, Institute of Human Genetics, University Medical Center Freiburg, University of Freiburg, Freiburg, Germany
| | - Emmanuelle Bourrat
- Centre de Référence des Génodermatoses, Hôpital Saint-Louis, Paris, France
| | - Julia Küsel
- Faculty of Medicine, Institute of Human Genetics, University Medical Center Freiburg, University of Freiburg, Freiburg, Germany
| | - Vinzenz Oji
- Department of Dermatology, University Hospital, Münster, Germany
| | - Svenja Alter
- Faculty of Medicine, Institute of Human Genetics, University Medical Center Freiburg, University of Freiburg, Freiburg, Germany
| | - Lisanne Hake
- Department of Dermatology, University Hospital, Münster, Germany
| | - Mouna Korbi
- Department of Dermatology, Hôpital Saint-Louis, Paris, France
| | - Hagen Ott
- Division of Pediatric Dermatology and Allergology, Children's Hospital Auf der Bult, Hanover, Germany
| | - Ingrid Hausser
- Institute of Pathology, Heidelberg University Hospital, Heidelberg, Germany
| | - Andreas D Zimmer
- Faculty of Medicine, Institute of Human Genetics, University Medical Center Freiburg, University of Freiburg, Freiburg, Germany
| | - Judith Fischer
- Faculty of Medicine, Institute of Human Genetics, University Medical Center Freiburg, University of Freiburg, Freiburg, Germany
| |
Collapse
|
8
|
Vahlquist A, Fischer J, Törmä H. Inherited Nonsyndromic Ichthyoses: An Update on Pathophysiology, Diagnosis and Treatment. Am J Clin Dermatol 2018; 19:51-66. [PMID: 28815464 PMCID: PMC5797567 DOI: 10.1007/s40257-017-0313-x] [Citation(s) in RCA: 107] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Hereditary ichthyoses are due to mutations on one or both alleles of more than 30 different genes, mainly expressed in the upper epidermis. Syndromic as well as nonsyndromic forms of ichthyosis exist. Irrespective of etiology, virtually all types of ichthyosis exhibit a defective epidermal barrier that constitutes the driving force for hyperkeratosis, skin scaling, and inflammation. In nonsyndromic forms, these features are most evident in severe autosomal recessive congenital ichthyosis (ARCI) and epidermolytic ichthyosis, but to some extent also occur in the common type of non-congenital ichthyosis. A correct diagnosis of ichthyosis-essential not only for genetic counseling but also for adequate patient information about prognosis and therapeutic options-is becoming increasingly feasible thanks to recent progress in genetic knowledge and DNA sequencing methods. This paper reviews the most important aspects of nonsyndromic ichthyoses, focusing on new knowledge about the pathophysiology of the disorders, which will hopefully lead to novel ideas about therapy.
Collapse
Affiliation(s)
- Anders Vahlquist
- Department of Medical Sciences, Dermatology, Uppsala University, Uppsala, Sweden
| | - Judith Fischer
- Institute of Human Genetics, University Medical Centre, Freiburg, Germany
| | - Hans Törmä
- Department of Medical Sciences, Dermatology, Uppsala University, Uppsala, Sweden.
| |
Collapse
|
9
|
Meibomian glands, meibum, and meibogenesis. Exp Eye Res 2017; 163:2-16. [PMID: 28669846 DOI: 10.1016/j.exer.2017.06.020] [Citation(s) in RCA: 87] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2017] [Revised: 06/14/2017] [Accepted: 06/28/2017] [Indexed: 12/28/2022]
Abstract
Meibum is a lipid-rich secretion that is produced by fully differentiated meibocytes in the holocrine Meibomian glands (MG) of humans and most mammals. The secretion is a part of a defense mechanism that protects the ocular surface from hazardous environmental factors, and from desiccation. Meibomian lipids that have been identified in meibum are very diverse and unique in nature. The lipid composition of meibum is different from virtually any other lipid pool found in the human body. In fact, meibum is quite different from sebum, which is the closest secretion that is produced by anatomically, physiologically, and biochemically related sebaceous glands. However, meibum of mice have been shown to closely resemble that of humans, implying similar biosynthetic mechanisms in MG of both species. By analyzing available genomic, immunohistochemical, and lipidomic data, we have envisioned a unifying network of enzymatic reactions that are responsible for biosynthesis of meibum, which we call meibogenesis. Our current theory is based on an assumption that most of the biosynthetic reactions of meibogenesis are catalyzed by known enzymes. However, the main features that make meibum unique - the ratio of identified classes of lipids, the extreme length of its components, extensive ω-hydroxylation of fatty acids and alcohols, iso- and anteiso-branching of meibomian lipids (e.g. waxes), and the presence of rather unique complex lipids with several ester bonds - make it possible that either the activity of known enzymes is altered in MG, or some unknown enzymes contribute to the processes of meibogenesis, or both. Studies are in progress to elucidate meibogenesis on molecular level.
Collapse
|
10
|
Hausser I. Ichthyoses: new insights unravel defects in skin barrier function resulting in diverse clinical and morphological phenotypes. Br J Dermatol 2017; 176:863-864. [PMID: 28418129 DOI: 10.1111/bjd.15211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- I Hausser
- Institute of Pathology, EM-Laboratory, University Clinic Heidelberg, and EM Core Facility, Heidelberg University, Germany
| |
Collapse
|