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Askar M, Tafavvoghi M, Småbrekke L, Bongo LA, Svendsen K. Using machine learning methods to predict all-cause somatic hospitalizations in adults: A systematic review. PLoS One 2024; 19:e0309175. [PMID: 39178283 PMCID: PMC11343463 DOI: 10.1371/journal.pone.0309175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Accepted: 08/06/2024] [Indexed: 08/25/2024] Open
Abstract
AIM In this review, we investigated how Machine Learning (ML) was utilized to predict all-cause somatic hospital admissions and readmissions in adults. METHODS We searched eight databases (PubMed, Embase, Web of Science, CINAHL, ProQuest, OpenGrey, WorldCat, and MedNar) from their inception date to October 2023, and included records that predicted all-cause somatic hospital admissions and readmissions of adults using ML methodology. We used the CHARMS checklist for data extraction, PROBAST for bias and applicability assessment, and TRIPOD for reporting quality. RESULTS We screened 7,543 studies of which 163 full-text records were read and 116 met the review inclusion criteria. Among these, 45 predicted admission, 70 predicted readmission, and one study predicted both. There was a substantial variety in the types of datasets, algorithms, features, data preprocessing steps, evaluation, and validation methods. The most used types of features were demographics, diagnoses, vital signs, and laboratory tests. Area Under the ROC curve (AUC) was the most used evaluation metric. Models trained using boosting tree-based algorithms often performed better compared to others. ML algorithms commonly outperformed traditional regression techniques. Sixteen studies used Natural language processing (NLP) of clinical notes for prediction, all studies yielded good results. The overall adherence to reporting quality was poor in the review studies. Only five percent of models were implemented in clinical practice. The most frequently inadequately addressed methodological aspects were: providing model interpretations on the individual patient level, full code availability, performing external validation, calibrating models, and handling class imbalance. CONCLUSION This review has identified considerable concerns regarding methodological issues and reporting quality in studies investigating ML to predict hospitalizations. To ensure the acceptability of these models in clinical settings, it is crucial to improve the quality of future studies.
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Affiliation(s)
- Mohsen Askar
- Faculty of Health Sciences, Department of Pharmacy, UiT-The Arctic University of Norway, Tromsø, Norway
| | - Masoud Tafavvoghi
- Faculty of Science and Technology, Department of Computer Science, UiT-The Arctic University of Norway, Tromsø, Norway
| | - Lars Småbrekke
- Faculty of Health Sciences, Department of Pharmacy, UiT-The Arctic University of Norway, Tromsø, Norway
| | - Lars Ailo Bongo
- Faculty of Science and Technology, Department of Computer Science, UiT-The Arctic University of Norway, Tromsø, Norway
| | - Kristian Svendsen
- Faculty of Health Sciences, Department of Pharmacy, UiT-The Arctic University of Norway, Tromsø, Norway
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Lu SC, Swisher CL, Chung C, Jaffray D, Sidey-Gibbons C. On the importance of interpretable machine learning predictions to inform clinical decision making in oncology. Front Oncol 2023; 13:1129380. [PMID: 36925929 PMCID: PMC10013157 DOI: 10.3389/fonc.2023.1129380] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Accepted: 02/14/2023] [Indexed: 03/04/2023] Open
Abstract
Machine learning-based tools are capable of guiding individualized clinical management and decision-making by providing predictions of a patient's future health state. Through their ability to model complex nonlinear relationships, ML algorithms can often outperform traditional statistical prediction approaches, but the use of nonlinear functions can mean that ML techniques may also be less interpretable than traditional statistical methodologies. While there are benefits of intrinsic interpretability, many model-agnostic approaches now exist and can provide insight into the way in which ML systems make decisions. In this paper, we describe how different algorithms can be interpreted and introduce some techniques for interpreting complex nonlinear algorithms.
