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Uchida H, Kochiwa M, Sato T, Inoue K, Suzuki Y, Maruta E. Identification of a Heterozygous Microsatellite Marker in Pinus pumila. CYTOLOGIA 2020. [DOI: 10.1508/cytologia.85.131] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Hidenobu Uchida
- Department of Biological Sciences, Kanagawa University
- Research Institute for Integrated Science, Kanagawa University
- Bunkyo Study Center, Tokyo, The Open University of Japan
- Depatment of Chemistry, Faculty of Science, Ochanomizu University
- Department of Environmental Systems Sciences, Musashino University
| | | | - Takeshi Sato
- Department of Biological Sciences, Kanagawa University
- Research Institute for Integrated Science, Kanagawa University
| | - Kazuhito Inoue
- Department of Biological Sciences, Kanagawa University
- Research Institute for Integrated Science, Kanagawa University
| | | | - Emiko Maruta
- Department of Biological Sciences, Kanagawa University
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Bekku YS, Kurokochi H, Matsuki Y, Nishi N, Lian C. Genetic structure of
Pinus parviflora
on Mt. Fuji in relation to the hoarding behavior of the Japanese nutcracker. Ecosphere 2019. [DOI: 10.1002/ecs2.2694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
Affiliation(s)
- Yukiko Sakata Bekku
- Department of Teacher Education Tsuru University 3‐8‐1 Tahara Tsuru Yamanashi 402‐8555 Japan
| | - Hiroyuki Kurokochi
- Asian Natural Environmental Science Center The University of Tokyo 1‐1‐8, Midori‐cho Nishitokyo Tokyo 188‐0002 Japan
| | - Yu Matsuki
- Asian Natural Environmental Science Center The University of Tokyo 1‐1‐8, Midori‐cho Nishitokyo Tokyo 188‐0002 Japan
| | - Norio Nishi
- Department of Teacher Education Tsuru University 3‐8‐1 Tahara Tsuru Yamanashi 402‐8555 Japan
| | - Chunlan Lian
- Asian Natural Environmental Science Center The University of Tokyo 1‐1‐8, Midori‐cho Nishitokyo Tokyo 188‐0002 Japan
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Mohanty RP, Buchheim MA, Anderson J, Levetin E. Molecular analysis confirms the long-distance transport of Juniperus ashei pollen. PLoS One 2017; 12:e0173465. [PMID: 28273170 PMCID: PMC5342239 DOI: 10.1371/journal.pone.0173465] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2016] [Accepted: 02/22/2017] [Indexed: 11/18/2022] Open
Abstract
Although considered rare, airborne pollen can be deposited far from its place of origin under a confluence of favorable conditions. Temporally anomalous records of Cupressacean pollen collected from January air samples in London, Ontario, Canada have been cited as a new case of long-distance transport. Data on pollination season implicated Juniperus ashei (mountain cedar), with populations in central Texas and south central Oklahoma, as the nearest source of the Cupressacean pollen in the Canadian air samples. This finding is of special significance given the allergenicity of mountain cedar pollen. While microscopy is used extensively to identify particles in the air spora, pollen from all members of the Cupressaceae, including Juniperus, are morphologically indistinguishable. Consequently, we implemented a molecular approach to characterize Juniperus pollen using PCR in order to test the long-distance transport hypothesis. Our PCR results using species-specific primers confirmed that the anomalous Cupressacean pollen collected in Canada was from J. ashei. Forward trajectory analysis from source areas in Texas and the Arbuckle Mountains in Oklahoma and backward trajectory analysis from the destination area near London, Ontario were completed using models implemented in HYSPLIT4 (Hybrid Single-Particle Lagrangian Integrated Trajectory). Results from these trajectory analyses strongly supported the conclusion that the J. ashei pollen detected in Canada had its origins in Texas or Oklahoma. The results from the molecular findings are significant as they provide a new method to confirm the long-distance transport of pollen that bears allergenic importance.
