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Caicedo-Martínez LS, Henao-Osorio JJ, Arias-Monsalve HF, Rojas-Morales JA, Ossa-López PA, Rivera-Páez FA, Ramírez-Chaves HE. A new species of terrestrial toad of the Rhinellafestae group (Anura, Bufonidae) from the highlands of the Central Cordillera of the Andes of Colombia. Zookeys 2024; 1196:149-175. [PMID: 38566619 PMCID: PMC10985400 DOI: 10.3897/zookeys.1196.114861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2023] [Accepted: 02/21/2024] [Indexed: 04/04/2024] Open
Abstract
The genus Rhinella (Bufonidae) comprises 92 species of Neotropical toads. In Colombia, Rhinella is represented by 22 recognized species, of which nine belong to the Rhinellafestae group. Over the past decade, there has been increasing evidence of cryptic diversity within this group, particularly in the context of Andean forms. Specimens of Rhinella collected in high Andean forests on both slopes of the Central Cordillera in Colombia belong to an undescribed species, Rhinellakumandaysp. nov. Genetic analyses using the mitochondrial 16S rRNA gene indicated that the individuals belong to the festae species group. However, they can be distinguished from other closely related species such as Rhinellaparaguas and Rhinellatenrec by a combination of morphological traits including the presence of tarsal fold, a moderate body size, and substantial genetic divergence in the 16S rRNA gene (> 5%). Through this integrative approach, the specimens from the Central Cordillera of Colombia are considered an evolutionary divergent lineage that is sister to R.paraguas, and described as a new species. Rhinellakumandaysp. nov. is restricted to the Central Cordillera of Colombia inhabiting both slopes in the departments of Caldas and Tolima, in an elevational range between 2420 and 3758 m. With the recognition of this new species, the genus Rhinella now comprises 93 species with 23 of them found in Colombia, and ten species endemic to the country.
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Affiliation(s)
- Luis Santiago Caicedo-Martínez
- Natural History Laboratory, Integrative Zoological Biodiversity Discovery, Centro de Museos, Museo de Historia Natural, Universidad de Caldas, Carrera 23 # 58-65, Manizales 170004, Colombia
| | - Jose J. Henao-Osorio
- Natural History Laboratory, Integrative Zoological Biodiversity Discovery, Centro de Museos, Museo de Historia Natural, Universidad de Caldas, Carrera 23 # 58-65, Manizales 170004, Colombia
| | - Héctor Fabio Arias-Monsalve
- Natural History Laboratory, Integrative Zoological Biodiversity Discovery, Centro de Museos, Museo de Historia Natural, Universidad de Caldas, Carrera 23 # 58-65, Manizales 170004, Colombia
- Programa de Biología, Facultad de Ciencias Exactas y Naturales, Universidad de Caldas, Calle 65 No. 26-10, Manizales 170004, Colombia
| | - Julián Andrés Rojas-Morales
- Natural History Laboratory, Integrative Zoological Biodiversity Discovery, Centro de Museos, Museo de Historia Natural, Universidad de Caldas, Carrera 23 # 58-65, Manizales 170004, Colombia
| | - Paula A. Ossa-López
- Natural History Laboratory, Integrative Zoological Biodiversity Discovery, Centro de Museos, Museo de Historia Natural, Universidad de Caldas, Carrera 23 # 58-65, Manizales 170004, Colombia
| | | | - Héctor E. Ramírez-Chaves
- Natural History Laboratory, Integrative Zoological Biodiversity Discovery, Centro de Museos, Museo de Historia Natural, Universidad de Caldas, Carrera 23 # 58-65, Manizales 170004, Colombia
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2
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Souza LHB, Pierson TW, Tenório RO, Ferro JM, Gatto KP, Silva BC, de Andrade GV, Suárez P, Haddad CFB, Lourenço LB. Multiple contact zones and karyotypic evolution in a neotropical frog species complex. Sci Rep 2024; 14:1119. [PMID: 38212602 PMCID: PMC10784582 DOI: 10.1038/s41598-024-51421-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Accepted: 01/04/2024] [Indexed: 01/13/2024] Open
Abstract
Previous studies of DNA sequence and karyotypic data have revealed high genetic diversity in the Physalaemus cuvieri - Physalaemus ephippifer species complex-a group of small leptodactylid frogs in South America. To date, seven major genetic lineages have been recognized in this group, with species delimitation tests supporting four to seven of them as valid species. Among these, only P. ephippifer shows heteromorphic sex chromosomes, but the implications of cytogenetic divergence for the evolution of this group are unknown. We analyzed karyotypic, mitochondrial DNA, and 3RAD genomic data to characterize a putative contact zone between P. ephippifer and P. cuvieri Lineage 1, finding evidence for admixture and karyotypic evolution. We also describe preliminary evidence for admixture between two other members of this species complex-Lineage 1 and Lineage 3 of P. cuvieri. Our study sheds new light on evolutionary relationships in the P. cuvieri - P. ephippifer species complex, suggesting an important role of karyotypic divergence in its evolutionary history and underscoring the importance of hybridization as a mechanism of sex chromosome evolution in amphibians.
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Affiliation(s)
- Lucas H B Souza
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), Campinas, SP, 13083-863, Brazil.
| | - Todd W Pierson
- Department of Ecology, Evolution, and Organismal Biology, Kennesaw State University, Kennesaw, GA, USA
| | - Renata O Tenório
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), Campinas, SP, 13083-863, Brazil
| | - Juan M Ferro
- Laboratorio de Genética Evolutiva "Dr. Claudio J. Bidau", Instituto de Biología Subtropical (CONICET-UNaM), Facultad de Ciencias Exactas, Químicas y Naturales, Universidad Nacional de Misiones, Posadas, Misiones, Argentina
| | - Kaleb P Gatto
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), Campinas, SP, 13083-863, Brazil
| | - Bruno C Silva
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), Campinas, SP, 13083-863, Brazil
| | - Gilda V de Andrade
- Departamento de Biologia, Centro de Ciências Biológicas e da Saúde, Universidade Federal do Maranhão (UFMA), Campus do Bacanga, São Luís, MA, 65080-040, Brazil
| | - Pablo Suárez
- Instituto de Biología Subtropical (CONICET-UNaM), Puerto Iguazú, Argentina
| | - Célio F B Haddad
- Departamento de Biodiversidade and Centro de Aquicultura (CAUNESP), Instituto de Biociências, Universidade Estadual Paulista, Rio Claro, SP, Brazil
| | - Luciana B Lourenço
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), Campinas, SP, 13083-863, Brazil
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3
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Pearson KC, Tarvin RD. A review of chemical defense in harlequin toads (Bufonidae: Atelopus). Toxicon X 2022; 13:100092. [PMID: 35146414 PMCID: PMC8801762 DOI: 10.1016/j.toxcx.2022.100092] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2021] [Revised: 01/12/2022] [Accepted: 01/17/2022] [Indexed: 12/29/2022] Open
Abstract
Toads of the genus Atelopus are chemically defended by a unique combination of endogenously synthesized cardiotoxins (bufadienolides) and neurotoxins which may be sequestered (guanidinium alkaloids). Investigation into Atelopus small-molecule chemical defenses has been primarily concerned with identifying and characterizing various forms of these toxins while largely overlooking their ecological roles and evolutionary implications. In addition to describing the extent of knowledge about Atelopus toxin structures, pharmacology, and biological sources, we review the detection, identification, and quantification methods used in studies of Atelopus toxins to date and conclude that many known toxin profiles are unlikely to be comprehensive because of methodological and sampling limitations. Patterns in existing data suggest that both environmental (toxin availability) and genetic (capacity to synthesize or sequester toxins) factors influence toxin profiles. From an ecological and evolutionary perspective, we summarize the possible selective pressures acting on Atelopus toxicity and toxin profiles, including predation, intraspecies communication, disease, and reproductive status. Ultimately, we intend to provide a basis for future ecological, evolutionary, and biochemical research on Atelopus.
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Affiliation(s)
- Kannon C. Pearson
- Museum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, CA, 94720, USA
| | - Rebecca D. Tarvin
- Museum of Vertebrate Zoology and Department of Integrative Biology, University of California Berkeley, Berkeley, CA, 94720, USA
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4
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Barrasso DA, Úbeda CA, Cotichelli L, Basso NG. On the presence of Alsodes coppingeri (Anura, Alsodidae) in Argentina, with comments on other southern Alsodes. NEOTROPICAL BIODIVERSITY 2022. [DOI: 10.1080/23766808.2022.2029321] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022] Open
Affiliation(s)
- Diego A. Barrasso
- Instituto de Diversidad y Evolución Austral (IDEAus-CONICET), Puerto Madryn, Chubut, Argentina
- Facultad de Ciencias Naturales y Ciencias de la Salud Universidad Nacional de la Patagonia “San Juan Bosco” (UNPSJB), Puerto Madryn, Chubut, Argentina
| | - Carmen A. Úbeda
- Departamento de Zoología, Centro Regional Bariloche, Universidad Nacional del Comahue (UNCo), San Carlos de Bariloche, Río Negro, Argentina
| | - Leonardo Cotichelli
- Instituto de Diversidad y Evolución Austral (IDEAus-CONICET), Puerto Madryn, Chubut, Argentina
| | - Néstor G. Basso
- Instituto de Diversidad y Evolución Austral (IDEAus-CONICET), Puerto Madryn, Chubut, Argentina
- Facultad de Ciencias Naturales y Ciencias de la Salud Universidad Nacional de la Patagonia “San Juan Bosco” (UNPSJB), Puerto Madryn, Chubut, Argentina
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5
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Do host habitat use and cospeciation matter in the evolution of Oswaldocruzia (Nematoda, Molineidae) from neotropical amphibians? J Helminthol 2021; 95:e33. [PMID: 34227463 DOI: 10.1017/s0022149x21000250] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
The genus Oswaldocruzia Travassos, 1917 includes approximately 90 species that are parasitic on amphibians and reptiles around the world, of which 43 occur in the neotropical region. However, molecular data supporting the taxonomic status of most species of the genus are scarce, and their phylogenetic relationships remain unknown. Using specimens of four molineid taxa (Oswaldocruzia belenensis Santos, Giese, Maldonado Jr. and Lanfredi, 2008; Oswaldocruzia chabaudi Ben Slimane & Durette-Desset, 1996, Oswaldocruzia chambrieri Ben Slimane & Durette-Desset, 1996 and Kentropyxia hylae Feitosa, Furtado, Santos and Melo, 2015) from amphibian hosts collected in different regions of Pará, Brazil, we conducted morphological studies, molecular analyses and phylogenies (maximum likelihood and Bayesian inference) using the cytochrome c oxidase subunity I (Cox1) gene. The newly generated sequences were compared with those of ten publicly available Cox1 sequences of Oswaldocruzia from Mexico. Our findings demonstrated significant differences between the sequences of amazonian specimens and sequences from specimens collected in Mexico, and we suggest that host-parasite cospeciation or habitat use might be related to molineid evolution in amphibian hosts. Additionally, this work presents new hosts and new geographical records for species of Oswaldocruzia from the neotropics.