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Affiliation(s)
- Sheng-Chieh Lu
- Section of Patient-Centered Analytics, Division of Internal Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX, United States
| | - Christine L Swisher
- The Ronin Project, San Mateo, CA, United States.,The Lawrence J. Ellison Institute for Transformative Medicine, Los Angeles, CA, United States
| | - Caroline Chung
- Department of Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.,Institute for Data Science in Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, United States
| | - David Jaffray
- Institute for Data Science in Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.,Department of Imaging Physics, The University of Texas MD Anderson Cancer Center, Houston, TX, United States.,Department of Radiation Physics, The University of Texas MD Anderson Cancer Center, Houston, TX, United States
| | - Chris Sidey-Gibbons
- Section of Patient-Centered Analytics, Division of Internal Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX, United States
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Wilkus EL, deVoil P, Marenya P, Snapp S, Dixon J, Rodriguez D. Sustainable Intensification Practices Reduce Food Deficit for the Best- and Worst-Off Households in Ethiopia and Mozambique. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2022. [DOI: 10.3389/fsufs.2021.649218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
An adequate food supply is widely recognized as a necessary condition for social development as well as a basic human right. Food deficits are especially common among semi-subsistence farming households in eastern and southern Africa and farm productivity is widely regarded as the locus for enhancing household food outcomes. However, knowledge gaps surrounding benefits associated with climate smart, productivity-enhancing technologies require attention. This study evaluates benefits associated with sustainable intensification farm management practices (crop residue retention, minimum tillage, manure application and use of herbicides, pesticides, fertilizer, and improved seeds) for household calorie and protein supplies and demonstrates their scope across households with high-, moderate- and low- likelihoods of calorie and protein deficits. Household-level calorie and protein deficits were estimated from survey data on food production, acquisition and consumption for households in Ethiopia and Mozambique. Multinomial logistic models were used to identify drivers of household food deficit status and logistic model trees established “rules of thumb” to classify households by food deficit status as low, moderate or high likelihood. In Ethiopia, especially wet seasons were associated with a high likelihood of a food deficit while especially dry seasons were associated with a high likelihood of food deficit in Mozambique. The practices associated with sustainable intensification and related technologies substantially enhanced food outcomes in groups with a high- and a low-likelihood of food deficit, and associated benefits were high for the best-off households. Benefits associated with sustainable intensification technologies were not observed for households with a moderate likelihood of a food deficit and some technologies even increased risk. The sustainable intensification practices assessed here were associated with improved food outcomes yet benefits were limited in scope for households of intermediate status. Thus, there is a need to expand the technical options available to reduce food deficit.
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Mohamed I. Prediction of Chronic Obstructive Pulmonary Disease Stages Using Machine Learning Algorithms. INTERNATIONAL JOURNAL OF DECISION SUPPORT SYSTEM TECHNOLOGY 2022. [DOI: 10.4018/ijdsst.286693] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Identifying chronic obstructive pulmonary disease (COPD) severity stages is of great importance to control the related mortality rates and reduce the associated costs. This study aims to build prediction models for COPD stages and, to compare the relative performance of five machine learning algorithms to determine the optimal prediction algorithm. This research is based on data collected from a private hospital in Egypt for the two calendar years 2018 and 2019. Five machine learning algorithms were used for the comparison. The F1 score, specificity, sensitivity, accuracy, positive predictive value and negative predictive value were the performance measures used for algorithms comparison. Analysis included 211 patients’ records. Our results show that the best performing algorithm in most of the disease stages is the PNN with the optimal prediction accuracy and hence it can be considered as a powerful prediction tool used by decision makers in predicting severity stages of COPD.
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Yakutcan U, Demir E, Hurst JR, Taylor PC, Ridsdale HA. Operational Modeling with Health Economics to Support Decision Making for COPD Patients. Health Serv Res 2021; 56:1271-1280. [PMID: 33754333 DOI: 10.1111/1475-6773.13652] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Abstract
OBJECTIVE To assess the impact of interventions for improving the management of chronic obstructive pulmonary disease (COPD), specifically increased use of pulmonary rehabilitation (PR) on patient outcomes and cost-benefit analysis. DATA SOURCES We used the national Hospital Episode Statistics (HES) datasets in England, local data and experts from the hospital setting, National Prices and National Tariffs, reports and the literature around the effectiveness of PR programs. STUDY DESIGN The COPD pathway was modeled using discrete event simulation (DES) to capture the patient pathway to an adequate level of detail as well as randomness in the real world. DES was further enhanced by the integration of a health economic model to calculate the net benefit and cost of treating COPD patients based on key sets of interventions. DATA COLLECTION/EXTRACTION METHODS A total of 150 input parameters and 75 distributions were established to power the model using the HES dataset, outpatient activity data from the hospital and community services, and the literature. PRINCIPAL FINDINGS The simulation model showed that increasing referral to PR (by 10%, 20%, or 30%) would be cost-effective (with a benefit-cost ratio of 5.81, 5.95, and 5.91, respectively) by having a positive impact on patient outcomes and operational metrics. Number of deaths, admissions, and bed days decreased (ie, by 3.56 patients, 4.90 admissions, and 137.31 bed days for a 30% increase in PR referrals) as well as quality of life increased (ie, by 5.53 QALY among 1540 patients for the 30% increase). CONCLUSIONS No operational model, either statistical or simulation, has previously been developed to capture the COPD patient pathway within a hospital setting. To date, no model has investigated the impact of PR on COPD services, such as operations, key performance, patient outcomes, and cost-benefit analysis. The study will support policies around extending availability of PR as a major intervention.
