Purification of vitellogenin mRNA and serum albumin mRNA from avian liver by preparative gel electrophoresis

Isolation of chicken vitellogenin I and III cDNAs and the developmental regulation of five estrogen-responsive genes in the embryonic liver

The isolation of cDNA clones that code for portions of the two minor chicken vitellogenin (VTG) genes (VTGI and VTGIII) is reported. These clones represent unique sequences that are expressed exclusively in the livers of estrogenized birds. In the liver of the egg-laying hen, the levels of RNAs encoding VTGI, VTGII, and VTGIII are approximately 11,000, 30,000, and 3,000 molecules per cell, respectively. We have used the newly isolated clones, as well as the yolk protein cDNAs previously available [VTGII, apolipoprotein II (apoVLDLII), and apolipoprotein B], as probes to examine several aspects of the regulation of these genes by estradiol. First, we demonstrate that the capacity of each gene to respond to estradiol is acquired between 8 and 13 days in ovo. The response of four of these genes to estradiol is diminished during late fetal development, but the responsiveness is recovered within a week after hatching. Second, we demonstrate that these genes display distinct kinetic response profiles following the addition of estradiol. Third, as has been described previously for the VTGII and apoVLDLII genes, we demonstrate that a single injection of estradiol effects a long-term reprogramming event (hepatic memory) that allows a faster onset of the rapid accumulation of both VTGI and VTGIII RNAs following a subsequent rechallenge by estradiol. Collectively, these three sets of data suggest molecular parameters that may contribute to both the coordinate and noncoordinate regulation of this set of genes by estradiol.

Hen vitellogenin genes: a study of the distribution of phosvitin phosphoprotein coding sequences using mRNA hybridization with synthetic complementary oligonucleotide probes

Pentadecamer DNA probes were synthesized, having complementary codons for selected unique pentapeptide sequences of low codon degeneracy present in hen phosvitin minor phosphoprotein, hen phosvitin major phosphoprotein, both phosvitin phosphoproteins. These probes were 5'-32P-labelled. Vitellogenin mRNA was isolated from estrogenized chick liver, fractionated by electrophoresis using formaldehyde/agarose gels and blot transferred to nitrocellulose paper. Relative yields of the two vitellogenin mRNAs differed with the extraction method used. The minor phosphoprotein DNA probe formed a hybrid with a 1.6 megadalton component. The remaining two probes hybridized to a 2.3 megadalton component, this being the expected size of a full-length message. The smallest polyadenylated fragment to which the major phosphoprotein DNA probe hybridized was 1.0 megadalton. The remaining two probes hybridized to fragments of 0.7 megadalton and possibly smaller. Phosvitin major phosphoprotein is concluded to be coded for by part of the larger vitellogenin mRNA, while the minor phosphoprotein is coded for by part of the smaller vitellogenin mRNA. Estimates of the distances of the hybridization sites from polyadenylated tails are also given.

Structure and expression in Escherichia coli of a cloned rat interferon-alpha gene

DNA synthesized by in vitro transcription on rat interferon (IFN) mRNA has been cloned and amplified as recombinant DNA. The nucleotide sequence of these rat IFN cDNA clones revealed i. the partial presence of the coding region of the gene and ii all cDNA clones were derived from the same subtype of rat IFN-alpha mRNA. Purified inserted fragments were used as a hybridisation probe against chromosomal "Southern blots" to show that at least twelve rat IFN-alpha-related sequences are present in the genome. A lambda-linked rat gene library was screened with the cDNA probes, resulting in an equivalent number of rat IFN-alpha-related hybrid phages. By use of a 3'-noncoding region as a probe, the chromosomal counterpart of the cDNA clones could be detected and the nucleotide sequence of its coding region has been determined. Expression of the coding region in E. coli yielded biologically active IFN, when tested for in vitro or in vivo antiviral activity.

Improved method for cloning DNA complementary to minor mRNAs: preparation of a hybridization probe from purified mRNAs encoding intermediate filament proteins

A procedure for the rapid fractionation of mRNA has been used to enrich mRNAs encoding a set of intermediate filament proteins in trophoblastoma cells. The procedure involves sucrose-gradient fractionation followed by high-resolution preparative gel electrophoresis. Part of the enriched mRNA preparation has been used to prepare a hybridization probe to screen a trophoblastoma cDNA library in Escherichia coli. A small proportion of the clones hybridized to the probe, and among these a specific clone was identified.

