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Kuttan R, Radhakrishnan AN. Biochemistry of the hydroxyprolines. ADVANCES IN ENZYMOLOGY AND RELATED AREAS OF MOLECULAR BIOLOGY 2006; 37:273-347. [PMID: 4347620 DOI: 10.1002/9780470122822.ch5] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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2
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Coimbra MA, Waldron KW, Selvendran RR. Isolation and characterisation of cell wall polymers from olive pulp (Olea europaea L.). Carbohydr Res 1994. [DOI: 10.1016/0008-6215(94)90019-1] [Citation(s) in RCA: 52] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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3
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Ryden P, Selvendran RR. Cell-wall polysaccharides and glycoproteins of parenchymatous tissues of runner bean (Phaseolus coccineus). Biochem J 1990; 269:393-402. [PMID: 2167068 PMCID: PMC1131590 DOI: 10.1042/bj2690393] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
1. Polymers were solubilized from the cell walls of parenchyma from mature runner-bean pods with minimum degradation by successive extractions with cyclohexane-trans-1,2-diamine-NNN'N'-tetra-acetate (CDTA), Na2CO3 and KOH to leave the alpha-cellulose residue, which contained cross-linked pectic polysaccharides and Hyp-rich glycoproteins. These were solubilized with chlorite/acetic acid and cellulase. The polymers were fractionated by anion-exchange chromatography, and fractions were subjected to methylation analysis. 2. The pectic polysaccharides differed in their ease of extraction, and a small proportion were highly cross-linked. The bulk of the pectic polysaccharides solubilized by CDTA and Na2CO3 were less branched than those solubilized by KOH. There was good evidence that most of the pectic polysaccharides were not degraded during extraction. 3. The protein-containing fractions included Hyp-rich and Hyp-poor glycoproteins associated with easily extractable pectic polysaccharides, Hyp-rich glycoproteins solubilized with 4M-KOH+borate, the bulk of which were not associated with pectic polysaccharides, and highly cross-linked Hyp-rich glycoproteins. 4. Isodityrosine was not detected, suggesting that it does not have a (major) cross-linking role in these walls. Instead, it is suggested that phenolics, presumably linked to C-5 of 3,5-linked Araf residues of Hyp-rich glycoproteins, serve to cross-link some of the polymers. 5. There were two main types of xyloglucan, with different degrees of branching. The bulk of the less branched xyloglucans were solubilized by more-concentrated alkali. The anomeric configurations of the sugars in one of the highly branched xyloglucans were determined by 13C-n.m.r. spectroscopy. 6. The structural features of the cell-wall polymers and complexes are discussed in relation to the structure of the cell walls of parenchyma tissues.
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Affiliation(s)
- P Ryden
- A.F.R.C. Institute of Food Research, Norwich Laboratory, U.K
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4
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Calhoon RE, Aaronson S. Evidence for affinities among major taxa from the analysis of amino acid frequencies in glycoproteins from cell surface structures. Ann N Y Acad Sci 1981; 361:472-80. [PMID: 6941735 DOI: 10.1111/j.1749-6632.1981.tb46539.x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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5
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Calhoon RE, Aaronson S. EVIDENCE FOR AFFINITIES AMONG MAJOR TAXA FROM THE ANALYSIS OF AMINO ACID FREQUENCIES IN GLYCOPROTEINS FROM CELL SURFACE STRUCTURES. Ann N Y Acad Sci 1981. [DOI: 10.1111/j.1749-6632.1981.tb54385.x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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6
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Allen AK, Desai NN, Neuberger A, Creeth JM. Properties of potato lectin and the nature of its glycoprotein linkages. Biochem J 1978; 171:665-74. [PMID: 666730 PMCID: PMC1184012 DOI: 10.1042/bj1710665] [Citation(s) in RCA: 160] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
1. Potato lectin is a glycoprotein that contains about 47% (by weight) l-arabinose, 3% d-galactose and 11% hydroxyproline. It has a monomeric molecular weight of about 50000 and probably exists as a monomer-dimer system in aqueous solution, with the monomer predominating. It has a very high viscosity, which would indicate either that the molecule is very expanded or that it is an elongated ellipsoid. 2. After prolonged proteolytic digestion of a reduced and carboxymethylated derivative of the lectin, a glycopeptide was isolated (of mol.wt. 32000-34000) that included all the carbohydrate and hydroxyproline of the original glycoprotein but less than 30% of the total original amino acid residues. 3. The arabinose of the glycoprotein is present exclusively as the beta-arabinofuranoside and this includes those residues that are directly linked to the hydroxyproline residues of the polypeptide chain. All the arabinose of the glycoprotein is linked to the polypeptide chain through the hydroxyproline residues; the ratio of arabinose to hydroxyproline is 3.4:1. Although alpha-arabinofuranosides are known to be present in arabinans and arabinogalactans, the natural occurrence of beta-arabinofuranosides has not previously been reported. 