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Affiliation(s)
- Usame Yakutcan
- Hertfordshire Business School, University of Hertfordshire, Hatfield, UK
| | - Eren Demir
- Hertfordshire Business School, University of Hertfordshire, Hatfield, UK
| | - John R Hurst
- UCL Respiratory, University College London, London, UK
| | - Paul C Taylor
- Hertfordshire Business School, University of Hertfordshire, Hatfield, UK
| | - Heidi A Ridsdale
- Camden COPD and Home Oxygen Service, Central and North West London NHS Foundation Trust, London, UK
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Yu K, Xie X. Predicting Hospital Readmission: A Joint Ensemble-Learning Model. IEEE J Biomed Health Inform 2020; 24:447-456. [DOI: 10.1109/jbhi.2019.2938995] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Sun X, Chung S, Ma H. Operational Risk in Airline Crew Scheduling: Do Features of Flight Delays Matter?*. DECISION SCIENCES 2020. [DOI: 10.1111/deci.12426] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Xuting Sun
- SHU‐UTS SILC Business School Shanghai University Shanghai 201899 PR China
| | - Sai‐Ho Chung
- Department of Industrial and Systems Engineering The Hong Kong Polytechnic University Hung Hom Kowloon Hong Kong
| | - Hoi‐Lam Ma
- Department of Supply Chain and Information Management The Hang Seng University of Hong Kong Hang Shin Link, Siu Lek Yuen Shatin, N.T. Hong Kong
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Talaei-Khoei A, Tavana M, Wilson JM. A predictive analytics framework for identifying patients at risk of developing multiple medical complications caused by chronic diseases. Artif Intell Med 2019; 101:101750. [PMID: 31813486 DOI: 10.1016/j.artmed.2019.101750] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2018] [Revised: 07/07/2019] [Accepted: 10/30/2019] [Indexed: 01/22/2023]
Abstract
Chronic diseases often cause several medical complications. This paper aims to predict multiple complications among patients with a chronic disease. The literature uses single-task learning algorithms to predict complications independently and assumes no correlation among complications of chronic diseases. We propose two methods (independent prediction of complications with single-task learning and concurrent prediction of complications with multi-task learning) and show that medical complications of chronic diseases can be correlated. We use a case study and compare the performance of these two methods by predicting complications of hypertrophic cardiomyopathy on 106 predictors in 1078 electronic medical records from April 2009-April 2017, inclusive. The methods are implemented using logistic regression, artificial neural networks, decision trees, and support vector machines. The results show multi-task learning with logistic regression improves the performance of predictions in terms of both discrimination and calibration.
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Affiliation(s)
- Amir Talaei-Khoei
- Department of Information Systems, University of Nevada, Reno, USA; School of Software, University of Technology Sydney, Australia.
| | - Madjid Tavana
- Business Systems and Analytics Department, Distinguished Chair of Business Analytics, La Salle University, Philadelphia, USA; Business Information Systems Department, Faculty of Business Administration and Economics, University of Paderborn, Paderborn, Germany.
| | - James M Wilson
- School of Community Health Sciences, University of Nevada, Reno, USA.
