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Hansen LS, Laursen SF, Bahrndorff S, Kargo M, Sørensen JG, Sahana G, Nielsen HM, Kristensen TN. Estimation of genetic parameters for the implementation of selective breeding in commercial insect production. Genet Sel Evol 2024; 56:21. [PMID: 38528443 DOI: 10.1186/s12711-024-00894-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2023] [Accepted: 03/18/2024] [Indexed: 03/27/2024] Open
Abstract
BACKGROUND There is a burgeoning interest in using insects as a sustainable source of food and feed, particularly by capitalising on various waste materials and by-products that are typically considered of low value. Enhancing the commercial production of insects can be achieved through two main approaches: optimising environmental conditions and implementing selective breeding strategies. In order to successfully target desirable traits through selective breeding, having a thorough understanding of the genetic parameters pertaining to those traits is essential. In this study, a full-sib half-sib mating design was used to estimate variance components and heritabilities for larval size and survival at day seven of development, development time and survival from egg to adult, and to estimate correlations between these traits, within an outbred population of house flies (Musca domestica), using high-throughput phenotyping for data collection. RESULTS The results revealed low to intermediate heritabilities and positive genetic correlations between all traits except development time and survival to day seven of development and from egg to adulthood. Surprisingly, larval size at day seven exhibited a comparatively low heritability (0.10) in contrast to development time (0.25), a trait that is believed to have a stronger association with overall fitness. A decline in family numbers resulting from low mating success and high overall mortality reduced the amount of available data which resulted in large standard errors for the estimated parameters. Environmental factors made a substantial contribution to the phenotypic variation, which was overall high for all traits. CONCLUSIONS There is potential for genetic improvement in all studied traits and estimates of genetic correlations indicate a partly shared genetic architecture among the traits. All estimates have large standard errors. Implementing high-throughput phenotyping is imperative for the estimation of genetic parameters in fast developing insects, and facilitates age synchronisation, which is vital in a breeding population. In spite of endeavours to minimise non-genetic sources of variation, all traits demonstrated substantial influences from environmental components. This emphasises the necessity of thorough attention to the experimental design before breeding is initiated in insect populations.
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Affiliation(s)
- Laura Skrubbeltrang Hansen
- Center for Quantitative Genetics and Genomics, Aarhus University, C F Møllers Allé 3, 8000, Aarhus, Denmark.
| | - Stine Frey Laursen
- Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220, Aalborg, Denmark
| | - Simon Bahrndorff
- Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220, Aalborg, Denmark
| | - Morten Kargo
- Center for Quantitative Genetics and Genomics, Aarhus University, C F Møllers Allé 3, 8000, Aarhus, Denmark
| | | | - Goutam Sahana
- Center for Quantitative Genetics and Genomics, Aarhus University, C F Møllers Allé 3, 8000, Aarhus, Denmark
| | - Hanne Marie Nielsen
- Center for Quantitative Genetics and Genomics, Aarhus University, C F Møllers Allé 3, 8000, Aarhus, Denmark
| | - Torsten Nygaard Kristensen
- Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220, Aalborg, Denmark
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Role transformation of fecundity and viability: The leading cause of fitness costs associated with beta-cypermethrin resistance in Musca domestica. PLoS One 2020; 15:e0228268. [PMID: 31999782 PMCID: PMC6992221 DOI: 10.1371/journal.pone.0228268] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2019] [Accepted: 01/12/2020] [Indexed: 02/03/2023] Open
Abstract
Fitness is closely associated with the development of pesticide resistance in insects, which determines the control strategies employed to target species and the risks of toxicity faced by non-target species. After years of selections with beta-cypermethrin in laboratory, a strain of housefly was developed that was 684,521.62-fold resistant (CRR) compared with the susceptible strain (CSS). By constructing ≤ 21 d and ≤ 30 d life tables, the differences in life history parameters between CSS and CRR were analyzed. The total production numbers of all the detected development stages in CRR were lower than in CSS. Except for the lower mortality of larvae, all the other detected mortalities in CRR were higher than in CSS. ♀:♂ and normal females of CRR were also lower than those of CSS. For CRR, the relative fitness was 0.25 in the ≤ 21 d life table and 0.24 in the ≤ 30 d life table, and a lower intrinsic rate of increase (rm) and net reproductive rate (Ro) were detected. Based on phenotype correlation and structural equation model (SEM) analyses, fecundity and viability were the only directly positive fitness components affecting fitness in CRR and CSS, and the other components played indirect roles in fitness. The variations of the relationships among fitness, fecundity and viability seemed to be the core issue resulting in fitness differences between CRR and CSS. The interactions among all the detected fitness components and the mating frequency-time curves appeared to be distinctly different between CRR and CSS. In summary, fecundity and its related factors separately played direct and indirect roles in the fitness costs of a highly beta-cypermethrin-resistant housefly strain.
