Effects of salinity on bacterioplankton: field and microcosm experiments

Greenhouse gas emissions from Daihai Lake, China: Should eutrophication and salinity promote carbon emission dynamics?

Greenhouse gases (GHGs) emitted or absorbed by lakes are an important component of the global carbon cycle. However, few studies have focused on the GHG dynamics of eutrophic saline lakes, thus preventing a comprehensive understanding of the carbon cycle. Here, we conducted four sampling analyses using a floating chamber in Daihai Lake, a eutrophication saline lake in Inner Mongolia Autonomous Region, China, to explore its carbon dioxide (CO2) and methane (CH4) emissions. The mean CO2 emission flux (FCO2) and CH4 emission flux (FCH4) were 17.54 ± 14.54 mmol/m2/day and 0.50 ± 0.50 mmol/m2/day, respectively. The results indicated that Daihai Lake was a source of CO2 and CH4, and GHG emissions exhibited temporal variability. The mean CO2 partial pressure (pCO2) and CH4 partial pressure (pCH4) were 561.35 ± 109.59 µatm and 17.02 ± 13.45 µatm, which were supersaturated relative to the atmosphere. The regression and correlation analysis showed that the main influencing factors of pCO2 were wind speed, dissolved oxygen (DO), total nitrogen (TN) and Chlorophyll a (Chl.a), whereas the main influencing factors of pCH4 were water temperature (WT), Chl.a, nitrate nitrogen (NO3--N), TN, dissolved organic carbon (DOC) and water depth. Salinity regulated carbon mineralization and organic matter decomposition, and it was an important influencing factor of pCO2 and pCH4. Additionally, the trophic level index (TLI) significantly increased pCH4. Our study elucidated that salinity and eutrophication play an important role in the dynamic changes of GHG emissions. However, research on eutrophic saline lakes needs to be strengthened.

Fecal indicator bacteria diversity and decay in an estuarine mangrove ecosystem of the Xuan Thuy National Park, Vietnam

Mangroves are complex and dynamic ecosystems that are highly dependent on diverse microbial activities. In this study, laboratory experiments and field studies for fecal indicator bacteria (FIB) decay rates are carried out for the first time in the Xuan Thuy Mangrove Forest Reserve of Vietnam. Results show that there are significant differences in bacterial diversity in the water of mangrove areas that have been deforested compared to those which have been planted. The highest mean total coliform (TC) and Escherichia coli (EC) values were found in the natural mangroves (3,807±2,922 and 964±1133 CFU 100 ml^-1, respectively). The results indicated that the source of contamination and seasonal changes affect the abundance of fecal bacteria. These results were exceeding by far the safety guidelines for individual, non-commercial water supplies in most of the samples. In the planted mangrove sampling sites, the highest mean Fecal streptococci (FS) values of 1,520±1,652 CFU 100 ml^-1 were found. Microbial die-off rates were calculated over 5 days, and observed to be systematically higher for TC than for EC.

Evaluation of the ecological status of an impaired watershed by using a multi-index approach

The objective of this study was to use an integrative approach to assess the ecological status of a small river impacted by multiple sources of disturbance. The River Febros (NW Portugal) is a small and highly impacted non-regulated river; approximately 44% of the watershed area is dedicated to agriculture, but there is also some urbanization. Environmental status was evaluated using a new multi-index approach, combining quality indices for water (Water Quality Index (WQI)), benthic macroinvertebrates (Iberian Biological Monitoring Working Party Index (IBMWP)), and human modification (Riparian Forest Quality Index (QBR)); Ecological Status River Mediterranean Index (ECOSTRIMED); River Habitat Survey (RHS)). Surveys were carried out between October 2002 and 2003, along four stretches of the main course of the river for physicochemical characteristics, as well as water microbiology and macroinvertebrates. Water quality was poor at all sites (WQI averaged 30.4%) and decreased downstream. The RHS (assessment of instream habitats and the river corridor) and the QBR quantification displayed the same trend. Macroinvertebrates diversity was permanently low with only the most tolerant insects taxa present; oligochaetes dominated. The ecological status of River Febros was well represented using the experimental assessment system, where a downstream decrease in condition was noticeable (in spite of a lower water quality upstream). Our results emphasize the importance of assessing several components of disturbed ecosystems in order to ascertain overall quality and the importance of promoting improvement of the riparian gallery as a buffer against multiple agents of disturbance.

Changes in community structure of sediment bacteria along the Florida coastal everglades marsh-mangrove-seagrass salinity gradient

Community structure of sediment bacteria in the Everglades freshwater marsh, fringing mangrove forest, and Florida Bay seagrass meadows were described based on polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) patterns of 16S rRNA gene fragments and by sequencing analysis of DGGE bands. The DGGE patterns were correlated with the environmental variables by means of canonical correspondence analysis. There was no significant trend in the Shannon-Weiner index among the sediment samples along the salinity gradient. However, cluster analysis based on DGGE patterns revealed that the bacterial community structure differed according to sites. Not only were these salinity/vegetation regions distinct but the sediment bacteria communities were consistently different along the gradient from freshwater marsh, mangrove forest, eastern-central Florida Bay, and western Florida Bay. Actinobacteria- and Bacteroidetes/Chlorobi-like DNA sequences were amplified throughout all sampling sites. More Chloroflexi and members of candidate division WS3 were found in freshwater marsh and mangrove forest sites than in seagrass sites. The appearance of candidate division OP8-like DNA sequences in mangrove sites distinguished these communities from those of freshwater marsh. The seagrass sites were characterized by reduced presence of bands belonging to Chloroflexi with increased presence of those bands related to Cyanobacteria, gamma-Proteobacteria, Spirochetes, and Planctomycetes. This included the sulfate-reducing bacteria, which are prevalent in marine environments. Clearly, bacterial communities in the sediment were different along the gradient, which can be explained mainly by the differences in salinity and total phosphorus.

