Similar recent selection criteria associated with different behavioural effects in two dog breeds

Cooperative but Dependent-Functional Breed Selection in Dogs Influences Human-Directed Gazing in a Difficult Object-Manipulation Task

It is still largely unknown to what extent domestication, ancestry, or recent functional selection are responsible for the behavioral differences in whether dogs look back to a human when presented with a difficult task. Here, we tested whether this ubiquitous human-related response of companion dogs would appear differently in subjects that were selected for either cooperative or independent work tasks. We tested N = 71 dogs from 18 cooperative and 18 independent breeds. Subjects learned in a five-trial warming-up phase that they could easily obtain the reward from a container. In trial six, the reward became impossible to take out from the locked container. When the task was easy, both breed groups behaved similarly, and their readiness to approach the container did not differ between the last 'solvable' and the subsequent 'unsolvable' trial. Task focus, looking at the container, touching the container for the first time, or interacting with the container with a paw or nose did not differ between the breed groups, indicating that their persistence in problem solving was similar. However, in the 'unsolvable' trial, cooperative dogs alternated their gaze more often between the container and the humans than the independent dogs did. The frequency of looking back was also higher in cooperative dogs than in the independent breeds. These are the first empirical results that suggest, in a balanced, representative sample of breeds, that the selection for different levels of cooperativity in working dogs could also affect their human-dependent behavior in a generic problem-solving situation.

Behavioural differences and similarities between dog breeds: proposing an ecologically valid approach for canine behavioural research

The behaviour of dogs holds great relevance for not only scientists from fundamental and applied research areas, but also due to the widespread roles of dogs in our societies as companions and working animals; their behaviour is also an important factor in animal and human welfare. A large proportion of dogs currently under human supervision belong to one of roughly 400 recognised breeds. Dog breeds can be characterised by distinctive, predictable and reproducible features, including some of their behavioural traits. To the scientist, the comparative analysis of the behaviour of dog breeds provides an opportunity for investigating an array of intriguing phenomena within an easily accessible model organism created from natural and human-driven evolutionary processes. There are many ways to design and conduct breed-related behavioural investigations, but such endeavours should always be based around biologically relevant research questions and lead to ecologically valid conclusions. In this review, we surveyed recent research efforts that included dog behaviour-related comparisons and applied a critical evaluation according to their methods of breed choice and the subsequent research design. Our aim was to assess whether these two fundamentally important components of experimental design provide a solid basis to reach valid conclusions. Based on 97 publications that fulfilled our selection criteria, we identified three primary methods used by researchers to select breeds for their investigations: (i) convenience sampling; (ii) hypothesis-driven, ancestry-based sampling; and (iii) hypothesis-driven, functional sampling. By using the SWOT (Strengths, Weaknesses, Opportunities, Threats) evaluation system, we highlight each of these techniques' merits and shortcomings. We identify when particular methods may be inherently unable to produce biologically meaningful results due to a mismatch between breed choice and the initial research goals. We hope that our evaluation will help researchers adopt best practices in experimental design regarding future dog breed comparisons.

Bayesian model and selection signature analyses reveal risk factors for canine atopic dermatitis

Canine atopic dermatitis is an inflammatory skin disease with clinical similarities to human atopic dermatitis. Several dog breeds are at increased risk for developing this disease but previous genetic associations are poorly defined. To identify additional genetic risk factors for canine atopic dermatitis, we here apply a Bayesian mixture model adapted for mapping complex traits and a cross-population extended haplotype test to search for disease-associated loci and selective sweeps in four dog breeds at risk for atopic dermatitis. We define 15 associated loci and eight candidate regions under selection by comparing cases with controls. One associated locus is syntenic to the major genetic risk locus (Filaggrin locus) in human atopic dermatitis. One selection signal in common type Labrador retriever cases positions across the TBC1D1 gene (body weight) and one signal of selection in working type German shepherd controls overlaps the LRP1B gene (brain), near the KYNU gene (psoriasis). In conclusion, we identify candidate genes, including genes belonging to the same biological pathways across multiple loci, with potential relevance to the pathogenesis of canine atopic dermatitis. The results show genetic similarities between dog and human atopic dermatitis, and future across-species genetic comparisons are hereby further motivated.

