1
|
Ultrafast population coding and axo-somatic compartmentalization. PLoS Comput Biol 2022; 18:e1009775. [PMID: 35041645 PMCID: PMC8797191 DOI: 10.1371/journal.pcbi.1009775] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Revised: 01/28/2022] [Accepted: 12/16/2021] [Indexed: 02/05/2023] Open
Abstract
Populations of cortical neurons respond to common input within a millisecond. Morphological features and active ion channel properties were suggested to contribute to this astonishing processing speed. Here we report an exhaustive study of ultrafast population coding for varying axon initial segment (AIS) location, soma size, and axonal current properties. In particular, we studied their impact on two experimentally observed features 1) precise action potential timing, manifested in a wide-bandwidth dynamic gain, and 2) high-frequency boost under slowly fluctuating correlated input. While the density of axonal channels and their distance from the soma had a very small impact on bandwidth, it could be moderately improved by increasing soma size. When the voltage sensitivity of axonal currents was increased we observed ultrafast coding and high-frequency boost. We conclude that these computationally relevant features are strongly dependent on axonal ion channels’ voltage sensitivity, but not their number or exact location. We point out that ion channel properties, unlike dendrite size, can undergo rapid physiological modification, suggesting that the temporal accuracy of neuronal population encoding could be dynamically regulated. Our results are in line with recent experimental findings in AIS pathologies and establish a framework to study structure-function relations in AIS molecular design. In large nervous systems, a signal often diverges to hundreds or thousands of neurons. This population’s spike rate can track changes in this common input for frequencies up to several hundred Hertz. This ultrafast population response is experimentally well established and critically impacts cortical information processing. Its underlying biophysical determinants, however, are not understood. Experiments suggest that the ion channels at the axon initial segment strongly contribute to the ultrafast response, but recent theoretical studies emphasize the importance of neuron morphology and the resulting resistive coupling between axon and somato-dendritic compartments. We provide an exhaustive analysis of the population response of a simplified multi-compartment model. We vary the axo-somatic interaction and also active axonal properties and compare models at equivalent working points, avoiding bias. This approach provides a guideline for future experimental and theoretical studies. In this framework, the population response is closely associated with the AP generation speed at the AP initiation site, which is mostly determined by axonal ion channel voltage sensitivity. The resistive axo-somatic coupling has an additional modulatory influence. These insights are expected to hold for encoding mechanisms of more sophisticated models, suggesting that physiological changes to axonal ion channels could modulate the population response rapidly.
Collapse
|
2
|
Verbist C, Müller MG, Mansvelder HD, Legenstein R, Giugliano M. The location of the axon initial segment affects the bandwidth of spike initiation dynamics. PLoS Comput Biol 2020; 16:e1008087. [PMID: 32701953 PMCID: PMC7402515 DOI: 10.1371/journal.pcbi.1008087] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Revised: 08/04/2020] [Accepted: 06/22/2020] [Indexed: 11/19/2022] Open
Abstract
The dynamics and the sharp onset of action potential (AP) generation have recently been the subject of intense experimental and theoretical investigations. According to the resistive coupling theory, an electrotonic interplay between the site of AP initiation in the axon and the somato-dendritic load determines the AP waveform. This phenomenon not only alters the shape of APs recorded at the soma, but also determines the dynamics of excitability across a variety of time scales. Supporting this statement, here we generalize a previous numerical study and extend it to the quantification of the input-output gain of the neuronal dynamical response. We consider three classes of multicompartmental mathematical models, ranging from ball-and-stick simplified descriptions of neuronal excitability to 3D-reconstructed biophysical models of excitatory neurons of rodent and human cortical tissue. For each model, we demonstrate that increasing the distance between the axonal site of AP initiation and the soma markedly increases the bandwidth of neuronal response properties. We finally consider the Liquid State Machine paradigm, exploring the impact of altering the site of AP initiation at the level of a neuronal population, and demonstrate that an optimal distance exists to boost the computational performance of the network in a simple classification task. The neurons in the brain encode information through electrical impulses. The performance of a cell in terms of its ability to process and transfer information downstream thus depends heavily on the machinery of initiation of these impulses. In this work, we consider both the cell morphology and the biophysical properties of impulse initiation as the primary parameters that influence information processing in single neurons, as well as in networks. We specifically analyze the location of nerve impulse initiation along the cell’s axon and the way the neuron transfers incoming information. By using single-cell models of various complexity as well as network models, we conclude that information processing is sensitive to the geometrical details of impulse initiation.