4. Nine or ten serine residues of the polypeptide chain are substituted with single alpha-galactopyranoside residues that can be removed by the action of alpha-galactosidase from coffee beans but not by a beta-galactosidase. This is the first report of an alpha-galactoside linkage to serine. The effect of alpha-galactosidase is much greater on a glycopeptide from which the arabinose has been already removed, which indicates a steric hindrance of the galactosidase action by adjacent chains of arabinosides. 5. In 0.5m-NaOH (pH13.7), galactose residues were removed from the serine residues of the glycopeptide by a process of beta-elimination. This reaction took place very slowly in the intact glycopeptide but much more rapidly when the arabinofuranoside residues had been removed. This inhibitory effect of the arabinofuranoside residues on the beta-elimination reaction is likely to be due to a negative charge on the hydroxy groups of the adjacent arabinofuranoside residues, which would be ionized at this high pH value. 6. It is suggested that potato lectin may be representative of a class of soluble plant glycoproteins that would include precursors of the cell-wall glycoprotein extensin. If this is the case, extensin should also contain beta-l-arabinofuranosides linked to hydroxyproline and alpha-d-galactopyranosides linked to serine residues of the polypeptide chain.
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7
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Arrigoni O, Arrigoni-Liso R, Calabrese G. Ascorbic acid requirement for biosynthesis of hydroxyproline-containing proteins in plants. FEBS Lett 1977; 82:135-8. [PMID: 913567 DOI: 10.1016/0014-5793(77)80903-4] [Citation(s) in RCA: 47] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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8
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Yamagishi T, Matsuda K, Watanabe T. Isolation and partial characterization of proteoglycans from rice bran. Carbohydr Res 1975. [DOI: 10.1016/s0008-6215(00)83496-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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9
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Bailey RW, Kauss H. Extraction of hydroxyproline-containing proteins and pectic substances from cell walls of growing and non-growing mung bean hypocotyl segments. PLANTA 1974; 119:233-245. [PMID: 24442500 DOI: 10.1007/bf00429047] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/1974] [Indexed: 06/03/2023]
Abstract
Elongating upper and non-elongating lower segments of mung bean hypocotyls (Phaseolus aureus Roxb.) were compared in their ability to incorporate labelled polymers into their cell walls when fed with [(14)C]proline. The non-growing segments incorporated more amino acids into the walls and showed a higher degree of hydroxylation of the proline residues. The proportion of the [(14)C]polymer solubilized by chaotropic or complexing solutes was lower in the non-growing segments, possibly because of enhanced formation of covalent crosslinks between the glycoprotein and other cell wall constituents.The [(14)C]polymer was extracted from the wall by alkali at room temperature after removal of most of the hemicellulose by alkali at 0°, regardless of whether or not the pectic substances were first removed. The alkali does not extract any of the pectic polyuronide. Similar results were obtained with 6 M guanidine thiocyanate, which solubilizes appreciable amounts of the glycoprotein at room temperature and neutral pH without removing pectic substances.The results are considered to indicate a cell wall structure in mung bean hypocotyl tissue in which at least part of the pectin and some of the glycoprotein are not linked covalently together or to other cell wall constituents.
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Affiliation(s)
- R W Bailey
- Fachbereich Biologie, Universität, Pfaffenbergstraße, D-6750, Kaiserslautern, Federal Republic of Germany
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10
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Fincher GB, Sawyer WH, Stone BA. Chemical and physical properties of an arabinogalactan-peptide from wheat endosperm. Biochem J 1974; 139:535-45. [PMID: 4850989 PMCID: PMC1166318 DOI: 10.1042/bj1390535] [Citation(s) in RCA: 129] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
1. An arabinogalactan-peptide from wheat endosperm was studied by using physicochemical techniques and some aspects of its chemical structure were determined. 2. The arabinogalactan-peptide is a non-associating, polydisperse macromolecule ([unk]=22000) which exhibits only minor non-ideal effects in aqueous solution. 3. Examination of the products of partial acid hydrolysis of the polysaccharide component showed that arabinose is present in the alpha-l-arabinofuranosyl configuration, and i.r.-absorption spectroscopy and optical-rotation studies suggest that the d-galactopyranose residues are linked by glycosidic linkages in the beta-anomeric configuration. 4. The arabinogalactan is linked to a peptide which represents 8% (w/w) of the arabinogalactan-peptide and which may be present as a molecular core. Partial degradation of the polymer by successive treatment with oxalic acid and NaOH showed that the linkage between polysaccharide and peptide involves galactose and hydroxyproline residues and is glycosidic in nature. A tentative model is proposed for the structure of the wheat endosperm arabinogalactan-peptide. 5. The subcellular location and function of the arabinogalactan-peptide is discussed in relation to previous work with related molecules.