Long-term stress in dogs is related to the human-dog relationship and personality traits

Previously, we found that dogs belonging to the herding breed group, selected for human cooperation, synchronise their long-term stress levels with their owners. The aim of the current study was to investigate features that could influence long-term stress levels in ancient dog breeds, genetically closer to wolves, and dogs specifically selected to work independently of their owner. Twenty-four ancient breed dogs and 18 solitary hunting dogs were recruited and hair samples were obtained from both dogs and owners from which hair cortisol concentration (HCC) was analysed. Additionally, the owners completed lifestyle surveys, the Monash Dog Owner Relationship Scale (MDORS) on human–dog relationship, and both dog and owner personality questionnaires (Dog Personality questionnaire and Big Five Inventory survey). The results from the MDORS indicate that the subscale Perceived cost correlated to the dog HCC of tested breed groups: solitary hunting breeds (χ² = 4.95, P = 0.026, β = 0.055), ancient breeds (χ² = 2.74, P = 0.098, β = 0.027), and herding dogs included from a previous study (χ² = 6.82, P = 0.009, β = − 0.061). The HCC of the solitary hunting dogs was also related to the owner personality traits Agreeableness (χ² = 12.30, P < 0.001, β = − 0.060) and Openness (χ² = 9.56, P = 0.002, β = 0.048) suggesting a more substantial influence of the owner on the solitary hunting dog’s HCC compared to the ancient breeds. No effect of owner HCC on dog HCC was found in either ancient or in solitary hunting breeds. Hence, the long-term stress synchronisation is likely to be a trait in breeds selected for human cooperation. In conclusion, dog HCC is often related to the owners’ personality, but is primarily influenced by the owner-dog relationship.

DNA methylation in canine brains is related to domestication and dog-breed formation

Epigenetic factors such as DNA methylation act as mediators in the interaction between genome and environment. Variation in the epigenome can both affect phenotype and be inherited, and epigenetics has been suggested to be an important factor in the evolutionary process. During domestication, dogs have evolved an unprecedented between-breed variation in morphology and behavior in an evolutionary short period. In the present study, we explore DNA methylation differences in brain, the most relevant tissue with respect to behavior, between wolf and dog breeds. We optimized a combined method of genotype-by-sequencing (GBS) and methylated DNA immunoprecipitation (MeDIP) for its application in canines. Genomic DNA from the frontal cortex of 38 dogs of 8 breeds and three wolves was used. GBS and GBS-MeDIP libraries were prepared and sequenced on Illuma HiSeq2500 platform. The reduced sample represented 1.18 ± 0.4% of the total dog genome (2,4 billion BP), while the GBS-MeDIP covered 11,250,788 ± 4,042,106 unique base pairs. We find substantial DNA methylation differences between wolf and dog and between the dog breeds. The methylation profiles of the different groups imply that epigenetic factors may have been important in the speciation from dog to wolf, but also in the divergence of different dog breeds. Specifically, we highlight methylation differences in genes related to behavior and morphology. We hypothesize that these differences are involved in the phenotypic variation found among dogs, whereas future studies will have to find the specific mechanisms. Our results not only add an intriguing new dimension to dog breeding but are also useful to further understanding of epigenetic involvement.

Effects of size and personality on social learning and human-directed behaviour in horses (Equus caballus)

Due to our long history of living in close association with horses, these animals are suggested to have enhanced skills in understanding and communicating with humans. Today, horses have become important to humans for sport and leisure and their understanding of human behaviour and their human-directed behaviour are therefore of great importance. In this study, we investigated 22 horses in a human contact-seeking experiment where they were presented with an unsolvable problem and a detour experiment with a human demonstrator. The unsolvable problem consisted of pieces of carrot in a closed bucket and the detour resembled the shape of V. Additionally, personality traits of the participating horses were assessed. Interestingly, the full-sized horses (N = 11) showed more human-related behaviours when presented with an unsolvable problem compared to before the carrots were made unreachable (p = 0.033), while the ponies (N = 11) did not. However, neither the full-sized horses nor the ponies were significantly more successful in the detour after human demonstrations than in control trials. When comparing the two experiments, we found the task-oriented behaviour in the detour test to positively correlate with human proximity and eye contact-seeking behaviour towards humans during the unsolvable problem in the contact-seeking test. Interestingly, again this was only true for the full-sized horses (p < 0.05) and not for the ponies. From the horse personality questionnaire results, the traits excitability and anxiousness revealed strong negative correlations with human-directed behaviour in the contact-seeking experiment (p < 0.05). Hence, size (full-sized horse/pony) and personality influenced the human-related behaviours of the horses and we suggest a future focus on these aspects to deepen our understanding of human-horse communication.