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Deforel F, Duport-Bru AS, Rosset SD, Baldo D, Candioti FV. Osteological Atlas of Melanophryniscus (Anura, Bufonidae): A Synthesis after 150 Years of Skeletal Studies in the Genus. HERPETOLOGICAL MONOGRAPHS 2021. [DOI: 10.1655/herpmonographs-d-20-00002] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Facundo Deforel
- Unidad Ejecutora Lillo (CONICET - FML), 4000 San Miguel de Tucumán, Argentina
| | | | - Sergio Daniel Rosset
- Sección Herpetología, División Zoología Vertebrados, Facultad de Ciencias Naturales y Museo, Universidad Nacional de La Plata, 1900 La Plata, Argentina
| | - Diego Baldo
- Laboratorio de Genética Evolutiva “Claudio Juan Bidau,” Instituto de Biología Subtropical (CONICET - UNaM), Facultad de Ciencias Exactas, Universidad Nacional de Misiones, 3300 Posadas, Argentina
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7
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Pereyra MO, Blotto BL, Baldo D, Chaparro JC, Ron SR, Elias-Costa AJ, Iglesias PP, Venegas PJ, C. Thomé MT, Ospina-Sarria JJ, Maciel NM, Rada M, Kolenc F, Borteiro C, Rivera-Correa M, Rojas-Runjaic FJ, Moravec J, De La Riva I, Wheeler WC, Castroviejo-Fisher S, Grant T, Haddad CF, Faivovich J. Evolution in the Genus Rhinella: A Total Evidence Phylogenetic Analysis of Neotropical True Toads (Anura: Bufonidae). BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY 2021. [DOI: 10.1206/0003-0090.447.1.1] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Affiliation(s)
- Martín O. Pereyra
- Martín O. Pereyra: División Herpetología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”–CONICET, Buenos Aires; and Laboratorio de Genética Evolutiva “Claudio J. Bidau,” Instituto de Biología Subtropical (IBS, CONICET), Universidad Naci
| | - Boris L. Blotto
- Boris L. Blotto: División Herpetología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”–CONICET, Buenos Aires; Universidade Estadual Paulista (UNESP), Instituto de Biociências, Departamento de Biodiversidade e Centro de Aquicultura (CAUN
| | - Diego Baldo
- Diego Baldo: Laboratorio de Genética Evolutiva “Claudio J. Bidau,” Instituto de Biología Subtropical (IBS, CONICET), Universidad Nacional de Misiones (UNaM), Posadas, Misiones, Argentina
| | - Juan C. Chaparro
- Juan C. Chaparro: Museo de Biodiversidad del Perú, Cusco, Perú; and Museo de Historia Natural de la Universidad Nacional de San Antonio Abad del Cusco, Paraninfo Universitario, Cusco
| | - Santiago R. Ron
- Santiago R. Ron: Museo de Zoología, Escuela de Biología, Pontificia Universidad Católica del Ecuador, Quito
| | - Agustín J. Elias-Costa
- Agustín J. Elias-Costa: División Herpetología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”–CONICET, Buenos Aires
| | - Patricia P. Iglesias
- Patricia P. Iglesias: Laboratorio de Genética Evolutiva “Claudio J. Bidau”, Instituto de Biología Subtropical (IBS, CONICET), Universidad Nacional de Misiones (UNaM), Posadas, Misiones, Argentina
| | - Pablo J. Venegas
- Pablo J. Venegas: División de Herpetología-Centro de Ornitología y Biodiversidad (CORBIDI), Surco, Lima
| | - Maria Tereza C. Thomé
- Maria Tereza C. Thomé: Universidade Estadual Paulista (UNESP), Instituto de Biociências, Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP), Rio Claro, São Paulo
| | - Jhon Jairo Ospina-Sarria
- Jhon Jairo Ospina-Sarria: Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, São Paulo, Brazil; and Calima, Fundación para la Investigación de la Biodiversidad y Conservación en el Trópico, Cali
| | - Natan M. Maciel
- Natan M. Maciel: Laboratório de Herpetologia e Comportamento Animal, Departamento de Ecologia, Instituto de Ciências Biológicas, Universidade Federal de Goiás, Goiânia, Brazil
| | - Marco Rada
- Marco Rada: Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, São Paulo
| | - Francisco Kolenc
- Francisco Kolenc: Sección Herpetología, Museo Nacional de Historia Natural, Montevideo
| | - Claudio Borteiro
- Claudio Borteiro: Sección Herpetología, Museo Nacional de Historia Natural, Montevideo
| | - Mauricio Rivera-Correa
- Mauricio Rivera-Correa: Grupo Herpetológico de Antioquia, Instituto de Biología, Universidad de Antioquia, Medellín
| | - Fernando J.M. Rojas-Runjaic
- Fernando J.M. Rojas-Runjaic: Fundación La Salle de Ciencias Naturales, Museo de Historia Natural La Salle (MHNLS), Venezuela; and Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS), Porto Alegre, Rio Grande do Sul, Brazil
| | - Jiří Moravec
- Jiří Moravec: Department of Zoology, National Museum, Prague, Czech Republic
| | - Ignacio De La Riva
- Ignacio de la Riva: Museo Nacional de Ciencias Naturales (MNCN-CSIC), Madrid
| | - Ward C. Wheeler
- Ward C. Wheeler: Division of Invertebrate Zoology, American Museum of Natural History, New York
| | - Santiago Castroviejo-Fisher
- Santiago Castroviejo-Fisher: Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS), Porto Alegre, Rio Grande do Sul, Brazil; and Research Associate, Herpetology, Division of Vertebrate Zoology, American Museum of Natural History, New York
| | - Taran Grant
- Taran Grant: Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, São Paulo; and Research Associate, Herpetology, Division of Vertebrate Zoology, American Museum of Natural History, New York
| | - Célio F.B. Haddad
- Célio F.B. Haddad: Universidade Estadual Paulista (UNESP), Instituto de Biociências, Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP), Rio Claro, São Paulo
| | - Julián Faivovich
- Julián Faivovich: División Herpetología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”–CONICET, Buenos Aires; Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires,
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Vittorazzi SE, Lourenço LB, Zattera ML, Weber LN, Recco-Pimentel SM, Bruschi DP. Cytogenetic and genetic data support Crossodactylus aeneus Müller, 1924 as a new junior synonym of C. gaudichaudii Duméril and Bibron, 1841 (Amphibia, Anura). Genet Mol Biol 2021; 44:e20200301. [PMID: 33751017 PMCID: PMC7995990 DOI: 10.1590/1678-4685-gmb-2020-0301] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Accepted: 02/08/2021] [Indexed: 01/24/2023] Open
Abstract
The nominal anuran species Crossodactylus gaudichaudii Duméril and Bibron, 1841 and Crossodactylus aeneus Müller, 1924 are indistinguishable based on adult and larval morphology, being subject of taxonomic doubts. Here, we describe the karyotypes of C. gaudichaudii and C. aeneus, using classical and molecular cytogenetic markers. In addition, we used sequences of the H1 mitochondrial DNA to infer their phylogenetic relationships by Maximum Likelihood (ML) and Maximum Parsimony (MP) approaches and species delimitation test (by bPTP approach). The karyotypic data do not differentiate C. gaudichaudii and C. aeneus in any of the chromosome markers assessed. In both phylogenetic analyses, C. gaudichaudii and C. aeneus were recovered into a strongly supported clade. The species delimitation analysis recovered the specimens assigned to C. gaudichaudii and C. aeneus as a single taxonomic unit. Taken the cytogenetic and genetic results together with previous studies of internal and external morphology of tadpoles and biacoustic pattern, C. gaudichaudii and C. aeneus could not be differentiated, which supports the hypothesis that they correspond to the same taxonomic unit, with C. aeneus being a junior synonym of C. gaudichaudii.