Comparative study of the physiology of vitellogenesis in Japanese quail

1. During a study of vitellogenesis in the Japanese quail, male or female quail were given, intramuscularly, one to three doses of estradiol-17 beta (16 mumol/100 g body weight). 2. In treated males, the plasma concentrations of protein-bound P (PBP, a measure of the phosphate groups in vitellogenin), Ca, and total protein fluctuated in unison. 3. Packed cell volume (PCV) values varied approx, inversely as the PBP concentrations. 4. Maxima of approx. 0.85 mg PBP/ml occurred six, five, and four days after the primary, secondary, and tertiary injections. Following each maximum, the PBP concentrations declined rapidly to the 0.004 mg/ml level found in the plasma of untreated male quail. 5. During periods of elevated PBP levels, Ca and PBP were present in equimolar quantities. 6. When laying female quail were given a single injection of estradiol, the PBP concentration rose from 0.12 to 0.97 mg/ml. 7. PCV values for both male and female estrogen-treated quail decreased from approx. 0.50 to 0.30. The decreases in PCV values were attributed to increases in plasma volume as measured using 125I-labelled serum albumin. No marked change in total erythrocyte mass was measured using 51CrO2-(4) as the cell label. 8. Perhaps the decrease in plasma serum albumin concentrations reported by some investigators for estrogen-treated animals is due to dilution rather than to repression of serum albumin synthesis.

Isolation and characterization of genomic clones covering the chicken vitellogenin gene

A series of overlapping recombinant clones, which cover the vitellogenin gene, has been isolated from a phage-lambda linked chicken gene library. The DNA of the overlapping clones spans 28 kb of contiguous DNA sequences in the chicken genome. Electron microscopic analysis of hybrids between vitellogenin mRNA and the genomic clones indicates that the chicken vitellogenin gene has a length of approximately 22 kb, about 3.8 times the size of the mRNA. The mRNA sequence is interrupted by at least 33 intervening sequences (introns). Comparison with the vitellogenin gene A2 from Xenopus laevis (Wahli et al., 1980, Cell 20: 107-117) indicates conservation of the number and length of the exons during evolution. Heteroduplex analysis reveals a short stretch of sequence homology between the genes from chicken and frog.

Estradiol-induced vitellogenin synthesis in duck liver

We have studied the induction of vitellogenin by estradiol in duck liver. From the accumulation of vitellogenin in blood plasma we calculated that the rate of vitellogenin synthesis increases linearly with time for about 4 days after estradiol administration. Vitellogenin from chicken and duck cross-react immunologically and their mRNAs show only 7% sequence divergence. We could therefore determine vitellogenin mRNA content of duck liver using chicken vitellogenin cDNA as a hybridization probe. The number of vitellogenin mRNA molecules per hepatocyte increases from less than one in normal duck liver to 18 000 at 4 days after estradiol injection. The rate of vitellogenin synthesis in vivo is roughly proportional to vitellogenin mRNA content, although the data suggest a somewhat enhanced translation of vitellogenin mRNA at later times after hormone administration. Vitellogenin mRNA levels had returned to control values after 4 weeks after hormone administration. In the first 11 h after secondary administration of hormone vitellogenin mRNA accumulates at an only slightly higher rate than is observed after primary hormonal stimulation.

Translation in vivo and in vitro of mRNAs coding for vitellogenin, serum albumin and very-low-density lipoprotein II from chicken liver. A difference in translational efficiency

Characterisation of polysomes from estrogenized chicken liver revealed that very-low-density lipoprotein II (VLDLII), serum albumin and vitellogenin mRNAs are differently packed with ribosomes during translation in vivo. Tne ribosome density per number of nucleotides is high for VLDLII mRNA, intermediate for serum albumin mRNA and low for vitellogenin mRNA. This difference in ribosomal load is maintained throughout the period of hormone effect. The differential utilisation observed for vitellogenin and VLDLII mRNAs partly explains the large difference in molar production rate between these yolk protein precursors. Translation properties and efficiency of the three hepatic mRNAs were also compared in the mRNA-depleted reticulocyte lysate. Elongation of the nascent chains for vitellogenin and serum albumin proceeded in a discontinuous fashion. Initiation in vitro was studied at varying ionic strengths, in the presence of aurintricarboxylic acid, and at suboptimal hemin concentrations. VLDLII mRNA expression is by far the most resistant to 7-methylguanosine 5'-triphosphate (m7GTP) and high salt concentrations, vitellogenin mRNA the least. This behaviour resembles the differential utilisation of the mRNAs in vivo. The putative structural basis of these differences is discussed.