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Abstract
For nearly a century adaptive landscapes have provided overviews of the evolutionary process and yet they remain metaphors. We redefine adaptive landscapes in terms of biological processes rather than descriptive phenomenology. We focus on the underlying mechanisms that generate emergent properties such as epistasis, dominance, trade-offs and adaptive peaks. We illustrate the utility of landscapes in predicting the course of adaptation and the distribution of fitness effects. We abandon aged arguments concerning landscape ruggedness in favor of empirically determining landscape architecture. In so doing, we transform the landscape metaphor into a scientific framework within which causal hypotheses can be tested.
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Affiliation(s)
- Xiao Yi
- BioTechnology Institute, University of Minnesota, St. Paul, MN
| | - Antony M Dean
- BioTechnology Institute, University of Minnesota, St. Paul, MN
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN
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Foucaud J, Moreno C, Pascual M, Rezende EL, Castañeda LE, Gibert P, Mery F. Introduced Drosophila subobscura populations perform better than native populations during an oviposition choice task due to increased fecundity but similar learning ability. Ecol Evol 2016; 6:1725-36. [PMID: 26925216 PMCID: PMC4755011 DOI: 10.1002/ece3.2015] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2015] [Revised: 01/25/2016] [Accepted: 01/27/2016] [Indexed: 12/13/2022] Open
Abstract
The success of invasive species is tightly linked to their fitness in a putatively novel environment. While quantitative components of fitness have been studied extensively in the context of invasive species, fewer studies have looked at qualitative components of fitness, such as behavioral plasticity, and their interaction with quantitative components, despite intuitive benefits over the course of an invasion. In particular, learning is a form of behavioral plasticity that makes it possible to finely tune behavior according to environmental conditions. Learning can be crucial for survival and reproduction of introduced organisms in novel areas, for example, for detecting new predators, or finding mates or oviposition sites. Here we explored how oviposition performance evolved in relation to both fecundity and learning during an invasion, using native and introduced Drosophila subobscura populations performing an ecologically relevant task. Our results indicated that, under comparable conditions, invasive populations performed better during our oviposition task than did native populations. This was because invasive populations had higher fecundity, together with similar cognitive performance when compared to native populations, and that there was no interaction between learning and fecundity. Unexpectedly, our study did not reveal an allocation trade‐off (i.e., a negative relationship) between learning and fecundity. On the contrary, the pattern we observed was more consistent with an acquisition trade‐off, meaning that fecundity could be limited by availability of resources, unlike cognitive ability. This pattern might be the consequence of escaping natural enemies and/or competitors during the introduction. The apparent lack of evolution of learning may indicate that the introduced population did not face novel cognitive challenges in the new environment (i.e., cognitive “pre‐adaptation”). Alternatively, the evolution of learning may have been transient and therefore not detected.