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Affiliation(s)
- Stenio Eder Vittorazzi
- Universidade do Estado de Mato Grosso, Faculdade de Ciências
Biológicas, Agrárias e da Saúde, Departamento de Ciências Biológicas, Tangará da
Serra, MT, Brazil
- Universidade Federal do Paraná, Setor de Ciências Biológicas,
Departamento de Genética, Programa de Pós-Graduação em Genética, Curitiba, PR,
Brazil
| | - Luciana Bolsoni Lourenço
- Universidade Estadual de Campinas, Instituto de Biologia,
Departamento de Biologia Estrutural e Funcional, Campinas, SP, Brazil
| | - Michelle Louise Zattera
- Universidade Federal do Paraná, Setor de Ciências Biológicas,
Departamento de Genética, Programa de Pós-Graduação em Genética, Curitiba, PR,
Brazil
| | - Luiz Norberto Weber
- Universidade Federal do Sul da Bahia, Instituto Sosígenes Costa de
Humanidades, Artes e Ciências, Porto Seguro, BA, Brazil
| | - Shirlei Maria Recco-Pimentel
- Universidade Estadual de Campinas, Instituto de Biologia,
Departamento de Biologia Estrutural e Funcional, Campinas, SP, Brazil
| | - Daniel Pacheco Bruschi
- Universidade Federal do Paraná, Setor de Ciências Biológicas,
Departamento de Genética, Programa de Pós-Graduação em Genética, Curitiba, PR,
Brazil
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Motta AP, Taucce PPG, Haddad CFB, Canedo C. A new terraranan genus from the Brazilian Atlantic Forest with comments on the systematics of Brachycephaloidea (Amphibia: Anura). J ZOOL SYST EVOL RES 2021. [DOI: 10.1111/jzs.12452] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ana Paula Motta
- Laboratório de Herpetologia Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP) Instituto de Biociências Universidade Estadual Paulista Rio Claro Brazil
| | - Pedro Paulo Goulart Taucce
- Laboratório de Herpetologia Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP) Instituto de Biociências Universidade Estadual Paulista Rio Claro Brazil
| | - Célio Fernando Baptista Haddad
- Laboratório de Herpetologia Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP) Instituto de Biociências Universidade Estadual Paulista Rio Claro Brazil
| | - Clarissa Canedo
- Departamento de Zoologia Instituto de Biologia Roberto Alcantara Gomes Universidade do Estado do Rio de Janeiro Rio de Janeiro Brazil
- Setor de Herpetologia Departamento de Vertebrados Museu Nacional Universidade Federal do Rio de Janeiro Rio de Janeiro Brazil
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10
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Carvalho TR, Seger KR, Magalhães FM, Lourenço LB, Haddad CFB. Systematics and cryptic diversification of
Leptodactylus
frogs in the Brazilian campo rupestre. ZOOL SCR 2020. [DOI: 10.1111/zsc.12470] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Thiago R. Carvalho
- Laboratório de Herpetologia Departamento de Biodiversidade e Centro de Aquicultura Instituto de Biociências Universidade Estadual Paulista Rio Claro Brazil
| | - Karin R. Seger
- Laboratório de Estudos Cromossômicos Departamento de Biologia Estrutural e Funcional Instituto de Biologia Universidade Estadual de Campinas Campinas Brazil
| | - Felipe M. Magalhães
- Programa de Pós‐Graduação em Ciências Biológicas Centro de Ciências Exatas e da Natureza Universidade Federal da Paraíba João Pessoa Brazil
| | - Luciana B. Lourenço
- Laboratório de Estudos Cromossômicos Departamento de Biologia Estrutural e Funcional Instituto de Biologia Universidade Estadual de Campinas Campinas Brazil
| | - Célio F. B. Haddad
- Laboratório de Herpetologia Departamento de Biodiversidade e Centro de Aquicultura Instituto de Biociências Universidade Estadual Paulista Rio Claro Brazil
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11
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Targueta CP, Krylov V, Nondilo TE, Lima J, Lourenço LB. Sex chromosome evolution in frogs-helpful insights from chromosome painting in the genus Engystomops. Heredity (Edinb) 2020; 126:396-409. [PMID: 33184505 DOI: 10.1038/s41437-020-00385-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Revised: 10/27/2020] [Accepted: 10/28/2020] [Indexed: 12/29/2022] Open
Abstract
The differentiation of sex chromosomes is thought to be interrupted by relatively frequent sex chromosome turnover and/or occasional recombination between sex chromosomes (fountain-of-youth model) in some vertebrate groups as fishes, amphibians, and lizards. As a result, we observe the prevalence of homomorphic sex chromosomes in these groups. Here, we provide evidence for the loss of sex chromosome heteromorphism in the Amazonian frogs of the genus Engystomops, which harbors an intriguing history of sex chromosome evolution. In this species complex composed of two named species, two confirmed unnamed species, and up to three unconfirmed species, highly divergent karyotypes are present, and heteromorphic X and Y chromosomes were previously found in two species. We describe the karyotype of a lineage estimated to be the sister of all remaining Amazonian Engystomops (named Engystomops sp.) and perform chromosome painting techniques using one probe for the Y chromosome and one probe for the non-centromeric heterochromatic bands of the X chromosome of E. freibergi to compare three Engystomops karyotypes. The Y probe detected the Y chromosomes of E. freibergi and E. petersi and one homolog of chromosome pair 11 of Engystomops sp., suggesting their common evolutionary origin. The X probe showed no interspecific hybridization, revealing that X chromosome heterochromatin is strongly divergent among the studied species. In the light of the phylogenetic relationships, our data suggest that sex chromosome heteromorphism may have occurred early in the evolution of the Amazonian Engystomops and have been lost in two unnamed but confirmed candidate species.
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Affiliation(s)
- Cíntia P Targueta
- Department of Structural and Functional Biology, Institute of Biology, State University of Campinas, Campinas, São Paulo, 13083-863, Brazil.,Department of Genetics, Institute of Biology Science, Federal University of Goiás, Goiânia, 74960-000, Brazil
| | - Vladimir Krylov
- Faculty of Science, Department of Cell Biology, Charles University, Vinicna 7, Prague 2, 128 44, Czech Republic
| | - Tobias E Nondilo
- Department of Structural and Functional Biology, Institute of Biology, State University of Campinas, Campinas, São Paulo, 13083-863, Brazil
| | - Jucivaldo Lima
- Institute of Scientific and Technological Research of Amapá-IEPA, Nucleus of Biodiversity (NUBIO); Rodovia Juscelino Kubitschek, s/n, Distrito da Fazendinha, Macapá, Amapá, Brazil
| | - Luciana B Lourenço
- Department of Structural and Functional Biology, Institute of Biology, State University of Campinas, Campinas, São Paulo, 13083-863, Brazil.
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12
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Mângia S, Koroiva R, Santana DJ. A new tiny toad species of Amazophrynella (Anura: Bufonidae) from east of the Guiana Shield in Amazonia, Brazil. PeerJ 2020; 8:e9887. [PMID: 32999760 PMCID: PMC7505081 DOI: 10.7717/peerj.9887] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2020] [Accepted: 08/17/2020] [Indexed: 12/01/2022] Open
Abstract
The combination of different approaches has successfully delimited new species within many Neotropical species complexes traditionally classified as a single nominal organism. Recent studies have shown that the Amazonian endemic genus Amazophrynella, currently composed of 12 small-sized species, could harbor several additional species. Based on morphology and molecular data, we describe a new species of Amazophrynella from east of the Guiana Shield, in Pará state, Brazil. The new species is characterized by having one of the biggest size of the genus (SVL of males 16.0–17.8 mm and females 22.9–24.4 mm), presence of a large palmar tubercle (occupying 2/4 of the palmar surface), 5.6–8.1% uncorrected p-distance from its sister clade (including A. teko, A. sp.1, and A. manaos) for the 16S mitochondrial gene, and 8.8% for the COI. The new species described here represents a newly discovered lineage. Of the 12 Amazophrynella species currently recognized, two were describe in the last century (A. bokermanni and A. minuta) and the remaining species were recently discovered and described (in the last six years), which underscores the degree to which species richness of Amazophrynella is underestimated.
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Affiliation(s)
- Sarah Mângia
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil
| | - Ricardo Koroiva
- Departamento de Sistemática e Ecologia, Universidade Federal da Paraíba, João Pessoa, Paraíba, Brazil
| | - Diego José Santana
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil
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13
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Lopes CM, Baêta D, Valentini A, Lyra ML, Sabbag AF, Gasparini JL, Dejean T, Haddad CFB, Zamudio KR. Lost and found: Frogs in a biodiversity hotspot rediscovered with environmental DNA. Mol Ecol 2020; 30:3289-3298. [PMID: 32786119 DOI: 10.1111/mec.15594] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2020] [Revised: 07/25/2020] [Accepted: 08/05/2020] [Indexed: 12/31/2022]
Abstract
Declines and extinctions are increasing globally and challenge conservationists to keep pace with biodiversity monitoring. Organisms leave DNA traces in the environment, e.g., in soil, water, and air. These DNA traces are referred to as environmental DNA (eDNA). The analysis of eDNA is a highly sensitive method with the potential to rapidly assess local diversity and the status of threatened species. We searched for DNA traces of 30 target amphibian species of conservation concern, at different levels of threat, using an environmental DNA metabarcoding approach, together with an extensive sequence reference database to analyse water samples from six montane sites in the Atlantic Coastal Forest and adjacent Cerrado grasslands of Brazil. We successfully detected DNA traces of four declined species (Hylodes ornatus, Hylodes regius, Crossodactylus timbuhy, and Vitreorana eurygnatha); two locally disappeared (Phasmahyla exilis and Phasmahyla guttata); and one species that has not been seen since 1968 (putatively assigned to Megaelosia bocainensis). We confirm the presence of species undetected by traditional methods, underscoring the efficacy of eDNA metabarcoding for biodiversity monitoring at low population densities, especially in megadiverse tropical sites. Our results support the potential application of eDNA in conservation biology, to evaluate persistence and distribution of threatened species in surveyed habitats or sites, and improve accuracy of red lists, especially for species undetected over long periods.