Collapse
Affiliation(s)
- Christophe Verbist
- Molecular, Cellular, and Network Excitability Laboratory, Institute Born-Bunge and Department of Biomedical Sciences, Universiteit Antwerpen, Wilrijk, Belgium
- * E-mail: (CV); (MG)
| | - Michael G. Müller
- Institute of Theoretical Computer Science, Graz University of Technology, Graz, Austria
| | - Huibert D. Mansvelder
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Robert Legenstein
- Institute of Theoretical Computer Science, Graz University of Technology, Graz, Austria
| | - Michele Giugliano
- Molecular, Cellular, and Network Excitability Laboratory, Institute Born-Bunge and Department of Biomedical Sciences, Universiteit Antwerpen, Wilrijk, Belgium
- International School of Advanced Studies, Neuroscience Area, Trieste, Italy
- * E-mail: (CV); (MG)
| |
Collapse
|
3
|
Borda Bossana S, Verbist C, Giugliano M. Homogeneous and Narrow Bandwidth of Spike Initiation in Rat L1 Cortical Interneurons. Front Cell Neurosci 2020; 14:118. [PMID: 32625063 PMCID: PMC7313227 DOI: 10.3389/fncel.2020.00118] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Accepted: 04/14/2020] [Indexed: 12/02/2022] Open
Abstract
The cortical layer 1 (L1) contains a population of GABAergic interneurons, considered a key component of information integration, processing, and relaying in neocortical networks. In fact, L1 interneurons combine top–down information with feed-forward sensory inputs in layer 2/3 and 5 pyramidal cells (PCs), while filtering their incoming signals. Despite the importance of L1 for network emerging phenomena, little is known on the dynamics of the spike initiation and the encoding properties of its neurons. Using acute brain tissue slices from the rat neocortex, combined with the analysis of an existing database of model neurons, we investigated the dynamical transfer properties of these cells by sampling an entire population of known “electrical classes” and comparing experiments and model predictions. We found the bandwidth of spike initiation to be significantly narrower than in L2/3 and 5 PCs, with values below 100 cycle/s, but without significant heterogeneity in the cell response properties across distinct electrical types. The upper limit of the neuronal bandwidth was significantly correlated to the mean firing rate, as anticipated from theoretical studies but not reported for PCs. At high spectral frequencies, the magnitude of the neuronal response attenuated as a power-law, with an exponent significantly smaller than what was reported for pyramidal neurons and reminiscent of the dynamics of a “leaky” integrate-and-fire model of spike initiation. Finally, most of our in vitro results matched quantitatively the numerical simulations of the models as a further contribution to independently validate the models against novel experimental data.
Collapse
Affiliation(s)
- Stefano Borda Bossana
- Molecular, Cellular, and Network Excitability Laboratory, Department of Biomedical Sciences, Faculty of Pharmaceutical, Biomedical and Veterinary Sciences, Institute Born-Bunge, Universiteit Antwerpen, Wilrijk, Belgium
| | - Christophe Verbist
- Molecular, Cellular, and Network Excitability Laboratory, Department of Biomedical Sciences, Faculty of Pharmaceutical, Biomedical and Veterinary Sciences, Institute Born-Bunge, Universiteit Antwerpen, Wilrijk, Belgium
| | - Michele Giugliano
- Molecular, Cellular, and Network Excitability Laboratory, Department of Biomedical Sciences, Faculty of Pharmaceutical, Biomedical and Veterinary Sciences, Institute Born-Bunge, Universiteit Antwerpen, Wilrijk, Belgium.,Neuroscience Area, Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy
| |
Collapse
|
4
|
Morales JC, Higgs MH, Song SC, Wilson CJ. Broadband Entrainment of Striatal Low-Threshold Spike Interneurons. Front Neural Circuits 2020; 14:36. [PMID: 32655378 PMCID: PMC7326000 DOI: 10.3389/fncir.2020.00036] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Accepted: 05/19/2020] [Indexed: 11/13/2022] Open
Abstract
Striatal interneurons and spiny projection (SP) neurons are differentially tuned to spectral components of their input. Previous studies showed that spike responses of somatostatin/NPY-expressing low threshold spike (LTS) interneurons have broad frequency tuning, setting these cells apart from other striatal GABAergic interneurons and SP neurons. We investigated the mechanism of LTS interneuron spiking resonance and its relationship to non-spiking membrane impedance resonance, finding that abolition of impedance resonance did not alter spiking resonance. Because LTS interneurons are pacemakers whose rhythmic firing is perturbed by synaptic input, we tested the hypothesis that their spiking resonance arises from their phase resetting properties. Phase resetting curves (PRCs) were measured in LTS interneurons and SP neurons and used to make phase-oscillator models of both cell types. The models reproduced the broad tuning of LTS interneurons, and the differences from SP neurons. The spectral components of the PRC predicted each cell's sensitivity to corresponding input frequencies. LTS interneuron PRCs contain larger high-frequency components than SP neuron PRCs, providing enhanced responses to input frequencies above the cells' average firing rates. Thus, LTS cells can be entrained by input oscillations to which SP neurons are less responsive. These findings suggest that feedforward inhibition by LTS interneurons may regulate SP neurons' entrainment by oscillatory afferents.