Microbial community dynamics based on 16S rRNA gene profiles in a Pacific Northwest estuary and its tributaries

We analyzed bacterioplankton community structure in Tillamook Bay, Oregon and its tributaries to evaluate phylogenetic variability and its relation to changes in environmental conditions along an estuarine gradient. Using eubacterial primers, we amplified 16S rRNA genes from environmental DNA and analyzed the PCR products by length heterogeneity polymerase chain reaction (LH-PCR), which discriminates products based on naturally occurring length differences. Analysis of LH-PCR profiles by multivariate ordination methods revealed differences in community composition along the estuarine gradient that were correlated with changes in environmental variables. Microbial community differences were also detected among different rivers. Using partial 16S rRNA sequences, we identified members of dominant or unique gene fragment size classes distributed along the estuarine gradient. Gammaproteobacteria and Betaproteobacteria and members of the Bacteroidetes dominated in freshwater samples, while Alphaproteobacteria, Cyanobacteria and chloroplast genes dominated in marine samples. Changes in the microbial communities correlated most strongly with salinity and dissolved silicon, but were also strongly correlated with precipitation. We also identified specific gene fragments that were correlated with inorganic nutrients. Our data suggest that there is a significant and predictable change in microbial species composition along an estuarine gradient, shifting from a more complex community structure in freshwater habitats to a community more typical of open ocean samples in the marine-influenced sites. We also demonstrate the resolution and power of LH-PCR and multivariate analyses to provide a rapid assessment of major community shifts, and show how these shifts correlate with environmental variables.

Use of microcosms to determine persistence of Escherichia coli in recreational coastal water and sediment and validation with in situ measurements

AIMS

To determine the persistence of the faecal indicator organism Escherichia coli in recreational coastal water and sediment using laboratory-based microcosms and validation with in situ measurements.

METHODS AND RESULTS

Intact sediment cores were taken from three distinct coastal sites. Overlying estuarine water was inoculated with known concentrations of E. coli and decay rates from both overlying water and sediment were determined following enumeration by the membrane filtration method at fixed time intervals over a 28-day period. It was demonstrated that E. coli may persist in coastal sediment for >28 days when incubated at 10 degrees C. Escherichia coli survival was found to have an inverse relationship with temperature in both water and sediment. In general the decay rate for E. coli was greater in water than in sediment. Small particle size and high organic carbon content were found to enhance E. coli survival in coastal sediments in the microcosms.

CONCLUSIONS

Results of this microcosm study demonstrated the more prolonged survival of E. coli in coastal sediments compared with overlying water, which may imply an increased risk of exposure because of the possible resuspension of pathogenic micro-organisms during natural turbulence or human recreational activity.

SIGNIFICANCE AND IMPACT OF THE STUDY

A more accurate estimate of exposure risk has been described which may subsequently be used in a quantitative microbial risk assessment for recreational coastal waters.

Microbiological water quality in urban coastal beaches: the influence of water dynamics and optimization of the sampling strategy

In the summer 2001, the microbiological water quality of two contiguous urban coastal beaches (Porto, Portugal) was surveyed for 18 consecutive days. The sampling strategy consisted in sampling surface water in early morning, noon and afternoon. A total of 184 samples were processed at Pastoras beach, a confined area between two jetties, and Ourigo Beach more open to the ocean. At the first beach site, all samples exceeded fecal contamination above guide values (GV) and 82.6% above mandatory values (MV) set out in the EU Bathing Water Directive; whereas at Pastoras Beach, the figures were 93.5% for GV and 26.1% for MV, showing a potential health risk. The periodicity of fecal indicators in raw sewage, the tidal status and wind conditions dramatically influenced the water quality. The quality decreased in the morning regardless of tide conditions, but improved subsequently during the day, particularly during high tide and under the influence of afternoon NW winds. These dynamics are incompatible with the fortnight routine sampling according to the recommendations of the EU Bathing Water Directive, and the strategy should be revised on a beach-to-beach basis, having in mind the profile for the coastal zone.

Survival of faecal indicator bacteria in tropical estuarine waters (Bangpakong River, Thailand)

AIMS

To investigate the survival of cultivable bacteria in the tropical Bangpakong estuary (Eastern Thailand) under different salinities and light conditions.

METHODS AND RESULTS

Dark and light microcosm experiments using membrane diffusion chambers were carried out under three different experimental conditions, namely (i) low salinity, (ii) progressive mixing with brackish water and (iii) fast mixing with high salinity water spiked with raw urban sewage. Faecal coliforms declined faster than faecal enterococci, as shown by survival T90 values ranging from 82.2 +/- 4.2 to 14.5 +/- 0.8 h and 97.5 +/- 0.4-20.6 +/- 1.2 h, respectively. The survival of freshwater heterotrophic bacteria was higher but variable (121.2 +/- 5.0-30.1 +/- 14.3 h), whereas that of heterotrophic marine bacteria was rather stable (81.5 +/- 4.2-44.6 +/- 2.5 h).

CONCLUSIONS

Overall survival was higher in low salinities. Light had a further deleterious effect, since it accelerated the decay of faecal indicators, particularly in high salinities. Faecal enterococci had a higher resistance to environmental conditions compared with faecal coliforms.

SIGNIFICANCE AND IMPACT OF THE STUDY

This study is relevant to the understanding of the behaviour of different faecal indicator bacteria and the optimization of sewage treatment plants aimed at the reduction and/or elimination of faecal load discharged into estuarine waters submitted to salinity variations.