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Lamport DT. The role of hydroxyproline-rich proteins in the extracellular matrix of plants. THE ... SYMPOSIUM. SOCIETY FOR DEVELOPMENTAL BIOLOGY. SYMPOSIUM 1974; 30:113-30. [PMID: 4600890 DOI: 10.1016/b978-0-12-612973-1.50011-5] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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12
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Allen AK, Neuberger A. The purification and properties of the lectin from potato tubers, a hydroxyproline-containing glycoprotein. Biochem J 1973; 135:307-14. [PMID: 4764264 PMCID: PMC1165824 DOI: 10.1042/bj1350307] [Citation(s) in RCA: 202] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
1. Potato lectin has been purified and shown to be a glycoprotein containing about 50% of carbohydrate. Most of the sugar residues (92%) are arabinose; small amounts of galactose, glucose and glucosamine are also present. 2. The most abundant amino acid is hydroxyproline (16% of the residues), 11.5% of the residues are half-cystine and phenylalanine is absent. The lectin also contains about one residue/molecule of a basic amino acid, not usually found in proteins, which has been tentatively identified as ornithine. There is indirect evidence that the components of the glycoprotein are linked through hydroxyproline and arabinose. 3. By gel filtration in 6m-guanidine-HCl on Sepharose 4B, it was found that both the native glycoprotein and its S-carboxymethylated derivative had subunit molecular weights of 46000 (+/-5000). In a non-denaturing solution, two of these units appear to be associated. 4. The lectin is specifically inhibited in its agglutination reaction by oligosaccharides that contain N-acetylglucosamine. Its specificity is similar to, but not identical with, that of wheat-germ agglutinin.
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Pusztai A, Watt WB. Polyacrylamide gel electrophoresis of proteins in phenol-ethanediol-water (3:2:3, w-v-v) buffers at various pH values. Anal Biochem 1973; 54:58-65. [PMID: 4725674 DOI: 10.1016/0003-2697(73)90247-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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14
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The carbohydrates of the leaves of common barberry (berberis vulgaris). The extraction, fractionation and structural studies of selected non-cellulosic polysaccharides. Carbohydr Res 1972. [DOI: 10.1016/s0008-6215(00)82708-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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15
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Roberts K, Northcote DH. Hydroxyproline: Observations on its chemical and autoradiographical localization in plant cell wall protein. PLANTA 1972; 107:43-51. [PMID: 24477348 DOI: 10.1007/bf00398013] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/1972] [Indexed: 06/03/2023]
Abstract
In sycamore suspension cells both autoradiographical and chemical techniques have confirmed the idea that most of the protein that contains hydroxyproline is located within the cell wall. Relatively more hydroxyproline is incorporated into the walls of stationary phase cells than into those of cells actively engaged in cell division. It is probable that the protein enters the wall during and after the later stages of cell plate consolidation, and this may be facilitated by means of smooth membrane. Distinctive and heavy incorporation of radioactive proline is found associated with unusual wall thickenings or 'warts'.
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Affiliation(s)
- K Roberts
- John Innes Institute, Colney Lane, Norwich, England
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Abstract
1. A glycoprotein containing a large amount of hydroxyproline is present in the cell walls of sycamore callus cells. This protein is insoluble and remained in the alpha-cellulose when a mild separation procedure was used to obtain the polysaccharide fractions of the wall. The glycoprotein contained a high proportion of arabinose and galactose. 2. Soluble glycopeptides were prepared from the alpha-cellulose fraction when peptide bonds were broken by hydrazinolysis. The soluble material was fractionated by gel filtration and one glycopeptide was further purified by electrophoresis; it had a composition of 10% hydroxyproline, 35% arabinose and 55% galactose, and each hydroxyproline residue carried a glycosyl radical so that the oligosaccharides on the glycopeptide had an average degree of polymerization of 9. 3. The extraction of the glycopeptides was achieved without cleavage of glycosyl bonds, so that the glycoprotein cannot act as a covalent cross-link between the major polysaccharides of the wall. 4. The wall protein approximates in conformation to polyhydroxyproline and therefore it probably has similar physicochemical properties to polyhydroxyproline. This is discussed in relation to the function of the glycoprotein and its effect on the physical and chemical nature of the wall.