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Affiliation(s)
- Julien Foucaud
- Laboratoire Evolution, Génomes, Comportement et Ecologie UMR-CNRS 9191 Gif/Yvette France
| | - Céline Moreno
- Laboratoire Evolution, Génomes, Comportement et Ecologie UMR-CNRS 9191 Gif/Yvette France
| | - Marta Pascual
- Department of Genetics and IrBio Universitat de Barcelona Av. Diagonal 643 08028 Barcelona Spain
| | - Enrico L Rezende
- Department of Life Sciences University of Roehampton Holybourne Avenue London SW15 4JD UK
| | - Luis E Castañeda
- Instituto de Ciencias Ambientales y Evolutivas Universidad Austral de Chile PO 5090000 Valdivia Chile
| | - Patricia Gibert
- Université de Lyon Université Lyon1 Laboratoire de Biométrie et Biologie Evolutive UMR CNRS 5558 43 Bd du 11 Novembre 1918 69622 Villeurbanne Cedex France
| | - Frederic Mery
- Laboratoire Evolution, Génomes, Comportement et Ecologie UMR-CNRS 9191 Gif/Yvette France
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Vázquez DP, Ramos-Jiliberto R, Urbani P, Valdovinos FS. A conceptual framework for studying the strength of plant-animal mutualistic interactions. Ecol Lett 2015; 18:385-400. [DOI: 10.1111/ele.12411] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2014] [Revised: 09/23/2014] [Accepted: 01/04/2015] [Indexed: 11/30/2022]
Affiliation(s)
- Diego P. Vázquez
- Instituto Argentino de Investigaciones de las Zonas Áridas; CONICET; CC 507, 5500 Mendoza Argentina
- Facultad de Ciencias Exactas y Naturales; Universidad Nacional de Cuyo; Centro Universitario; M5502JMA Mendoza Argentina
| | - Rodrigo Ramos-Jiliberto
- Centro Nacional del Medio Ambiente; Fundación de la Universidad de Chile; Av. Larraín 9975 La Reina Santiago Chile
- Instituto de Filosofía y Ciencias de la Complejidad; Los Alerces 3024 Ñuñoa Santiago Chile
| | - Pasquinell Urbani
- Centro Nacional del Medio Ambiente; Fundación de la Universidad de Chile; Av. Larraín 9975 La Reina Santiago Chile
| | - Fernanda S. Valdovinos
- Department of Ecology and Evolutionary Biology; University of Arizona; BSW 310, 1041 Lowell St. Tucson AZ 85721 USA
- Pacific Ecoinformatics and Computational Ecology Lab; 1604 McGee Avenue Berkeley CA 94703 USA
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Pekkala N, Kotiaho JS, Puurtinen M. Laboratory relationships between adult lifetime reproductive success and fitness surrogates in a Drosophila littoralis population. PLoS One 2011; 6:e24560. [PMID: 21931756 PMCID: PMC3170365 DOI: 10.1371/journal.pone.0024560] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2010] [Accepted: 08/14/2011] [Indexed: 11/22/2022] Open
Abstract
The difficulties in measuring total fitness of individuals necessitate the use of fitness surrogates in ecological and evolutionary studies. These surrogates can be different components of fitness (e.g. survival or fecundity), or proxies more uncertainly related to fitness (e.g. body size or growth rate). Ideally, fitness would be measured over the lifetime of individuals; however, more convenient short-time measures are often used. Adult lifetime reproductive success (adult LRS) is closely related to the total fitness of individuals, but it is difficult to measure and rarely included in fitness estimation in experimental studies. We explored phenotypic correlations between female adult LRS and various commonly used fitness components and proxies in a recently founded laboratory population of Drosophila littoralis. Noting that survival is usually higher in laboratory conditions than in nature, we also calculated adjusted adult LRS measures that give more weight to early reproduction. The lifetime measures of fecundity, longevity, and offspring viability were all relatively highly correlated with adult LRS. However, correlations with short-time measures of fecundity and offspring production varied greatly depending on the time of measurement, and the optimal time for measurement was different for unadjusted compared to adjusted adult LRS measures. Correlations between size measures and adult LRS varied from weak to modest, leg size and female weight having the highest correlations. Our results stress the importance of well-founded choice of fitness surrogates in empirical research.