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Affiliation(s)
- Carla Martins Lopes
- Departamento de Biodiversidade e Centro de Aquicultura, I.B., Universidade Estadual Paulista (UNESP), Rio Claro, SP, Brazil
| | - Délio Baêta
- Departamento de Biodiversidade e Centro de Aquicultura, I.B., Universidade Estadual Paulista (UNESP), Rio Claro, SP, Brazil
| | | | - Mariana Lúcio Lyra
- Departamento de Biodiversidade e Centro de Aquicultura, I.B., Universidade Estadual Paulista (UNESP), Rio Claro, SP, Brazil
| | - Ariadne Fares Sabbag
- Departamento de Biodiversidade e Centro de Aquicultura, I.B., Universidade Estadual Paulista (UNESP), Rio Claro, SP, Brazil
| | - João Luiz Gasparini
- Núcleo em Ecologia e Desenvolvimento Socioambiental de Macaé, Universidade Federal do Rio de Janeiro (UFRJ), Macaé, RJ, Brazil
| | | | - Célio Fernando Baptista Haddad
- Departamento de Biodiversidade e Centro de Aquicultura, I.B., Universidade Estadual Paulista (UNESP), Rio Claro, SP, Brazil
| | - Kelly Raquel Zamudio
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA
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14
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Santos MTT, Magalhães RF, Ferreira RB, Vittorazzi SE, Dias IR, Leite FSF, Lourenço LB, Santos FR, Haddad CFB, Garcia PCA. Systematic Revision of the Rare Bromeligenous Genus Crossodactylodes Cochran 1938 (Anura: Leptodactylidae: Paratelmatobiinae). HERPETOLOGICAL MONOGRAPHS 2020. [DOI: 10.1655/herpmonographs-d-19-00008.1] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Marcus Thadeu T. Santos
- Programa de Pós-graduação em Zoologia, Instituto de Biociências, Universidade Estadual Paulista (UNESP), Caixa Postal 199, 13506-900, Rio Claro, SP, Brazil
| | - Rafael F. Magalhães
- Programa de Pós-graduação em Zoologia, Instituto de Ciências Biológicas, Departamento de Zoologia, Universidade Federal de Minas Gerais, 31270-901, Belo Horizonte, MG, Brazil
| | - Rodrigo B. Ferreira
- Projeto Bromeligenous, Instituto Marcos Daniel, 29090-160, Vitória, ES, Brazil
| | - Stenio E. Vittorazzi
- Departamento de Ciências Biológicas, Universidade do Estado de Mato Grosso, 78300-000, Tangará da Serra, MT, Brazil
| | - Iuri R. Dias
- Departamento de Ciências Biológicas, Universidade Estadual de Santa Cruz, 45662-900, Ilhéus, BA, Brazil
| | - Felipe S. F. Leite
- Sagarana Lab, Instituto de Ciências Biológicas e da Saúde, Universidade Federal de Viçosa, Campus Florestal, 35690-000, Florestal, MG, Brazil
| | - Luciana B. Lourenço
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, 13083-863, Campinas, SP, Brazil
| | - Fabrício R. Santos
- Programa de Pós-graduação em Zoologia, Instituto de Ciências Biológicas, Departamento de Zoologia, Universidade Federal de Minas Gerais, 31270-901, Belo Horizonte, MG, Brazil
| | - Célio F. B. Haddad
- Programa de Pós-graduação em Zoologia, Instituto de Biociências, Universidade Estadual Paulista (UNESP), Caixa Postal 199, 13506-900, Rio Claro, SP, Brazil
| | - Paulo C. A. Garcia
- Programa de Pós-graduação em Zoologia, Instituto de Ciências Biológicas, Departamento de Zoologia, Universidade Federal de Minas Gerais, 31270-901, Belo Horizonte, MG, Brazil
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15
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Cai YT, Li Q, Zhang JY, Storey KB, Yu DN. Characterization of the mitochondrial genomes of two toads, Anaxyrus americanus (Anura: Bufonidae) and Bufotes pewzowi (Anura: Bufonidae), with phylogenetic and selection pressure analyses. PeerJ 2020; 8:e8901. [PMID: 32328346 PMCID: PMC7164433 DOI: 10.7717/peerj.8901] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2019] [Accepted: 03/12/2020] [Indexed: 12/31/2022] Open
Abstract
Mitogenomes are useful in analyzing phylogenetic relationships and also appear to influence energy metabolism, thermoregulation and osmoregulation. Much evidence has accumulated for positive selection acting on mitochondrial genes associated with environmental adaptation. Hence, the mitogenome is a likely target for environmental selection. The family Bufonidae (true toads) has only nine complete and four partial mitogenomes published compared to the 610 known species of this family. More mitogenomes are needed in order to obtain a clearer understanding of the phylogenetic relationships within Bufonidae that are currently controversial. To date, no mitogenomes have been reported from the genera Anaxyrus and Bufotes. Anaxyrus americanus can live in low temperature environments and Bufotes pewzowi can live in high salinity environments. We sequenced the mitogenomes of these two species to discuss the phylogenetic relationships within Bufonidae and the selection pressures experienced by specimens living in low temperature or saline environments. Like other toads, the circular mitogenomes of both species contained the typical 37 genes. Anaxyrus americanus had the highest A+T content of the complete mitogenome among the Bufonidae. In addition, A. americanus showed a negative AT-skew in the control region, whereas Bufotes pewzowi showed a positive AT-skew. Additionally, both toad species had unique molecular features in common: an ND1 gene that uses TTG as the start codon, an extra unpaired adenine (A) in the anticodon arm of trnS (AGY), and the loss of the DHU loop in trnC. The monophyly of Bufonidae was corroborated by both BI and ML trees. An analysis of selective pressure based on the 13 protein coding genes was conducted using the EasyCodeML program. In the branch model analysis, we found two branches of A. americanus and Bufotes pewzowi that were under negative selection. Additionally, we found two positively selected sites (at positions 115 and 119, BEB value > 0.90) in the ND6 protein in the site model analysis. The residue D (119) was located only in A. americanus and may be related to adaptive evolution in low temperature environments. However, there was no evidence of a positively selected site in Bufotes pewzowi in this study.
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Affiliation(s)
- Yu-Ting Cai
- College of Chemistry and Life Science, Zhejiang Normal University, Jinhua, Zhejiang Province, China
| | - Qin Li
- College of Chemistry and Life Science, Zhejiang Normal University, Jinhua, Zhejiang Province, China
| | - Jia-Yong Zhang
- Key Lab of Wildlife Biotechnology, Conservation and Utilization of Zhejiang Province, Zhejiang Normal University, Jinhua, Zhejiang, China
| | | | - Dan-Na Yu
- Key Lab of Wildlife Biotechnology, Conservation and Utilization of Zhejiang Province, Zhejiang Normal University, Jinhua, Zhejiang, China
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16
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Bezerra AM, Passos LO, de Luna-Dias C, Quintanilha AS, de Carvalho-e-Silva SP. A Missing Piece of the Puzzle: Re-Encounter of Aplastodiscus musicus, its Call, and Phylogenetic Placement (Anura: Hylidae: Cophomantini). HERPETOLOGICA 2020. [DOI: 10.1655/herpetologica-d-18-00061] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Andressa M. Bezerra
- Laboratório de Anfíbios e Répteis, Departamento de Zoologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), RJ 21944-902, Brazil
| | - Lucas O. Passos
- Laboratório de Anfíbios e Répteis, Departamento de Zoologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), RJ 21944-902, Brazil
| | - Cyro de Luna-Dias
- Laboratório de Anfíbios e Répteis, Departamento de Zoologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), RJ 21944-902, Brazil
| | - Amanda S. Quintanilha
- Laboratório de Anfíbios e Répteis, Departamento de Zoologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), RJ 21944-902, Brazil
| | - Sergio P. de Carvalho-e-Silva
- Laboratório de Anfíbios e Répteis, Departamento de Zoologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), RJ 21944-902, Brazil
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17
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Nascimento J, Lima JD, Suárez P, Baldo D, Andrade GV, Pierson TW, Fitzpatrick BM, Haddad CFB, Recco-Pimentel SM, Lourenço LB. Extensive Cryptic Diversity Within the Physalaemus cuvieri- Physalaemus ephippifer Species Complex (Amphibia, Anura) Revealed by Cytogenetic, Mitochondrial, and Genomic Markers. Front Genet 2019; 10:719. [PMID: 31475033 PMCID: PMC6702337 DOI: 10.3389/fgene.2019.00719] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2018] [Accepted: 07/09/2019] [Indexed: 01/03/2023] Open
Abstract
Previous cytogenetic and phylogenetic analyses showed a high variability in the frog taxa Physalaemus cuvieri and Physalaemus ephippifer and suggested the presence of undescribed diversity in this species complex. Here, by 1) adding specimens from the Brazilian Amazon region, 2) employing sequence-based species delimitation approaches, and 3) including RADseq-style markers, we demonstrate that the diversity in the P. cuvieri-P. ephippifer species complex is even greater than previously suspected. Specimens from Viruá and Western Pará, located at the Guiana Amazonian area of endemism, were recovered as distinct from all previously identified lineages by the phylogenetic analyses based on mitochondrial DNA and RAD markers, a PCA from RAD data, and cytogenetic analysis. The sequence-based species delimitation analyses supported the recognition of one or two undescribed species among these Amazonian specimens and also supported the recognition of at least three other species in the P. cuvieri-P. ephippifer species complex. These new results reinforce the need for a comprehensive taxonomic revision.