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Pusztai A, Watt WB. Free-flow electrophoresis of proteins in phenol-containing solvents at various pH values. BIOCHIMICA ET BIOPHYSICA ACTA 1971; 251:158-63. [PMID: 11452380 DOI: 10.1016/0005-2795(71)90098-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
1. Several proteins were found to migrate when subjected to free-flow electrophoresis in buffered phenol-ethanediol-water (3:2:3, w/v/v) solvent mixtures. Mobility of these proteins changed with changing pH (apparent) values of this medium. A pH value of zero mobility for each individual protein could be estimated. 2. Founded on these observations, a high-voltage electrophoresis method in free-flowing buffer films was worked out. The method as presented here was particularly suitable for the separation of proteins on a preparative scale. Application of this and other protein fractionation techniques in dissociating media for the investigation of structural and other insoluble proteins was discussed.
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Affiliation(s)
- A Pusztai
- Rowett Research Institute, Bucksburn, Aberdeen, AB2 9SB, Great Britain
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Pusztai A, Duncan I. Glycoprotein I of Phaseolus vulgaris. Homogeneity and enzymic properties. BIOCHIMICA ET BIOPHYSICA ACTA 1971; 229:785-94. [PMID: 4995314 DOI: 10.1016/0005-2795(71)90297-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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20
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Sadava D, Chrispeels MJ. Hydroxyproline biosynthesis in plant cells. Peptidyl proline hydroxylase from carrot disks. BIOCHIMICA ET BIOPHYSICA ACTA 1971; 227:278-87. [PMID: 5102491 DOI: 10.1016/0005-2744(71)90060-x] [Citation(s) in RCA: 66] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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21
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Laird W, Synge R. Chromatography of plant constituents on crosslinked dextrans in phenol-acetic acid-water mixtures. J Chromatogr A 1971. [DOI: 10.1016/s0021-9673(01)80302-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Kuttan R, Radhakrishnan AN. Studies on bound trans-4-hydroxy-L-proline in sandal (Santalum album L.). Biochem J 1970; 119:651-7. [PMID: 5493503 PMCID: PMC1179450 DOI: 10.1042/bj1190651] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
1. trans-4-Hydroxy-l-proline was found to occur in the bound state in the leaves of sandal (Santalum album L.), in which large amounts of free cis-4-hydroxy-l-proline are also present. 2. Bound trans-4-hydroxy-l-proline was present, associated mainly with a ;wall' fraction and a ;soluble' fraction roughly in equal proportions. 3. Bound proline is present only in small amounts in the ;soluble' fraction but is mostly associated with the ;wall' fraction and the other sedimented fractions. 4. In the free amino acid fraction more than 98% of the hydroxyproline had the cis-configuration, whereas in the ;wall' and ;soluble' fractions more than 90% of the bound hydroxyproline was in the trans-configuration. 5. Various extraction procedures indicated heterogeneity of the hydroxyproline-containing components. Hot 5% (w/v) trichloroacetic acid extracts about 25% of hydroxyproline and m-NaOH extracts an additional 25%. 6. Incorporation of [(14)C]proline into the bound hydroxyproline was demonstrated. The hydroxyproline component of the ;soluble' fraction does not appear to be the precursor of that of the ;wall' fraction.
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Pusztai A, Watt WB. The determination of the molecular size of peptides and proteins by chromatography on bio gel P-100 columns in phenol-acetic acid-water (1:1:1,W-V-V) solvent mixture. BIOCHIMICA ET BIOPHYSICA ACTA 1970; 214:463-7. [PMID: 5509620 DOI: 10.1016/0005-2795(70)90305-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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Pusztai A, Watt WB. Glycoprotein II. The isolation and characterization of a major antigenic and non-haemagglutinating glycoprotein from Phaseolus vulgaris. BIOCHIMICA ET BIOPHYSICA ACTA 1970; 207:413-31. [PMID: 4989124 DOI: 10.1016/s0005-2795(70)80005-8] [Citation(s) in RCA: 98] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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