Polymorphism of human CD1a, CD1d, and CD1e in exon 2 in Chinese Han and She ethnic populations

CD1A, D and E gene polymorphisms in a North African population from Morocco

CD1 molecules are specialized in capturing and presenting lipids and glycolipids to distinct subsets of T and NKT cells. Glycolipid presentation could play a significant role in the immune response against microbial infections. There are five closely linked CD1 genes in humans, named CD1A, B, C, D, and E, which all show a limited polymorphism. In this study, exon 2 polymorphisms of CD1A, CD1D and CD1E were investigated and allele, genotype and haplotype frequencies of these loci were reported in a Moroccan population. A comparison with allele, genotype and haplotype frequencies observed in other geographic areas was also performed. Results confirmed the presence of ethnic differences in CD1 polymorphism, mainly in CD1D (in this population two additional CD1D variant alleles, CD1D(∗)03 and CD1D(∗)04, were described) and E genes. These data could be useful to evaluate a possible pathogenetic role of CD1 in diseases. Increasing the knowledge in this field may offer possibilities for the development of new immunotherapeutic approaches.

Characterisation of non-classical MHC class I genes in the Tasmanian devil (Sarcophilus harrisii)

The Tasmanian devil (Sarcophilus harrisii) is a carnivorous marsupial that is under threat of extinction due to an unusual transmissible disease called Devil Facial Tumour Disease (DFTD). Previous studies on the classical MHC genes have provided important insights into immune responses in this endangered species; however, so far, very little is known about the non-classical MHC genes of this species, which can also play significant roles in the immune system. Here, we report characterisation of five non-classical class I genes in the Tasmanian devil, including Saha-UD, -UK, -UM, -MR1 and -CD1. Saha-UD has been isolated previously and is known to have low genetic polymorphism, though its categorisation as classical or non-classical gene has remained undetermined. In this study, we observed tissue-specific expression of Saha-UD, suggesting that it is more characteristic of a non-classical gene. Restricted tissue expression patterns were also observed for other genes, with an exception of Saha-MR1 being ubiquitously expressed in all examined tissues. Saha-UK, -UM and -MR1 were found to be genetically monomorphic, while four alleles were found at Saha-CD1 with signs of positive selection detected within the α1 domain. Among the four Saha-CD1 alleles, one predominant allele (Saha-CD1*01) showed a high allele frequency of 0.906 in the Tasmanian devil population, resulting in a low heterozygosity (0.188) at this locus. Alternative splicing takes place in Saha-CD1, giving rise to a full-length transcript and a splice variant lacking intact antigen-binding, β2m-binding, transmembrane and cytoplasmic domains.

CD1a and CD1d genes polymorphisms in breast, colorectal and lung cancers

CD1 molecules might contribute to anti-tumor immune response by presentation of tumor-derived lipid and glycolipid antigens to T cells and NKT cells. Polymorphisms in CD1 genes have been suggested to modify ligand binding of CD1 molecules and thereby change the antigen presenting ability of these molecules. The aim of this study was to investigate the exon 2 polymorphisms of CD1a and CD1d in several high incident cancers in Iran. For this purpose, 201 female breast cancer patients and 207 healthy women, 64 lung cancer patients and 95 healthy individuals and 109 patients with colorectal cancer and 109 healthy controls were recruited to this study. Using PCR-SSP method, no significant correlation was found in genotype and allele frequencies of CD1a between all three studied groups and their control counterparts. Moreover, a dominant frequency of CD1d 01 (A) allele was observed in the majority of studied individuals. No significant association between the CD1 polymorphisms and prognostic factors in breast, lung and colorectal cancers was detected. Our results highlight the conserved nature of CD1 genes and may point to the immuoregulatory functions of CD1 molecules in cancer that can be exerted through fine tuning of NK, T and NKT cells.