Sociality genes are associated with human-directed social behaviour in golden and Labrador retriever dogs

Background

Dogs have human-directed social skills that allow them to communicate and cooperate with humans. We have previously identified two loci on chromosome 26 associated with human contact-seeking behaviors during an unsolvable problem task in laboratory beagles (Persson et al., 2016). The aim of the present study was to verify the single nucleotide polymorphisms (SNPs) in additional dog breeds. We also studied how the allele frequencies have changed during domestication and recent selection.

Methods

Dogs of two breeds, 61 golden retrievers and 100 Labrador retrievers, were phenotyped and genotyped, and 19 wolves were genotyped. The Labrador retrievers were divided into common and field type by pedigree data to make it possible to study the effects of recent selection. All dogs were tested in an unsolvable problem task where human-directed social behaviors were scored. DNA from dogs (buccal swabs) and wolves (blood or brain tissue) was analyzed for genotype on two of the previously identified SNP markers, BICF2G630798942 (SNP1) and BICF2S23712114 (SNP2), by pyrosequencing.

Results

There was genetic variation for SNP1 in both dog breeds whereas the wolves were fixed for this polymorphism, and for SNP2 there was variation in both dogs and wolves. For both SNPs, Labrador retriever types differed significantly in allele frequencies. We found associations between SNPs and human-directed social behavior in both dog breeds. In golden retrievers, SNP1 was associated with physical contact variables, for example, with the duration of physical contact with the owner (F _2,56 = 4.389, p = 0.017). SNP2 was associated with several behavioral variables in both breeds, among others owner gazing frequency in both golden retrievers (F _2,55 = 6.330, p = 0.003) and Labradors (F _1,93 = 5.209, p = 0.025).

Discussion

Our results verify the association between the previously identified SNPs and human-directed social behavior scored in an unsolvable problem task. Differences in allele frequencies suggest that these loci have been affected by selection. The results indicate that these genomic regions are involved in human-directed social behavior in not only beagles but in other dog breeds as well. We hypothesize that they may have been important during dog domestication.

The influence of spaying and its timing relative to the onset of puberty on urinary and general behaviour in Labrador Retrievers

Benefits and risks of spaying on the behaviour of female dogs are controversially discussed. Increased aggressiveness and male urinary behaviour were postulated to be the consequence of masculinization after spaying in some female dogs. To investigate if spaying or its timing relative to the onset of puberty may have a masculinization effect, urinary behaviour, that is, frequency of urination, urinary posture and ground scratching after urination were recorded in 58 female Labrador Retrievers during 15 min of a daily walk with their owners. General behaviour of the dogs during the walks was assessed using an owner questionnaire. Data were analysed for age, reproductive status, lifetime of ovary exposure and/or time interval since spaying. Urinary behaviour of intact females (n = 12) and dogs spayed before (n = 17) or after (n = 29) puberty was similar and not influenced by age, lifetime of ovary exposure and/or time interval since spaying. Owners of spayed dogs described more frequent or more intense fear reaction in their animals in response to loud noises, unfamiliar objects approaching on or near the sidewalk, or if they were approached by unknown dogs barking, growling or jumping. In conclusion, we found no evidence of a masculinization effect after spaying on urinary behaviour in female Labrador Retrievers. In contrast to popular belief, gonadectomy did not inevitably result in a behaviourally more stable dog. Extrapolation of our findings from female Labrador Retrievers to other breeds should be performed with caution, as the effect of spaying on behaviour may differ among dog breeds.