Collapse
Affiliation(s)
- Juan C Morales
- Department of Biology, University of Texas at San Antonio, San Antonio, TX, United States
| | - Matthew H Higgs
- Department of Biology, University of Texas at San Antonio, San Antonio, TX, United States
| | - Soomin C Song
- Skirball Institute of Biomolecular Medicine and Neurosciences Institute, New York University School of Medicine, New York, NY, United States
| | - Charles J Wilson
- Department of Biology, University of Texas at San Antonio, San Antonio, TX, United States
| |
Collapse
|
5
|
Dynamic Gain Analysis Reveals Encoding Deficiencies in Cortical Neurons That Recover from Hypoxia-Induced Spreading Depolarizations. J Neurosci 2019; 39:7790-7800. [PMID: 31399533 DOI: 10.1523/jneurosci.3147-18.2019] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2018] [Revised: 07/23/2019] [Accepted: 07/23/2019] [Indexed: 11/21/2022] Open
Abstract
Cortical regions that are damaged by insults, such as ischemia, hypoxia, and trauma, frequently generate spreading depolarization (SD). At the neuronal level, SDs entail complete breakdown of ionic gradients, persisting for seconds to minutes. It is unclear whether these transient events have a more lasting influence on neuronal function. Here, we describe electrophysiological changes in cortical neurons after recovery from hypoxia-induced SD. When examined with standard measures of neuronal excitability several hours after recovery from SD, layer 5 pyramidal neurons in brain slices from mice of either sex appear surprisingly normal. However, we here introduce an additional parameter, dynamic gain, which characterizes the bandwidth of action potential encoding by a neuron, and thereby reflects its potential efficiency in a multineuronal circuit. We find that the ability of neurons that recover from SD to track high-frequency inputs is markedly curtailed; exposure to hypoxia did not have this effect when SD was prevented pharmacologically. Staining for Ankyrin G revealed at least a fourfold decrease in the number of intact axon initial segments in post-SD slices. Since this effect, along with the effect on encoding, was blocked by an inhibitor of the Ca2+-dependent enzyme, calpain, we conclude that both effects were mediated by the SD-induced rise in intracellular Ca2+ Although effects of calpain activation were detected in the axon initial segment, changes in soma-dendritic compartments may also be involved. Whatever the precise molecular mechanism, our findings indicate that in the context of cortical circuit function, effectiveness of neurons that survive SD may be limited.SIGNIFICANCE STATEMENT Spreading depolarization, which commonly accompanies cortical injury, entails transient massive breakdown of neuronal ionic gradients. The function of cortical neurons that recover from hypoxia-induced spreading depolarization is not obviously abnormal when tested for usual measures of neuronal excitability. However, we now demonstrate that they have a reduced bandwidth, reflecting a significant impairment of their ability to precisely encode high-frequency components of their synaptic input in output spike trains. Thus, neurons that recover from spreading depolarizations are less able to function normally as elements in the multineuronal cortical circuitry. These changes are correlated with activation of the calcium-dependent enzyme, calpain.
Collapse
|
6
|
Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro. J Neurosci 2019; 39:7648-7663. [PMID: 31346031 DOI: 10.1523/jneurosci.3169-18.2019] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Revised: 07/06/2019] [Accepted: 07/12/2019] [Indexed: 11/21/2022] Open
Abstract
Correlated electrical activity in neurons is a prominent characteristic of cortical microcircuits. Despite a growing amount of evidence concerning both spike-count and subthreshold membrane potential pairwise correlations, little is known about how different types of cortical neurons convert correlated inputs into correlated outputs. We studied pyramidal neurons and two classes of GABAergic interneurons of layer 5 in neocortical brain slices obtained from rats of both sexes, and we stimulated them with biophysically realistic correlated inputs, generated using dynamic clamp. We found that the physiological differences between cell types manifested unique features in their capacity to transfer correlated inputs. We used linear response theory and computational modeling to gain clear insights into how cellular properties determine both the gain and timescale of correlation transfer, thus tying single-cell features with network interactions. Our results provide further ground for the functionally distinct roles played by various types of neuronal cells in the cortical microcircuit.SIGNIFICANCE STATEMENT No matter how we probe the brain, we find correlated neuronal activity over a variety of spatial and temporal scales. For the cerebral cortex, significant evidence has accumulated on trial-to-trial covariability in synaptic inputs activation, subthreshold membrane potential fluctuations, and output spike trains. Although we do not yet fully understand their origin and whether they are detrimental or beneficial for information processing, we believe that clarifying how correlations emerge is pivotal for understanding large-scale neuronal network dynamics and computation. Here, we report quantitative differences between excitatory and inhibitory cells, as they relay input correlations into output correlations. We explain this heterogeneity by simple biophysical models and provide the most experimentally validated test of a theory for the emergence of correlations.