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Bogaert M, Ballings M, Bergmans R, Van den Poel D. Predicting Self‐declared Movie Watching Behavior Using Facebook Data and Information‐Fusion Sensitivity Analysis. DECISION SCIENCES 2019. [DOI: 10.1111/deci.12406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Matthias Bogaert
- The University of Edinburgh Business School 29 Buccleuch Place Edinburgh EH8 9JS UK
- Ghent University Department of Marketing Tweekerkenstraat 2 9000 Ghent Belgium
| | - Michel Ballings
- The University of Tennessee Haslam College of Business Department of Business Analytics and Statistics 916 Volunteer Blvd., 249 Stokely Management Center 37996 Knoxville TN USA
| | - Rob Bergmans
- Ghent University Department of Marketing Tweekerkenstraat 2 9000 Ghent Belgium
| | - Dirk Van den Poel
- Ghent University Department of Marketing Tweekerkenstraat 2 9000 Ghent Belgium
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Li M, Wu Y, He Y, Huang S, Nair A. Sparse Inverse Covariance Estimation: A Data Mining Technique to Unravel Holistic Patterns among Business Practices in Firms. DECISION SCIENCES 2019. [DOI: 10.1111/deci.12404] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mei Li
- Department of Supply Chain ManagementEli Broad College of BusinessMichigan State University East Lansing MI 48824
| | - Ying Wu
- Department of Information Management and E‐businessSchool of ManagementXi'an Jiaotong University Xi'an Shanxi 710049 China
| | - Yi He
- Department of Industrial and Systems EngineeringUniversity of Washington Seattle Washington
| | - Shuai Huang
- Department of Industrial and Systems EngineeringUniversity of Washington Seattle Washington
| | - Anand Nair
- Department of Supply Chain ManagementEli Broad College of BusinessMichigan State University East Lansing MI 48824
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11
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Extraction of actionable knowledge to reduce hospital readmissions through patients personalization. Inf Sci (N Y) 2019. [DOI: 10.1016/j.ins.2019.02.006] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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12
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Luo L, Li J, Liu C, Shen W. Using machine-learning methods to support health-care professionals in making admission decisions. Int J Health Plann Manage 2019; 34:e1236-e1246. [PMID: 30957270 DOI: 10.1002/hpm.2769] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Revised: 02/08/2019] [Accepted: 02/08/2019] [Indexed: 02/05/2023] Open
Abstract
BACKGROUND Large tertiary hospitals usually face long waiting lines; patients who want to receive hospitalization need to be screened in advance. The patient admission screening process involves a health-care professional ranking patients by analyzing registration information. OBJECTIVE The purpose of this study was to develop a machine-learning approach to screening, using historical data and the experience of health-care professionals to develop a set of screening rules to help health-care professionals prioritize patient needs automatically. METHODS We used five machine-learning methods to sequence and predict elective patients: logistic regression (LR), random forest (RF), gradient-boosting decision tree (GBDT), extreme gradient boosting (XGBoost), and an ensemble model of the four models. RESULTS The results indicate that all of the five models showed a good prioritization performance with high predictive values. In particular, XGBoost had the best predictive performance compared with others in terms of the area under the receiver operating characteristic curve (AUC), with the AUC values of LR, RF, GBDT, XGBoost, and the ensemble model being 0.881, 0.816, 0.820, 0.901, and 0.897, respectively. CONCLUSION The results reported here indicate that machine-learning techniques can be valuable for automating the screening process. Our model can assist health-care professionals in automatically evaluating less complex cases by identifying important factors affecting patient admission.