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Affiliation(s)
- Juliana Nascimento
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo, Brazil
| | - Jucivaldo D. Lima
- Núcleo de Biodiversidade (NUBIO), Instituto de Pesquisas Científicas e Tecnológicas do Estado do Amapá, Zoologia, Campus da Fazendinha, Macapá, Brazil
| | - Pablo Suárez
- Instituto de Biología Subtropical (CONICET-UNaM), Puerto Iguazú, Argentina
| | - Diego Baldo
- Laboratorio de Genética Evolutiva, Instituto de Biología Subtropical (CONICET-UNaM), Facultad de Ciencias Exactas, Químicas y Naturales, Universidad Nacional de Misiones, Posadas, Argentina
| | - Gilda V. Andrade
- Departamento de Biologia, Centro de Ciências Biológicas e da Saúde, Universidade Federal do Maranhão-UFMA, São Luís, Brazil
| | - Todd W. Pierson
- Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, TN, United States
| | - Benjamin M. Fitzpatrick
- Department of Ecology & Evolutionary Biology, University of Tennessee, Knoxville, TN, United States
| | - Célio F. B. Haddad
- Departamento de Zoologia and Centro de Aquicultura (CAUNESP), Instituto de Biociências, Universidade Estadual Paulista, São Paulo, Brazil
| | - Shirlei M. Recco-Pimentel
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo, Brazil
| | - Luciana Bolsoni Lourenço
- Laboratório de Estudos Cromossômicos (LabEsC), Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo, Brazil
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18
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Gatto KP, Seger KR, Garcia PCDA, Lourenço LB. Satellite DNA Mapping in Pseudis fusca (Hylidae, Pseudinae) Provides New Insights into Sex Chromosome Evolution in Paradoxical Frogs. Genes (Basel) 2019; 10:E160. [PMID: 30791490 PMCID: PMC6410007 DOI: 10.3390/genes10020160] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2018] [Revised: 01/31/2019] [Accepted: 02/08/2019] [Indexed: 12/29/2022] Open
Abstract
In the frog genus Pseudis, previous works found a sex-linked heteromorphism of the PcP190 satellite DNA in the nucleolus organizer region (NOR)-bearing chromosome pairs of Pseudis bolbodactyla and Pseudis tocantins, which possess a ZZ/ZW sex determination system. A pericentromeric inversion was inferred to have occurred during W chromosome evolution, moving a chromosomal cluster enriched by the PcP190 from the short arm (as observed in P. bolbodactyla) to the NOR-bearing long arm (as observed in P. tocantins). However, whether such an inversion happened in P. tocantins or in the common ancestor of Pseudis fusca and P. tocantins remained unclear. To assess this question, we mapped PcP190 in the karyotype of P. fusca from three distinct localities. Southern blotting was used to compare males and females. The mitochondrial H1 fragment (which contains the 12S ribosomal RNA (rRNA), tRNAval, and 16S rRNA genes) and cytochrome b gene were partially sequenced, and a species tree was inferred to guide our analysis. Pseudis fusca specimens were placed together as the sister group of P. tocantins, but based on genetic distance, one of the analyzed populations is probably an undescribed species. A cluster of PcP190, located in the long arm of chromosome 7, is sex linked in this putative new species but not in the remaining P. fusca. We could infer that the pericentromeric inversion that moved the PcP190 site to the NOR-bearing chromosome arm (long arm) occurred in the common ancestor of P. fusca, the putative undescribed species, and P. tocantins.
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Affiliation(s)
- Kaleb Pretto Gatto
- Laboratory of Chromosome Studies, Department of Structural and Functional Biology, Institute of Biology, University of Campinas, Campinas 13083-863, SP, Brazil.
| | - Karin Regina Seger
- Laboratory of Chromosome Studies, Department of Structural and Functional Biology, Institute of Biology, University of Campinas, Campinas 13083-863, SP, Brazil.
| | | | - Luciana Bolsoni Lourenço
- Laboratory of Chromosome Studies, Department of Structural and Functional Biology, Institute of Biology, University of Campinas, Campinas 13083-863, SP, Brazil.
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Walker M, Wachlevski M, Nogueira-Costa P, Garcia PC, Haddad CF. A New Species ofFritzianaMello-Leitão 1937 (Amphibia: Anura: Hemiphractidae) from the Atlantic Forest, Brazil. HERPETOLOGICA 2018. [DOI: 10.1655/herpetologica-d-17-00068.1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Marina Walker
- Universidade Estadual Paulista, Instituto de Biociências, Programa de Pós-Graduação em Ciências Biológicas, Avenida 24 A,1515, Bela Vista, 13506-900, Rio Claro, SP, Brazil
| | - Milena Wachlevski
- Universidade Federal Rural do Semi-Árido, Centro de Ciências Biológicas e da Saúde, Laboratório de Ecologia e Comportamento Animal, Avenida Francisco Mota, 572, 59625-900, Mossoró, RN, Brazil
| | - Paulo Nogueira-Costa
- Universidade Federal do Sul e Sudeste do Pará, Instituto de Estudos em Saúde e Biológicas, Faculdade de Ciências da Saúde e Biológicas, Folha, 31, Quadra, 07, Lote Especial, Nova Marabá, 68507-590, Marabá, PA, Brazil
- Universidade Federal do Rio de Janeiro, Museu Nacional, Departamento de Vertebrados, Quinta da Boa Vista, s/n, 20940-040, Rio de Janeiro, RJ, Brazil
| | - Paulo C.A. Garcia
- Universidade Federal de Minas Gerais, Programa de Pós-Graduação em Zoologia, Departamento de Zoologia, Instituto de Ciências Biológicas, Av. Antônio Carlos, 6627, Pampulha, 31270-901, Belo Horizonte, MG, Brazil
| | - Célio F.B. Haddad
- Universidade Estadual Paulista, Instituto de Biociências, Programa de Pós-Graduação em Ciências Biológicas, Avenida 24 A,1515, Bela Vista, 13506-900, Rio Claro, SP, Brazil
- Universidade Estadual Paulista, Instituto de Biociências, Departamento de Zoologia and Centro de Aquicultura (CAUNESP), Avenida 24 A,1515, Bela Vista, 13506-900, Rio Claro, SP, Brazil
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20
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Taucce PP, Canedo C, Haddad CF. Two New Species ofIschnocnema(Anura: Brachycephalidae) from Southeastern Brazil and their Phylogenetic Position within theI. guentheriSeries. HERPETOLOGICAL MONOGRAPHS 2018. [DOI: 10.1655/herpmonographs-d-16-00014.1] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Pedro P.G. Taucce
- Instituto de Biociências, Universidade Estadual Paulista, Câmpus Rio Claro, Departamento de Zoologia e Centro de Aquicultura (CAUNESP), Laboratório de Herpetologia, Cx. Postal 199, 13506-900, Rio Claro, São Paulo, Brazil
| | - Clarissa Canedo
- Instituto de Biologia Roberto Alcântara Gomes, Universidade do Estado do Rio de Janeiro, Departamento de Zoologia, Rua São Francisco Xavier, 524, Maracanã, 20550-013, Rio de Janeiro, Rio de Janeiro, Brazil
- Museu Nacional, Universidade Federal do Rio de Janeiro, Departamento de Vertebrados, Setor de Herpetologia, Quinta da Boa Vista, 20940-040, Rio de Janeiro, Rio de Janeiro, Brazil
| | - Célio F.B. Haddad
- Instituto de Biociências, Universidade Estadual Paulista, Câmpus Rio Claro, Departamento de Zoologia e Centro de Aquicultura (CAUNESP), Laboratório de Herpetologia, Cx. Postal 199, 13506-900, Rio Claro, São Paulo, Brazil
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21
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Dória TAF, Canedo CC, Napoli MF. Processes Influencing Anuran Coexistence on a Local Scale: A Phylogenetic and Ecological Analysis in a Restinga Environment. SOUTH AMERICAN JOURNAL OF HERPETOLOGY 2018. [DOI: 10.2994/sajh-d-17-00044.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Affiliation(s)
- Thaís Andrade Ferreira Dória
- Programa de Pós-Graduação em Ecologia e Biomonitoramento, Instituto de Biologia, Universidade Federal da Bahia, Rua Barão de Jeremoabo, Campus Universitário de Ondina, CEP 40170-115, Salvador, Bahia, Brazil
| | - Clarissa Coimbra Canedo
- Departamento de Vertebrados, Museu Nacional, Universidade Federal do Rio de Janeiro, Quinta da Boa Vista, CEP 20940-040, Rio de Janeiro, Rio de Janeiro, Brazil
| | - Marcelo Felgueiras Napoli
- Programa de Pós-Graduação em Ecologia e Biomonitoramento, Instituto de Biologia, Universidade Federal da Bahia, Rua Barão de Jeremoabo, Campus Universitário de Ondina, CEP 40170-115, Salvador, Bahia, Brazil
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22
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Phylogenetic relationships and cryptic species diversity in the Brazilian egg-brooding tree frog, genus Fritziana Mello-Leitão 1937 (Anura: Hemiphractidae). Mol Phylogenet Evol 2018; 123:59-72. [DOI: 10.1016/j.ympev.2018.02.012] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2017] [Revised: 02/11/2018] [Accepted: 02/11/2018] [Indexed: 11/23/2022]
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23
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Lopes CM, Sasso T, Valentini A, Dejean T, Martins M, Zamudio KR, Haddad CFB. eDNA metabarcoding: a promising method for anuran surveys in highly diverse tropical forests. Mol Ecol Resour 2017; 17:904-914. [DOI: 10.1111/1755-0998.12643] [Citation(s) in RCA: 54] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2016] [Revised: 11/19/2016] [Accepted: 12/06/2016] [Indexed: 12/12/2022]
Affiliation(s)
- Carla M. Lopes
- Departamento de Zoologia; Instituto de Biociências; Universidade Estadual Paulista “Júlio de Mesquita Filho”; Av. 24A n. 1515 Rio Claro SP 13506-900 Brazil
| | - Thais Sasso
- Departamento de Ecologia; Instituto de Biociências; Universidade de São Paulo; São Paulo SP 05508-090 Brazil
| | - Alice Valentini
- SPYGEN; Savoie Technolac; BP 274 Le Bourget-du-Lac 73375 France
| | - Tony Dejean
- SPYGEN; Savoie Technolac; BP 274 Le Bourget-du-Lac 73375 France
| | - Marcio Martins
- Departamento de Ecologia; Instituto de Biociências; Universidade de São Paulo; São Paulo SP 05508-090 Brazil
| | - Kelly R. Zamudio
- Department of Ecology and Evolutionary Biology; Cornell University; Ithaca NY 14853 USA
| | - Célio F. B. Haddad
- Departamento de Zoologia; Instituto de Biociências; Universidade Estadual Paulista “Júlio de Mesquita Filho”; Av. 24A n. 1515 Rio Claro SP 13506-900 Brazil
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24
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Grismer LL, Wood PL, Aowphol A, Cota M, Grismer MS, Murdoch ML, Aguilar C, Grismer JL. Out of Borneo, again and again: biogeography of the Stream Toad genusAnsoniaStoliczka (Anura: Bufonidae) and the discovery of the first limestone cave-dwelling species. Biol J Linn Soc Lond 2016. [DOI: 10.1111/bij.12886] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- L. Lee Grismer