Collapse
|
7
|
Goriounova NA, Heyer DB, Wilbers R, Verhoog MB, Giugliano M, Verbist C, Obermayer J, Kerkhofs A, Smeding H, Verberne M, Idema S, Baayen JC, Pieneman AW, de Kock CP, Klein M, Mansvelder HD. Large and fast human pyramidal neurons associate with intelligence. eLife 2018; 7:41714. [PMID: 30561325 PMCID: PMC6363383 DOI: 10.7554/elife.41714] [Citation(s) in RCA: 64] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Accepted: 12/17/2018] [Indexed: 11/13/2022] Open
Abstract
It is generally assumed that human intelligence relies on efficient processing by neurons in our brain. Although grey matter thickness and activity of temporal and frontal cortical areas correlate with IQ scores, no direct evidence exists that links structural and physiological properties of neurons to human intelligence. Here, we find that high IQ scores and large temporal cortical thickness associate with larger, more complex dendrites of human pyramidal neurons. We show in silico that larger dendritic trees enable pyramidal neurons to track activity of synaptic inputs with higher temporal precision, due to fast action potential kinetics. Indeed, we find that human pyramidal neurons of individuals with higher IQ scores sustain fast action potential kinetics during repeated firing. These findings provide the first evidence that human intelligence is associated with neuronal complexity, action potential kinetics and efficient information transfer from inputs to output within cortical neurons. Our brains are made up of almost 100 billion brain cells. Each of them acts like a small chip: they collect, process and pass on information in the form of electrical signals. In brain areas that integrate different types of information, such as frontal and temporal lobes, brain cells have larger dendrites – long projections specialized to collect signals. Theoretical studies predict that larger dendrites help cells to initiate electrical signals faster. Because of difficulty in accessing human neurons, it has been unknown whether any of these features also relate to human intelligence. Previous studies have revealed that people with a higher IQ have a thicker outer layer (the cortex) in areas such as the frontal and temporal lobes. But does a thicker cortex also contain cells with larger dendrites and is their role different? To test whether smarter brains are equipped with faster and larger cells, Goriounova et al. studied 46 people who needed surgery for brain tumors or epilepsy. Each took an IQ test before the operation. To access the diseased tissue deep in the brain, the surgeon also removed small, undamaged samples of temporal lobe. These samples still contained living cells and their electrical signals were measured in the lab. The experiments showed that cells from people with a higher IQ had larger dendrites that transported information more quickly, especially when they are very active. Computer models were then used to understand how these findings can lead to more efficient information transfer in human neurons. Traditionally, research on human intelligence has focused on three main strategies: to study brain structure and function, to find genes associated with intelligence and to study the connection between our mind and behavior. Goriounova et al. are the first to take the single-cell perspective and link cell properties to human intelligence. The findings could help connect these separate approaches, and explain how genes for intelligence lead to thicker cortices and faster reaction times in people with higher IQ.
Collapse
Affiliation(s)
- Natalia A Goriounova
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Djai B Heyer
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - René Wilbers
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Matthijs B Verhoog
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Michele Giugliano
- Department of Biomedical Sciences, University of Antwerp, Antwerp, Belgium.,Department of Computer Science, University of Sheffield, Sheffield, United Kingdom.,Brain Mind Institute, Lausanne, Switzerland
| | - Christophe Verbist
- Department of Biomedical Sciences, University of Antwerp, Antwerp, Belgium
| | - Joshua Obermayer
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Amber Kerkhofs
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Harriët Smeding
- Department of Psychology, Stichting Epilepsie Instellingen Nederland (SEIN), Zwolle, The Netherlands
| | - Maaike Verberne
- Department of Psychology, Stichting Epilepsie Instellingen Nederland (SEIN), Zwolle, The Netherlands
| | - Sander Idema
- Department of Neurosurgery, VU medical center (VUmc), Amsterdam, The Netherlands
| | - Johannes C Baayen
- Department of Neurosurgery, VU medical center (VUmc), Amsterdam, The Netherlands
| | - Anton W Pieneman
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Christiaan Pj de Kock
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Martin Klein
- Department of Medical Psychology, VU medical center (VUmc), Amsterdam, The Netherlands
| | - Huibert D Mansvelder
- Department of Integrative Neurophysiology, Amsterdam Neuroscience, Center for Neurogenomics and Cognitive Research (CNCR), Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| |
Collapse
|