Association between COMT SNP variation and timidity in Golden and Labrador Retrievers

Timidity in dogs is a trait with high heritability. However, the relevant genetic factors and markers associated with this condition are largely unknown. The function of the catechol-O-methyl transferase (COMT) gene has been found to be associated with human fearful or anxious emotions, and the COMT:p.Val158Met polymorphism locus is significantly related to anxious behavior. In the present study, the correlation between timidity and four single nucleotide polymorphism (SNP) variations (C.-1666C>G c.39A>G, c.216G>A, c.482G>A) of the COMT gene was investigated in dogs. The evaluation was based on the dog courage assessment assay and a genotype and haplotype analysis in Labrador Retrievers (LR) and Golden Retrievers (GR). The principal components analysis factor structure of the courage phenotype was invariant between LR and GR. Sex, breed and age had no statistically significant effect on the timidity of the dogs. All SNP loci detected were in Hardy-Weinberg equilibrium. The c.39A>G locus was removed in the subsequent association analysis due to the significant difference between LR and GR in genotype distributions. Intriguingly, the genotypes and haplotypes of the COMT gene were significantly and highly correlated with the timidity of LR and GR. The A alleles of the COMT:c.216G>A and c.482G>A loci appeared to play a dominant role in the timid behavior of the dogs. This result supports and broadens the warrior/worrier hypothesis and will have important implications for the understanding of the evolution of temperament in dogs. Additionally, the results provide predictive genetic markers for temperament in dogs.

Post-Adoption Problem Behaviours in Adolescent and Adult Dogs Rehomed through a New Zealand Animal Shelter

Simple Summary

Problem behaviours in dogs rehomed through animal shelters can jeopardise the long-term success of adoptions if not correctly managed. Data from 61 adolescent and adult dog adoptions that occurred through an animal shelter in Auckland, New Zealand, was analysed to identify the most common problem behaviours affecting adopted dogs and how concerned the new owners were about these problem behaviours. The majority of dogs had at least one reported problem behaviour; the most frequently reported problem behaviours were poor manners, destruction of household items, and excessively high energy. Very few dogs showed territorial aggression when objects or food items were removed, but aggression toward people or other dogs were both reported in nearly a fifth of dogs. The majority (87%) of adopters whose dog had some problem behaviours were not concerned at all or were a little concerned, and only three adopters were very concerned. Based on our interpretation of these findings, post-adoption support programmes targeted toward teaching adopters how to correctly train their dogs may be beneficial to increasing adoption satisfaction.

Abstract

Problem behaviours in dogs rehomed through animal shelters can jeopardise the long-term success of adoptions. In this study, data from 61 adolescent and adult dog adoptions that occurred through an animal shelter in Auckland, New Zealand, from 1 November 2015 to 31 July 2016 were analysed to describe the frequency of problem behaviours and level of adopter concern at different time points post-adoption. Amongst the 57 dogs with behavioural information available, 40 (70%) had at least one reported problem behaviour, and the most frequently reported problem behaviours were poor manners (46%), destruction of household items (30%), and excessively high energy (28%). Very few dogs showed territorial aggression when objects or food items were removed (2% and 4%, respectively). However, aggression toward people or other dogs was frequently reported (19% and 19%, respectively). Of the 54 adopters that provided a response about their level of concern over their dog’s problem behaviours, 24 (44%) were not concerned at all, 23 (43%) were a little concerned, 4 (7%) were moderately concerned, and 3 (6%) were very concerned. Based on our interpretation of these findings, post-adoption support programmes targeted toward teaching adopters how to correctly train their dogs may be beneficial to increasing adoption satisfaction.