- Herpetology Laboratory; Department of Biology; La Sierra University; 4500 Riverwalk Parkway Riverside CA 92515 USA
| | - Perry L. Wood
- Department of Biology; Brigham Young University; 150 East Bulldog Boulevard Provo UT 84602 USA
| | - Anchalee Aowphol
- Department of Zoology; Faculty of Science; Kasetsart University; Bangkok 10900 Thailand
| | - Michael Cota
- Natural History Museum; National Science Museum, Thailand; Technopolis Khlong 5 Khlong Luang Pathum Thani 12120 Thailand
| | - Marta S. Grismer
- Herpetology Laboratory; Department of Biology; La Sierra University; 4500 Riverwalk Parkway Riverside CA 92515 USA
| | - Matthew L. Murdoch
- Herpetology Laboratory; Department of Biology; La Sierra University; 4500 Riverwalk Parkway Riverside CA 92515 USA
| | - Cesar Aguilar
- Department of Biology; Brigham Young University; 150 East Bulldog Boulevard Provo UT 84602 USA
| | - Jesse L. Grismer
- Department of Biological Sciences; Auburn University; 331 Funchess Hall Auburn AL 36849 USA
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Liedtke HC, Müller H, Rödel MO, Menegon M, Gonwouo LN, Barej MF, Gvoždík V, Schmitz A, Channing A, Nagel P, Loader SP. No ecological opportunity signal on a continental scale? Diversification and life-history evolution of African true toads (Anura: Bufonidae). Evolution 2016; 70:1717-33. [DOI: 10.1111/evo.12985] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2015] [Revised: 05/11/2016] [Accepted: 06/03/2016] [Indexed: 02/06/2023]
Affiliation(s)
- H. Christoph Liedtke
- Department of Environmental Science (Biogeography); University of Basel; 4056 Basel Switzerland
- Ecology, Evolution and Developmental Group, Department of Wetland Ecology; Estación Biológica de Doñana (CSIC); 41092 Sevilla Spain
| | - Hendrik Müller
- Institut für Spezielle Zoologie und Evolutionsbiologie mit Phyletischem Museum; Friedrich-Schiller-Universität Jena; 07743 Jena Germany
| | - Mark-Oliver Rödel
- Museum für Naturkunde Berlin; Leibniz Institute for Evolution and Biodiversity Science; 10115 Berlin Germany
| | - Michele Menegon
- Tropical Biodiversity Section; MUSE-Museo delle Scienze; Trento 38123 Italy
| | - LeGrand Nono Gonwouo
- Cameroon Herpetology-Conservation Biology Foundation; P.O. Box 8218 Yaoundé Cameroon
| | - Michael F. Barej
- Museum für Naturkunde Berlin; Leibniz Institute for Evolution and Biodiversity Science; 10115 Berlin Germany
| | - Václav Gvoždík
- Institute of Vertebrate Biology; Czech Academy of Sciences; Brno Czech Republic
| | - Andreas Schmitz
- Natural History Museum of Geneva; Department of Herpetology and Ichthyology; C.P. 6434 1211 Geneva 6 Switzerland
| | - Alan Channing
- Biodiversity and Conservation Biology Department; University of the Western Cape; Bellville 7535 South Africa
| | - Peter Nagel
- Department of Environmental Science (Biogeography); University of Basel; 4056 Basel Switzerland
| | - Simon P. Loader
- Department of Environmental Science (Biogeography); University of Basel; 4056 Basel Switzerland
- Department of Life Sciences; University of Roehampton; London SW15 4JD United Kingdom
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Phylogeny of frogs from the genus Physalaemus (Anura, Leptodactylidae) inferred from mitochondrial and nuclear gene sequences. Mol Phylogenet Evol 2015; 92:204-16. [DOI: 10.1016/j.ympev.2015.06.011] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Revised: 06/16/2015] [Accepted: 06/17/2015] [Indexed: 11/24/2022]
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Drift rather than selection dominates MHC class II allelic diversity patterns at the biogeographical range scale in natterjack toads Bufo calamita. PLoS One 2014; 9:e100176. [PMID: 24937211 PMCID: PMC4061088 DOI: 10.1371/journal.pone.0100176] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2013] [Accepted: 05/23/2014] [Indexed: 12/31/2022] Open
Abstract
Study of major histocompatibility complex (MHC) loci has gained great popularity in recent years, partly due to their function in protecting vertebrates from infections. This is of particular interest in amphibians on account of major threats many species face from emergent diseases such as chytridiomycosis. In this study we compare levels of diversity in an expressed MHC class II locus with neutral genetic diversity at microsatellite loci in natterjack toad (Bufo (Epidalea) calamita) populations across the whole of the species' biogeographical range. Variation at both classes of loci was high in the glacial refugium areas (REF) and much lower in postglacial expansion areas (PGE), especially in range edge populations. Although there was clear evidence that the MHC locus was influenced by positive selection in the past, congruence with the neutral markers suggested that historical demographic events were the main force shaping MHC variation in the PGE area. Both neutral and adaptive genetic variation declined with distance from glacial refugia. Nevertheless, there were also some indications from differential isolation by distance and allele abundance patterns that weak effects of selection have been superimposed on the main drift effect in the PGE zone.
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Veiga-Menoncello ACP, Lourenço LB, Strüssmann C, Rossa-Feres DC, Andrade GV, Giaretta AA, Recco-Pimentel SM. A phylogenetic analysis ofPseudopaludicola(Anura) providing evidence of progressive chromosome reduction. ZOOL SCR 2014. [DOI: 10.1111/zsc.12048] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Ana C. P. Veiga-Menoncello
- Departamento de Biologia Estrutural e Funcional; Instituto de Biologia; Universidade Estadual de Campinas (UNICAMP); Campinas SP 13083-863 Brazil
| | - Luciana B. Lourenço
- Departamento de Biologia Estrutural e Funcional; Instituto de Biologia; Universidade Estadual de Campinas (UNICAMP); Campinas SP 13083-863 Brazil
| | - Christine Strüssmann
- Departamento de Ciências Básicas e Produção Animal; Faculdade de Agronomia; Medicina Veterinária e Zootecnia; Universidade Federal de Mato Grosso (UFMT); Cuiabá MT 78060-900 Brazil
| | - Denise C. Rossa-Feres
- Departamento de Zoologia e Botânica; Instituto de Biociências Letras e Ciências Exatas; Universidade Estadual Paulista (UNESP); São José do Rio Preto SP 15054-000 Brazil
| | - Gilda V. Andrade
- Departamento de Biologia; Centro de Ciências Biológicas e da Saúde; Universidade Federal do Maranhão (UFMA); São Luis MA 65085-580 Brazil
| | - Ariovaldo A. Giaretta
- Faculdade de Ciências Integradas do Pontal; Universidade Federal de Uberlândia (UFU); Ituiutaba MG 384302-000 Brazil
| | - Shirlei M. Recco-Pimentel
- Departamento de Biologia Estrutural e Funcional; Instituto de Biologia; Universidade Estadual de Campinas (UNICAMP); Campinas SP 13083-863 Brazil
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29
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Diedericks G, Daniels SR. Ain’t no mountain high enough, ain’t no valley low enough? Phylogeography of the rupicolous Cape girdled lizard (Cordylus cordylus) reveals a generalist pattern. Mol Phylogenet Evol 2014; 71:234-48. [DOI: 10.1016/j.ympev.2013.10.015] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Revised: 10/11/2013] [Accepted: 10/18/2013] [Indexed: 10/26/2022]
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30
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Medeiros LR, Lourenço LB, Rossa-Feres DC, Lima AP, Andrade GV, Giaretta AA, Egito GTBT, Recco-Pimentel SM. Comparative cytogenetic analysis of some species of the Dendropsophus microcephalus group (Anura, Hylidae) in the light of phylogenetic inferences. BMC Genet 2013; 14:59. [PMID: 23822759 PMCID: PMC3710474 DOI: 10.1186/1471-2156-14-59] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2013] [Accepted: 06/20/2013] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Dendropsophus is a monophyletic anuran genus with a diploid number of 30 chromosomes as an important synapomorphy. However, the internal phylogenetic relationships of this genus are poorly understood. Interestingly, an intriguing interspecific variation in the telocentric chromosome number has been useful in species identification. To address certain uncertainties related to one of the species groups of Dendropsophus, the D. microcephalus group, we carried out a cytogenetic analysis combined with phylogenetic inferences based on mitochondrial sequences, which aimed to aid in the analysis of chromosomal characters. Populations of Dendropsophus nanus, Dendropsophus walfordi, Dendropsophus sanborni, Dendropsophus jimi and Dendropsophus elianeae, ranging from the extreme south to the north of Brazil, were cytogenetically compared. A mitochondrial region of the ribosomal 12S gene from these populations, as well as from 30 other species of Dendropsophus, was used for the phylogenetic inferences. Phylogenetic relationships were inferred using maximum parsimony and Bayesian analyses. RESULTS The species D. nanus and D. walfordi exhibited identical karyotypes (2n = 30; FN = 52), with four pairs of telocentric chromosomes and a NOR located on metacentric chromosome pair 13. In all of the phylogenetic hypotheses, the paraphyly of D. nanus and D. walfordi was inferred. D. sanborni from Botucatu-SP and Torres-RS showed the same karyotype as D. jimi, with 5 pairs of telocentric chromosomes (2n = 30; FN = 50) and a terminal NOR in the long arm of the telocentric chromosome pair 12. Despite their karyotypic similarity, these species were not found to compose a monophyletic group. Finally, the phylogenetic and cytogenetic analyses did not cluster the specimens of D. elianeae according to their geographical occurrence or recognized morphotypes. CONCLUSIONS We suggest that a taxonomic revision of the taxa D. nanus and D. walfordi is quite necessary. We also observe that the number of telocentric chromosomes is useful to distinguish among valid species in some cases, although it is unchanged in species that are not necessarily closely related phylogenetically. Therefore, inferences based on this chromosomal character must be made with caution; a proper evolutionary analysis of the karyotypic variation in Dendropsophus depends on further characterization of the telocentric chromosomes found in this group.