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Affiliation(s)
- Li Luo
- Business School, Sichuan University, Chengdu, China
| | - Jialing Li
- Business School, Sichuan University, Chengdu, China
| | - Chuang Liu
- Logistics Engineering School, Chengdu Vocational & Technical College of Industry, Chengdu, China
| | - Wenwu Shen
- Outpatient Department, West China Hospital of Sichuan University, Chengdu, China
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Mukhopadhyay S, Samaddar S, Solis AO, Roy A. Disease Detection Analytics: A Simple Linear Convex Programming Algorithm for Breast Cancer and Diabetes Incidence Decisions. DECISION SCIENCES 2018. [DOI: 10.1111/deci.12348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Somnath Mukhopadhyay
- Department of Marketing and Management The University of Texas at El Paso El Paso TX 79968‐0544
| | - Subhashish Samaddar
- Institute for Insight and Department of Managerial Sciences Georgia State University Atlanta GA 30302 USA
| | - Adriano O. Solis
- Decision Sciences Area School of Administrative Studies York University Toronto Ontario M3J 1P3 Canada
| | - Asim Roy
- Department of Information Systems School of Business Arizona State University Tempe AZ 85281 USA
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Akbilgic O, Langham MR, Walter AI, Jones TL, Huang EY, Davis RL. A novel risk classification system for 30-day mortality in children undergoing surgery. PLoS One 2018; 13:e0191176. [PMID: 29351327 PMCID: PMC5774754 DOI: 10.1371/journal.pone.0191176] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2017] [Accepted: 12/03/2017] [Indexed: 12/21/2022] Open
Abstract
A simple, objective and accurate way of grouping children undergoing surgery into clinically relevant risk groups is needed. The purpose of this study, is to develop and validate a preoperative risk classification system for postsurgical 30-day mortality for children undergoing a wide variety of operations. The National Surgical Quality Improvement Project-Pediatric participant use file data for calendar years 2012-2014 was analyzed to determine preoperative variables most associated with death within 30 days of operation (D30). Risk groups were created using classification tree analysis based on these preoperative variables. The resulting risk groups were validated using 2015 data, and applied to neonates and higher risk CPT codes to determine validity in high-risk subpopulations. A five-level risk classification was found to be most accurate. The preoperative need for ventilation, oxygen support, inotropic support, sepsis, the need for emergent surgery and a do not resuscitate order defined non-overlapping groups with observed rates of D30 that vary from 0.075% (Very Low Risk) to 38.6% (Very High Risk). When CPT codes where death was never observed are eliminated or when the system is applied to neonates, the groupings remained predictive of death in an ordinal manner.
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Affiliation(s)
- Oguz Akbilgic
- University of Tennessee Health Science Center-Oak Ridge National Laboratory Center for Biomedical Informatics, Memphis, Tennessee, United States of America
- Department of Preventive Medicine, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America
| | - Max R. Langham
- Department of Surgery, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America
| | - Arianne I. Walter
- Department of Surgery, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America
| | - Tamekia L. Jones
- Department of Preventive Medicine, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America
- Department of Pediatrics, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America
- Children's Foundation Research Institute, Le Bonheur Children's Hospital, Memphis, Tennessee, United States of America
| | - Eunice Y. Huang
- Department of Surgery, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America
| | - Robert L. Davis
- University of Tennessee Health Science Center-Oak Ridge National Laboratory Center for Biomedical Informatics, Memphis, Tennessee, United States of America
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Cox JC, Sadiraj V, Schnier KE, Sweeney JF. Higher Quality and Lower Cost from Improving Hospital Discharge Decision Making. JOURNAL OF ECONOMIC BEHAVIOR & ORGANIZATION 2016; 131:1-16. [PMID: 28239219 PMCID: PMC5319446 DOI: 10.1016/j.jebo.2015.03.017] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
This paper reports research on improving decisions about hospital discharges - decisions that are now made by physicians based on mainly subjective evaluations of patients' discharge status. We report an experiment on uptake of our clinical decision support software (CDSS) which presents physicians with evidence-based discharge criteria that can be effectively utilized at the point of care where the discharge decision is made. One experimental treatment we report prompts physician attentiveness to the CDSS by replacing the default option of universal "opt in" to patient discharge with the alternative default option of "opt out" from the CDSS recommendations to discharge or not to discharge the patient on each day of hospital stay. We also report results from experimental treatments that implement the CDSS under varying conditions of time pressure on the subjects. The experiment was conducted using resident physicians and fourth-year medical students at a university medical school as subjects.
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Affiliation(s)
- James C. Cox
- Corresponding author: James C. Cox. Experimental Economics Center (ExCEN) and Department of Economics, Andrew Young School of Policy Studies, Georgia State University. Phone: 404-413-0200 FAX: 404-413-0195
| | - Vjollca Sadiraj
- Experimental Economics Center (ExCEN) and Department of Economics, Andrew Young School of Policy Studies, Georgia State University
| | - Kurt E. Schnier
- School of Social Sciences, Humanities and Arts, University of California, Merced
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