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Affiliation(s)
- Rashmi Prava Mohanty
- Department of Biological Sciences, The University of Tulsa, Tulsa, Oklahoma, United States of America
| | - Mark Alan Buchheim
- Department of Biological Sciences, The University of Tulsa, Tulsa, Oklahoma, United States of America
| | | | - Estelle Levetin
- Department of Biological Sciences, The University of Tulsa, Tulsa, Oklahoma, United States of America
- * E-mail:
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Hao ZZ, Liu YY, Nazaire M, Wei XX, Wang XQ. Molecular phylogenetics and evolutionary history of sect. Quinquefoliae (Pinus): implications for Northern Hemisphere biogeography. Mol Phylogenet Evol 2015; 87:65-79. [PMID: 25800283 DOI: 10.1016/j.ympev.2015.03.013] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2014] [Revised: 02/24/2015] [Accepted: 03/14/2015] [Indexed: 01/15/2023]
Abstract
Climatic changes and tectonic events in the Cenozoic have greatly influenced the evolution and geographic distribution of the temperate flora. Such consequences should be most evident in plant groups that are ancient, widespread, and diverse. As one of the most widespread genera of trees, Pinus provides a good model for investigating the history of species diversification and biogeographic disjunction in the Northern Hemisphere. In this study, we reconstructed the phylogeny and investigated the evolutionary and biogeographic history of sect. Quinquefoliae (Pinus), a species-rich lineage disjunctly distributed in Asia, Europe and North America, based on complete taxon sampling and by using nine DNA fragments from chloroplast (cp), mitochondrial (mt) and nuclear genomes. The monophyly of the three subsections, Krempfianae, Gerardianae, and Strobus, is well-supported by cpDNA and nuclear gene phylogenies. However, neither subsect. Gerardianae nor subsect. Strobus forms a monophyletic group in the mtDNA phylogeny, in which sect. Quinquefoliae was divided into two major clades, one consisting of the North American and northeastern Asian species as well as the European P. peuce of subsect. Strobus, and the other comprising the remaining Eurasian species belonging to three subsections. The significant topological incongruence among the gene trees, in conjunction with divergence time estimation and ancestral area reconstruction, indicates that both ancient and relatively recent introgressive hybridization events occurred in the evolution of sect. Quinquefoliae, particularly in northeastern Asia and northwestern North America. In addition, the phylogenetic analysis suggests that the species of subsect. Strobus from subtropical eastern Asia and neighboring areas may have a single origin, although species non-monophyly is very widespread in the nuclear gene trees. Moreover, our study seems to support a Tethyan origin of sect. Quinquefoliae given the distributions and phylogenetic positions of subsects. Krempfianae and Gerardianae, and also highlights the importance of active mountain buildings and climatic changes during the Late Neogene in shaping the species diversity and geographic distribution of Pinus.
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Affiliation(s)
- Zhen-Zhen Hao
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Yan-Yan Liu
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Mare Nazaire
- Rancho Santa Ana Botanic Garden, Claremont, CA 91711, USA
| | - Xiao-Xin Wei
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
| | - Xiao-Quan Wang
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
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McIntosh EJ, Rossetto M, Weston PH, Wardle GM. Maintenance of strong morphological differentiation despite ongoing natural hybridization between sympatric species of Lomatia (Proteaceae). ANNALS OF BOTANY 2014; 113:861-872. [PMID: 24489011 PMCID: PMC3962242 DOI: 10.1093/aob/mct314] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2013] [Accepted: 12/13/2013] [Indexed: 06/03/2023]
Abstract
BACKGROUND AND AIMS When species cohesion is maintained despite ongoing natural hybridization, many questions are raised about the evolutionary processes operating in the species complex. This study examined the extensive natural hybridization between the Australian native shrubs Lomatia myricoides and L. silaifolia (Proteaceae). These species exhibit striking differences in morphology and ecological preferences, exceeding those found in most studies of hybridization to date. METHODS Nuclear microsatellite markers (nSSRs), genotyping methods and morphometric analyses were used to uncover patterns of hybridization and the role of gene flow in morphological differentiation between sympatric species. KEY RESULTS The complexity of hybridization patterns differed markedly between sites, however, signals of introgression were present at all sites. One site provided evidence of a large hybrid swarm and the likely presence of multiple hybrid generations and backcrosses, another site a handful of early generational hybrids and a third site only traces of admixture from a past hybridization event. The presence of cryptic hybrids and a pattern of morphological bimodality amongst hybrids often disguised the extent of underlying genetic admixture. CONCLUSIONS Distinct parental habitats and phenotypes are expected to form barriers that contribute to the rapid reversion of hybrid populations to their parental character state, due to limited opportunities for hybrid/intermediate advantage. Furthermore, strong genomic filters may facilitate continued gene flow between species without the danger of assimilation. Stochastic fire events facilitate temporal phenological isolation between species and may partly explain the bi-directional and site-specific patterns of hybridization observed. Furthermore, the findings suggest that F1 hybrids are rare, and backcrosses may occur rapidly following these initial hybridization events.
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Affiliation(s)
- Emma J. McIntosh
- The Royal Botanic Gardens and Domain Trust, Sydney, New South Wales, Australia
- School of Biological Sciences, the University of Sydney, Sydney, New South Wales, Australia
| | - Maurizio Rossetto
- The Royal Botanic Gardens and Domain Trust, Sydney, New South Wales, Australia
| | - Peter H. Weston
- The Royal Botanic Gardens and Domain Trust, Sydney, New South Wales, Australia
| | - Glenda M. Wardle
- School of Biological Sciences, the University of Sydney, Sydney, New South Wales, Australia
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Ruhsam M, Hollingsworth PM, Ennos RA. Patterns of mating, generation of diversity, and fitness of offspring in a Geum hybrid swarm. Evolution 2013; 67:2728-40. [PMID: 24033179 DOI: 10.1111/evo.12147] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2012] [Accepted: 04/16/2013] [Indexed: 12/01/2022]
Abstract
To understand the evolutionary consequences of hybridization between the outcrossing plant Geum rivale (Rosaceae) and the selfer Geum urbanum, we tested the predictions of two simple models that assume either (A) low or (B) high pollen fitness in hybrids. Model A predicts only four genotypic classes (G. rivale, G. rivale backcross [BC(R)], F1, and Geum urbanum) and asymmetric introgression from inbreeding to outbreeding species. Model B predicts additional genotypic classes and potential generation of novel inbreeding lines in the hybrid swarm. Amplified fragment length polymorphism (AFLP) analysis of adults revealed only the four genotypes predicted by model A. However, microsatellite analysis of parent-progeny arrays demonstrated production of selfed offspring by F1 and BC(R) maternal parents and contribution of these genotypes to outcross pollen pools, as predicted by model B. Moreover, AFLP and morphological analysis showed that the offspring generation comprised genotypes and phenotypes covering the entire spectrum of variation between the two parental species, in line with model B. A common garden experiment indicated no systematic reduction in fitness of offspring derived from hybrid parents. The genetic structure of the adults in the Geum hybrid swarm cannot be explained by restricted mating patterns but may result from ecological selection acting on a diverse offspring population.