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Affiliation(s)
- Lilian Ricco Medeiros
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), 13086-863, Campinas, SP, Brazil
| | - Luciana Bolsoni Lourenço
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), 13086-863, Campinas, SP, Brazil
| | - Denise Cerqueira Rossa-Feres
- Departamento de Zoologia e Botânica, Instituto de Biociências, Letras e Ciências Exatas, Universidade Estadual Paulista (UNESP), 15054-000, São José do Rio Preto, São Paulo, Brazil
| | - Albertina Pimentel Lima
- Coordenadoria de Pesquisas em Ecologia, Instituto Nacional de Pesquisas da Amazônia (INPA), 69011-970, Manaus, AM, Brazil
| | - Gilda Vasconcellos Andrade
- Departamento de Biologia, Centro de Ciências Biológicas e da Saúde, Universidade Federal do Maranhão (UFMA), Campus do Bacanga, 65080-040, São Luís, MA, Brazil
| | - Ariovaldo Antonio Giaretta
- Laboratório de Anuros Neotropicais, Faculdade de Ciências Integradas do Pontal, Universidade Federal de Uberlândia, 38304-402, Ituiutaba, MG, Brazil
| | - Gabriel Toselli Barbosa Tabosa Egito
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), 13086-863, Campinas, SP, Brazil
- Departamento de Polícia Federal, Ministério da Justiça, 68908-901, Macapá, AP, Brazil
| | - Shirlei Maria Recco-Pimentel
- Departamento de Biologia Estrutural e Funcional, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), 13086-863, Campinas, SP, Brazil
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Species limits in the Andean toad genus Osornophryne (Bufonidae). Mol Phylogenet Evol 2012; 65:805-22. [DOI: 10.1016/j.ympev.2012.08.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2011] [Revised: 08/01/2012] [Accepted: 08/02/2012] [Indexed: 11/19/2022]
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32
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Canedo C, Haddad CF. Phylogenetic relationships within anuran clade Terrarana, with emphasis on the placement of Brazilian Atlantic rainforest frogs genus Ischnocnema (Anura: Brachycephalidae). Mol Phylogenet Evol 2012; 65:610-20. [DOI: 10.1016/j.ympev.2012.07.016] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2012] [Revised: 07/14/2012] [Accepted: 07/16/2012] [Indexed: 11/25/2022]
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33
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Peloso PL, Faivovich J, Grant T, Gasparini JL, Haddad CF. An Extraordinary New Species ofMelanophryniscus(Anura, Bufonidae) from Southeastern Brazil. AMERICAN MUSEUM NOVITATES 2012. [DOI: 10.1206/3762.2] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Pansook A, Khonsue W, Piyapattanakorn S, Pariyanonth P. Phylogenetic relationships among Hoplobatrachus rugulosus in Thailand as inferred from mitochondrial DNA sequences of the cytochrome-b gene (Amphibia, Anura, Dicroglossidae). Zoolog Sci 2012; 29:54-9. [PMID: 22233497 DOI: 10.2108/zsj.29.54] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
A fragment (564 bp) of the mitochondrial cytochrome-b (Cyt-b) gene was studied for 73 individual rice field frogs (Hoplobatrachus rugulosus) from 18 geographical locations (populations) within Thailand. Sequence analysis revealed the presence of 12 haplotypes, with five haplotypes being represented in two or more populations, and the other seven being population-distinct haplotypes. Phylogenetic analysis by maximum parsimony, maximum likelihood, and neighbor joining analyses all placed the 12 haplotypes into two distinct and well-separated clades with high bootstrap support, reflecting the high sequence divergences between the clades (25.3-32.3%). The mountain ranges and the Isthmus of Kra are likely to have played important roles in hindering gene flow among H. rugulosus populations in Thailand. From the sequence divergence values, the two clades of H. rugulosus can be classified into two distinct species, and therefore, the strains of H. rugulosus bred in farm stocks should be restricted to a population of one clade so as to avoid cross breeding between the two clades.
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Affiliation(s)
- Anusorn Pansook
- Biological Sciences Program, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
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Páez-Moscoso DJ, Guayasamin JM, Yánez-Muñoz M. A new species of Andean toad (Bufonidae, Osornophryne) discovered using molecular and morphological data, with a taxonomic key for the genus. Zookeys 2011; 108:73-97. [PMID: 21852930 PMCID: PMC3119318 DOI: 10.3897/zookeys.108.1129] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2011] [Accepted: 05/05/2011] [Indexed: 11/12/2022] Open
Abstract
Combining a molecular phylogeny and morphological data, we discovered a new species of Osornophryne from the Amazonian slope of the Ecuadorian Andes. Morphologically, the new taxon is distinguished from all others species in Osornophryne by having the Toes IV and V longer than Toes I-III, a short and rounded snout with a small rostral papilla, and conical pustules on flanks. The new species previously was confused with Osornophryne guacamayo. A taxonomic key is provided for all known species of Osornophryne.
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Affiliation(s)
- Diego J. Páez-Moscoso
- Museo de Zoología, Escuela de Ciencias Biológicas, Pontificia Universidad Católica del Ecuador, Av. 12 de Octubre y Roca, Aptdo. 17012184, Quito, Ecuador
| | - Juan M. Guayasamin
- Centro de Investigación de la Biodiversidad y el Cambio Climático, Universidad Tecnológica Indoamérica, Av. Machala y Sabanilla, Quito, Ecuador
| | - Mario Yánez-Muñoz
- Museo de Zoología, Escuela de Ciencias Biológicas, Pontificia Universidad Católica del Ecuador, Av. 12 de Octubre y Roca, Aptdo. 17012184, Quito, Ecuador
- División de Herpetología, Museo Ecuatoriano de Ciencias Naturales, Rumipamba 341 y Av. de los Shyris. Quito, Ecuador
- Programa de Maestría en Biología de la Conservación, Pontificia Universidad Católica del Ecuador. Av. 12 de Octubre y Roca, Aptdo. 17012184, Quito, Ecuador
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A New Species of Toad of the Genus Incilius from the Sierra Madre Occidental of Chihuahua, Mexico (Anura: Bufonidae). J HERPETOL 2011. [DOI: 10.1670/10-093.1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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37
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LÖTTERS STEFAN, VAN DER MEIJDEN ARIE, COLOMA LUISA, BOISTEL RENAUD, CLOETENS PETER, ERNST RAFFAEL, LEHR EDGAR, VEITH MICHAEL. Assessing the molecular phylogeny of a near extinct group of vertebrates: the Neotropical harlequin frogs (Bufonidae;Atelopus). SYST BIODIVERS 2011. [DOI: 10.1080/14772000.2011.557403] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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38
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Cunningham M, Cherry MI. Mitochondrial DNA divergence in southern African bufonids: are species equivalent entities? AFR J HERPETOL 2010. [DOI: 10.1080/21564574.2000.9650012] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Michael Cunningham
- a Department of Zoology , Stellenbosch University , Private Bag XI, Matieland, 7601, South Africa E-mail:
| | - Michael I. Cherry
- a Department of Zoology , Stellenbosch University , Private Bag XI, Matieland, 7601, South Africa E-mail:
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Vasconcelos R, Froufe E, Brito J, Carranza S, Harris D. Phylogeography of the African Common Toad,Amietophrynus regularis, Based on Mitochondrial DNA Sequences: Inferences Regarding the Cape Verde Population and Biogeographical Patterns. AFRICAN ZOOLOGY 2010. [DOI: 10.3377/004.045.0207] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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40
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Matsui M, Tominaga A, Liu W, Khonsue W, Grismer LL, Diesmos AC, Das I, Sudin A, Yambun P, Yong H, Sukumaran J, Brown RM. Phylogenetic relationships of Ansonia from Southeast Asia inferred from mitochondrial DNA sequences: Systematic and biogeographic implications (Anura: Bufonidae). Mol Phylogenet Evol 2010; 54:561-70. [DOI: 10.1016/j.ympev.2009.08.003] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2009] [Revised: 07/28/2009] [Accepted: 08/03/2009] [Indexed: 10/20/2022]
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41
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Toad radiation reveals into-India dispersal as a source of endemism in the Western Ghats-Sri Lanka biodiversity hotspot. BMC Evol Biol 2009; 9:131. [PMID: 19519901 PMCID: PMC2706228 DOI: 10.1186/1471-2148-9-131] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2008] [Accepted: 06/11/2009] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND High taxonomic level endemism in the Western Ghats-Sri Lanka biodiversity hotspot has been typically attributed to the subcontinent's geological history of long-term isolation. Subsequent out of -- and into India dispersal of species after accretion to the Eurasian mainland is therefore often seen as a biogeographic factor that 'diluted' the composition of previously isolated Indian biota. However, few molecular studies have focussed on into-India dispersal as a possible source of endemism on the subcontinent. Using c. 6000 base pairs of mitochondrial and nuclear DNA, we investigated the evolutionary history and biogeography of true toads (Bufonidae), a group that colonized the Indian Subcontinent after the Indo-Asia collision. RESULTS Contrary to previous studies, Old World toads were recovered as a nested clade within New World Bufonidae, indicating a single colonization event. Species currently classified as Ansonia and Pedostibes were both recovered as being non-monophyletic, providing evidence for the independent origin of torrential and arboreal ecomorphs on the Indian subcontinent and in South-East Asia. Our analyses also revealed a previously unrecognized adaptive radiation of toads containing a variety of larval and adult ecomorphs. Molecular dating estimates and biogeographic analyses indicate that the early diversification of this clade happened in the Western Ghats and Sri Lanka during the Late Oligocene to Early Miocene. CONCLUSION Paleoclimate reconstructions have shown that the Early Neogene of India was marked by major environmental changes, with the transition from a zonal- to the current monsoon-dominated climate. After arrival in the Western Ghats-Sri Lanka hotspot, toads diversified in situ, with only one lineage able to successfully disperse out of these mountains. Consequently, higher taxonomic level endemism on the Indian Subcontinent is not only the result of Cretaceous isolation, but also of invasion, isolation and radiation of new elements after accretion to the Eurasian mainland.