Studies of modern Italian dog populations reveal multiple patterns for domestic breed evolution

Through thousands of years of breeding and strong human selection, the dog (Canis lupus familiaris) exists today within hundreds of closed populations throughout the world, each with defined phenotypes. A singular geographic region with broad diversity in dog breeds presents an interesting opportunity to observe potential mechanisms of breed formation. Italy claims 14 internationally recognized dog breeds, with numerous additional local varieties. To determine the relationship among Italian dog populations, we integrated genetic data from 263 dogs representing 23 closed dog populations from Italy, seven Apennine gray wolves, and an established dataset of 161 globally recognized dog breeds, applying multiple genetic methods to characterize the modes by which breeds are formed within a single geographic region. Our consideration of each of five genetic analyses reveals a series of development events that mirror historical modes of breed formation, but with variations unique to the codevelopment of early dog and human populations. Using 142,840 genome-wide SNPs and a dataset of 1,609 canines, representing 182 breeds and 16 wild canids, we identified breed development routes for the Italian breeds that included divergence from common populations for a specific purpose, admixture of regional stock with that from other regions, and isolated selection of local stock with specific attributes.

Aggressiveness as a latent personality trait of domestic dogs: Testing local independence and measurement invariance

Studies of animal personality attempt to uncover underlying or “latent” personality traits that explain broad patterns of behaviour, often by applying latent variable statistical models (e.g., factor analysis) to multivariate data sets. Two integral, but infrequently confirmed, assumptions of latent variable models in animal personality are: i) behavioural variables are independent (i.e., uncorrelated) conditional on the latent personality traits they reflect (local independence), and ii) personality traits are associated with behavioural variables in the same way across individuals or groups of individuals (measurement invariance). We tested these assumptions using observations of aggression in four age classes (4–10 months, 10 months–3 years, 3–6 years, over 6 years) of male and female shelter dogs (N = 4,743) in 11 different contexts. A structural equation model supported the hypothesis of two positively correlated personality traits underlying aggression across contexts: aggressiveness towards people and aggressiveness towards dogs (comparative fit index: 0.96; Tucker-Lewis index: 0.95; root mean square error of approximation: 0.03). Aggression across contexts was moderately repeatable (towards people: intraclass correlation coefficient (ICC) = 0.479; towards dogs: ICC = 0.303). However, certain contexts related to aggressiveness towards people (but not dogs) shared significant residual relationships unaccounted for by latent levels of aggressiveness. Furthermore, aggressiveness towards people and dogs in different contexts interacted with sex and age. Thus, sex and age differences in displays of aggression were not simple functions of underlying aggressiveness. Our results illustrate that the robustness of traits in latent variable models must be critically assessed before making conclusions about the effects of, or factors influencing, animal personality. Our findings are of concern because inaccurate “aggressive personality” trait attributions can be costly to dogs, recipients of aggression and society in general.

Breed, sex, and litter effects in 2-month old puppies' behaviour in a standardised open-field test

A considerable number of studies have reported differences among dog breeds with respect to their genetic profile, cognitive abilities or personality traits. Each dog breed is normally treated as a homogeneous group, however, researchers have recently questioned whether the behavioural profile of modern breeds still reflects their historical function or if the intense divergent selective pressures and geographical barriers have created a more fragmented picture. The majority of studies attempting to assess and compare modern breeds’ personality focused on the evaluation of adult dogs where the potential effects of environmental/human factors on the dogs’ behaviour are hard to discern from their genetic heritage. In the following study, we aimed at investigating between- and within-breed differences in the personality of two-months-old puppies by direct behavioural observation of 377 puppies from 12 breeds. Results showed that there was no effect of sex, however both breed and litter, significantly affected all personality traits. Breed on average explained 10% of the variance, whereas the effect of litter was noticeably higher, explaining on average 23% of the variance. Taken together, our results suggest that breed does have some influence on personality traits, but they also highlight the importance of taking litter effects into account.

The Genetics of How Dogs Became Our Social Allies

Dogs were domesticated from wolves about 15,000 years ago, and an important selection pressure (intentional or unintentional) has been their ability to communicate and cooperate with people. They show extensive human-directed sociability, which varies within as well as between breeds and is not shared by ancestral wolves. Hence, dogs are potentially ideal models for studying the genetics of social behavior. Here, we review some recent research carried out by us and others on this subject. We present results showing that recent selection of different breed types can be used as a model system for investigating the genetic architecture of personalities. Furthermore, we review data showing that human-directed social behavior is significantly related to a small number of genes that have known connections to human social disorders such as autism and schizophrenia. We suggest that dogs are excellent study subjects for analyzing the evolution and genetics of social behavior and can serve as probes for human health and welfare.