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Affiliation(s)
- Markus Ruhsam
- University of Edinburgh, Institute of Evolutionary Biology, Ashworth Laboratories, Edinburgh, EH3 9JT, United Kingdom; Royal Botanic Garden Edinburgh, Edinburgh, EH3 5LR, United Kingdom.
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Williams CG, von Aderkas P. Marking live conifer pollen for long-distance dispersal experiments. Oecologia 2011; 165:255-260. [PMID: 21042921 DOI: 10.1007/s00442-010-1825-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2010] [Accepted: 10/07/2010] [Indexed: 05/30/2023]
Abstract
Long-distance dispersal (LDD) theory requires a method for marking live LDD pollen. Such a method must complement more intensive sampling methods inclusive of molecular cytogenetics, proteomics and genomics. We developed a new method for marking live Pinus taeda pollen using two dyes, rhodamine 123 and aniline blue, dissolved in a sucrose solution. Marked and unmarked pollen were compared with respect to in vitro germination, storage, terminal velocity, and in vivo pollen tube penetration of ovules. We found that: (1) both types of marked pollen retained their capacity for germination, (2) both types of marked pollen had similar aerodynamic properties when compared to unmarked pollen controls, (3) marked pollen retained its germination capacity for 48 h, and (4) of the marked pollen, only the aniline-marked pollen penetrated ovules during pollination. Germination declined rapidly for both types of marked pollen after 48 h and before 37 days at -20°C storage, while unmarked pollen lots retained 93% germination at all stages. This method for marking live P. taeda pollen is feasible for tracing LDD pollen only if released and deposited within 48 h of dye treatment.
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Williams CG, von Aderkas P. Marking live conifer pollen for long-distance dispersal experiments. Oecologia 2010; 165:249-54. [DOI: 10.1007/s00442-010-1817-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2010] [Accepted: 10/08/2010] [Indexed: 10/18/2022]
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RAHMÉ J, WIDMER A, KARRENBERG S. Pollen competition as an asymmetric reproductive barrier between two closely relatedSilenespecies. J Evol Biol 2009; 22:1937-43. [DOI: 10.1111/j.1420-9101.2009.01803.x] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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Hasegawa Y, Suyama Y, Seiwa K. Pollen donor composition during the early phases of reproduction revealed by DNA genotyping of pollen grains and seeds of Castanea crenata. THE NEW PHYTOLOGIST 2009; 182:994-1002. [PMID: 19383107 DOI: 10.1111/j.1469-8137.2009.02806.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
In plants, pollen donor composition can differ during the early phases of reproduction through various selection mechanisms favouring self, related or nonrelated pollen donors, but such differences have not been examined under natural conditions because paternity is difficult to analyse in a natural setting. Here, we performed paternity analyses based on microsatellite genotyping of individual pollen grains deposited on female flowers (n = 773) and seeds (n = 304) to evaluate pollen donor composition from three individuals of the insect-pollinated monoecious tree Castanea crenata in a natural forest. Spatial genetic structure was also investigated. A mean self-pollen rate of 90.2% was observed at the pollination stage, but a low selfing rate of 0.3% was observed at the seed stage. In outcross events, however, pairwise distance and relatedness between maternal and paternal parents were not different between pollination and seed stages. We also observed significant positive relatedness, based on clear fine-scale genetic structure of individual trees within 80 m of one another, and 71% of seeds were derived using pollen grains of related trees within 80 m. The results suggest that the mechanism of self-incompatibility strongly avoids self-pollen before seed production. However, the avoidance of biparental inbreeding was not obvious between pollination and seed stages.
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Affiliation(s)
- Yoichi Hasegawa
- Laboratory of Forest Ecology, Graduate School of Agricultural Science, Tohoku University, Naruko-onsen, Osaki, Miyagi 989-6711, Japan
| | - Yoshihisa Suyama
- Laboratory of Forest Ecology, Graduate School of Agricultural Science, Tohoku University, Naruko-onsen, Osaki, Miyagi 989-6711, Japan
| | - Kenji Seiwa
- Laboratory of Forest Ecology, Graduate School of Agricultural Science, Tohoku University, Naruko-onsen, Osaki, Miyagi 989-6711, Japan
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