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Frost DR, McDiarmid RW, Mendelson JR. Response to the Point of View of Gregory b. Pauly, David m. Hillis, and David c. Cannatella, by the Anuran Subcommittee of the Ssar/hl/asih Scientific and Standard English Names List. HERPETOLOGICA 2009. [DOI: 10.1655/09-009r1.1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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43
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Goebel AM, Ranker TA, Corn PS, Olmstead RG. Mitochondrial DNA evolution in the Anaxyrus boreas species group. Mol Phylogenet Evol 2009; 50:209-25. [DOI: 10.1016/j.ympev.2008.06.019] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2007] [Revised: 06/10/2008] [Accepted: 06/24/2008] [Indexed: 11/27/2022]
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44
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Hertwig S, De Sá RO, Haas A. Phylogenetic signal and the utility of 12S and 16S mtDNA in frog phylogeny. J ZOOL SYST EVOL RES 2008. [DOI: 10.1111/j.1439-0469.2004.00225.x] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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45
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Daly JW, Garraffo HM, Spande TF, Yeh HJC, Peltzer PM, Cacivio PM, Baldo JD, Faivovich J. Indolizidine 239Q and quinolizidine 275I. Major alkaloids in two Argentinian bufonid toads (Melanophryniscus). Toxicon 2008; 52:858-70. [PMID: 18848574 DOI: 10.1016/j.toxicon.2008.08.016] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2008] [Revised: 08/22/2008] [Accepted: 08/27/2008] [Indexed: 11/30/2022]
Abstract
Alkaloid profiles in skin of poison frogs/toads (Dendrobatidae, Mantellidae, Bufonidae, and Myobatrachidae) are highly dependent on diet and hence on the nature of habitat. Extracts of the two species of toads (Melanophryniscus klappenbachi and Melanophryniscus cupreuscapularis) from similar habitats in the Corrientes/Chaco Provinces of Argentina have similar profiles of alkaloids, which differ considerably in profiles from other Melanophryniscus species from Brazil, Uruguay and Argentina. Structures of two major alkaloids 239Q (1) and 275I (2) were determined by mass, FTIR, and NMR spectral analysis as 5Z,9Z-3-(1-hydroxybutyl)-5-propylindolizidine and 6Z,10E-4,6-di(pent-4-enyl) quinolizidine, respectively. A third alkaloid, 249F (3), is postulated to be a homopumiliotoxin with an unprecedented conjugated exocyclic diene moiety.
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Affiliation(s)
- John W Daly
- Laboratory of Bioorganic Chemistry, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, DHHS, Bethesda, MD 20892, USA
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Maneyro R, Naya DE, Baldo D. A new species of Melanophryniscus (Anura, Bufonidae) from Uruguay. IHERINGIA. SERIE ZOOLOGIA 2008. [DOI: 10.1590/s0073-47212008000200003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A new species of bufonid toad of the genus Melanophryniscus from northern Uruguay is described. It is included in the M. moreirae group and its external morphology is similar to Melanophryniscus sanmartini. Melanophryniscus sp. nov. is distinguished by having a light brown dorsal coloration with six darker longitudinal glandular ridges on the dorsal surface of the body and the gular region uniformly black.
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Affiliation(s)
- Raúl Maneyro
- Universidad de la República, Uruguay; Universidade Católica de Rio Grande do Sul, Brazil
| | - Daniel E. Naya
- Universidad de la República, Uruguay; Pontificia Universidad Católica de Chile, Chile
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47
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Guayasamin JM, Castroviejo-Fisher S, Ayarzagüena J, Trueb L, Vilà C. Phylogenetic relationships of glassfrogs (Centrolenidae) based on mitochondrial and nuclear genes. Mol Phylogenet Evol 2008; 48:574-95. [PMID: 18515151 DOI: 10.1016/j.ympev.2008.04.012] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2007] [Revised: 03/26/2008] [Accepted: 04/06/2008] [Indexed: 10/22/2022]
Abstract
Glassfrogs (family Centrolenidae) represent an exceptionally diverse group among Neotropical anurans, but their evolutionary relationships never have been assessed from a molecular perspective. Mitochondrial and nuclear markers were used to develop a novel hypothesis of centrolenid phylogeny. Ingroup sampling included 100 terminals, with 78 (53%) of the named species in the family, representing most of the phenotypic diversity described for the group. Thirty-five species representing taxa traditionally associated with glassfrogs were used as outgroups. Gene sampling consisted of complete or partial sequences of three mitochondrial (12S, 16S, ND1) and three nuclear markers (c-myc exon 2, RAG1, POMC) for a total of approximately 4362bp. Phylogenies were estimated using maximum parsimony, maximum likelihood, and Bayesian analyses for individual genes and combined datasets. The separate analysis of mitochondrial and nuclear datasets allowed us to clarify the relationships within glassfrogs; also, we corroborate the sister-group relationship between Allophryne ruthveni and glassfrogs. The new phylogeny differs significantly from all previous morphology-based hypotheses of relationships, and shows that hypotheses based on few traits are likely to misrepresent evolutionary history. Traits previously hypothesized as unambiguous synapomorphies are shown to be homoplastic, and all genera in the current taxonomy (Centrolene, Cochranella, Hyalinobatrachium, Nymphargus) are found to be poly- or paraphyletic. The new topology implies a South American origin of glassfrogs and reveals allopatric speciation as the most important speciation mechanism. The phylogeny profoundly affects the traditional interpretations of glassfrog taxonomy, character evolution, and biogeography-topics that now require more extensive evaluation in future studies.
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Affiliation(s)
- Juan M Guayasamin
- Natural History Museum & Biodiversity Research Center, Department of Ecology and Evolutionary Biology, The University of Kansas, Dyche Hall, 1345 Jayhawk Boulevard, Lawrence, KS 66045-7561, USA.
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Vaughan A, Mendelson JR. Taxonomy and Ecology of the Central American Toads of the Genus Crepidophryne (Anura: Bufonidae). COPEIA 2007. [DOI: 10.1643/0045-8511(2007)7[304:taeotc]2.0.co;2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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49
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Summers K, McKeon CS, Heying H, Hall J, Patrick W. Social and environmental influences on egg size evolution in frogs. J Zool (1987) 2007. [DOI: 10.1111/j.1469-7998.2006.00213.x] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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50
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Macey JR, Schulte JA, Strasburg JL, Brisson JA, Larson A, Ananjeva NB, Wang Y, Parham JF, Papenfuss TJ. Assembly of the eastern North American herpetofauna: new evidence from lizards and frogs. Biol Lett 2007; 2:388-92. [PMID: 17148411 PMCID: PMC1686176 DOI: 10.1098/rsbl.2006.0473] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Darwin first recognized the importance of episodic intercontinental dispersal in the establishment of worldwide biotic diversity. Faunal exchange across the Bering Land Bridge is a major example of such dispersal. Here, we demonstrate with mitochondrial DNA evidence that three independent dispersal events from Asia to North America are the source for almost all lizard taxa found in continental eastern North America. Two other dispersal events across Beringia account for observed diversity among North American ranid frogs, one of the most species-rich groups of frogs in eastern North America. The contribution of faunal elements from Asia via dispersal across Beringia is a dominant theme in the historical assembly of the eastern North American herpetofauna.
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Affiliation(s)
- J Robert Macey
- Museum of Vertebrate Zoology, University of California, Berkeley, CA 94720, USA.
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