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Affiliation(s)
- Nina Pekkala
- Centre of Excellence in Evolutionary Research, Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland.
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Benkovskaya GV. Opportunities and limitations of changes in lifespan in laboratory experiment. ADVANCES IN GERONTOLOGY 2011. [DOI: 10.1134/s2079057011030039] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Le Lann C, Wardziak T, van Baaren J, van Alphen JJM. Thermal plasticity of metabolic rates linked to life-history traits and foraging behaviour in a parasitic wasp. Funct Ecol 2010. [DOI: 10.1111/j.1365-2435.2010.01813.x] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Luquet E, Léna JP, David P, Joly P, Lengagne T, Perrin N, Plénet S. Consequences of genetic erosion on fitness and phenotypic plasticity in European tree frog populations (Hyla arborea). J Evol Biol 2010; 24:99-110. [PMID: 20964778 DOI: 10.1111/j.1420-9101.2010.02138.x] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
The detrimental effects of genetic erosion on small isolated populations are widely recognized contrary to their interactions with environmental changes. The ability of genotypes to plastically respond to variability is probably essential for the persistence of these populations. Genetic erosion impact may be exacerbated if inbreeding affects plastic responses or if their maintenance were at higher phenotypic costs. To understand the interplay 'genetic erosion-fitness-phenotypic plasticity', we experimentally compared, in different environments, the larval performances and plastic responses to predation of European tree frogs (Hyla arborea) from isolated and connected populations. Tadpoles from isolated populations were less performant, but the traits affected were environmental dependant. Heterosis observed in crosses between isolated populations allowed attributing their low fitness to inbreeding. Phenotypic plasticity can be maintained in the face of genetic erosion as inducible defences in response to predator were identical in all populations. However, the higher survival and developmental costs for isolated populations in harsh conditions may lead to an additional fitness loss for isolated populations.
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Affiliation(s)
- E Luquet
- CNRS UMR 5023 Ecologie des Hydrosystèmes Fluviaux, Université Claude Bernard Lyon1, Villeurbanne Cedex, France.
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Steigenga MJ, Fischer K. Fitness consequences of variation in developmental temperature in a butterfly. J Therm Biol 2009. [DOI: 10.1016/j.jtherbio.2009.03.001] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Scott JG, Liu N, Kristensen M, Clark AG. A case for sequencing the genome of Musca domestica (Diptera: Muscidae). JOURNAL OF MEDICAL ENTOMOLOGY 2009; 46:175-182. [PMID: 19351068 DOI: 10.1603/033.046.0202] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
House flies are carriers of >100 devastating diseases that have severe consequences for human and animal health. Despite the fact that it is a passive vector, a key bottleneck to progress in controlling the human diseases transmitted by house flies is lack of knowledge of the basic molecular biology of this species. Sequencing of the house fly genome will provide important inroads to the discovery of novel target sites for house fly control, understanding of the house fly immune response, rapid elucidation of insecticide resistance genes, and understanding of numerous aspects of the basic biology of this insect pest. The ability of the house fly to prosper in a remarkably septic environment motivates analysis of its innate immune system. Its polymorphic sex determination system, with male-determining factors on either the autosomes or the Y chromosome, is ripe for a genomic analysis. Sequencing of the house fly genome would allow the first opportunity to study the interactions between a pest insect and its parasitoid (Nasonia vitripennis) at the whole genome level. In addition, the house fly is well placed phylogenetically to leverage analysis of the multiple Dipteran genomes that have been sequenced (including several mosquito and Drosophila species). The community of researchers investigating Musca domestica are well prepared and highly motivated to apply genomic analyses to their widely varied research programs.
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Affiliation(s)
- J G Scott
- Department of Entomology, Comstock Hall, Cornell University, Ithaca, NY 14853, USA.
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