Characterization of cloned complementary DNA covering more than 6000 nucleotides (97%) of avian vitellogenin mRNA

The messenger RNA coding for chicken vitellogenin, a precursor of the egg-yolk proteins lipovitellin and phosvitin, is synthesized in the liver following estrogen injection. This mRNA is 6600 nucleotides long. We have previously reported the cloning and preliminary characterization of some cDNA fragments representing portions of the vitellogenin mRNA [Biochem. Biophys. Acta, 606, 34--46 (1980)]. In this paper we report the full characterization of a larger series of such clones, representing almost the entire length of the mRNA, by restriction endonuclease mapping, R-loop mapping, RNA-DNA hybridization and by translation in vitro of the RNA which hybridizes to the cloned DNA. From the results we conclude that the chicken vitellogenin mRNA, unlike that of Xenopus laevis, does not vary in sequence over most of its length, although some variations in the cDNA sequences were detected particularly in clones derived from the 3' terminus of the RNA. All sequence variants appear to be present in RNA prepared from single animals. The possible origins of these minor species are discussed. Furthermore, we describe a cDNA clone complementary to an mRNA which is about the same size as vitellogenin mRNA and which codes for an egg yolk protein antigenically related to lipovitellin. This mRNA is synthesized constitutively.

Sequences translated by Balbiani ring 75S RNA in vitro are present in giant secretory protein from Chironomus tentans

The 75S RNA originating in the large Balbiani rings 1 and 2 (BRI and 2) was isolated and used for in vitro translation in the mRNA dependent reticulocyte lystate. Conditions (K+-concentration, temperature, time etc). were optimized for obtaining translation products of maximal size. Polypeptide chains up to about 500,000 D were obtained but no complete translation products. Trypic fingerprints were performed on the in vitro products as well as on the secretory protein components nos. I and II+III labelled with 35S-methionine. There was a large degree of correspondence between the fingerprint of the in vitro product and that of component I but less to that of component II+III. The results suggest that 75S RNA with an origin in the BR1 and BR2 codes for the giant secretory protein component I.

Molecular cloning of a human histocompatibility antigen cDNA fragment

A clone (pHLA-1) containing HLA-specific cDNA was constructed by reverse transcription of partially purified HLA mRNA from the human lymphoblastoid cell line LKT. The identity of pHLA-1 was established by its ability to hybridize to HLA heavy chain mRNA and by nucleotide sequence analysis. The pHLA-1 cDNA insert (approximately 525 base pairs) corresponds to the COOH-terminal 46 amino acids of an HLA-A, -B, or -C antigen (15 residues from the hydrophobic region and the remainder from the COOH-termial hydrophilic region), together with a portion of the 3' untranslated region of the mRNA.

Purification of mouse immunoglobulin heavy-chain messenger RNAs from total myeloma tumor RNA

A procedure is described for the large-scale purification of light (L) and heavy (H) chain mRNAs from plasmacytomas produced in mice. Intact RNA is selectively precipitated in high yield from frozen tumors homogenized in 3 M LiCl and 6 M urea. L and H-chain mRNAs were purified by oligo(dT)-cellulose chromatography and either sucrose gradient centrifugation in conditions preventing aggregation or by means of high-resolution preparative gel electrophoresis under non-denaturing conditions. gamma 2a and alpha H-chain mRNAs sedimented as major components at 15.5 S and 16.5 S respectively, when L-chain mRNAs sedimented as 12-S species. H-chain mRNAs isolated by continuous elution during preparative gel electrophoresis were completely separated from both L-chain mRNA and residual 18-S rRNA, and migrated as single components of 1900 +/- 50 nucleotides on analytical denaturing gels. The partially purified H-chain mRNAs were translated into major components of molecular weights of 56,000 (gamma 2a) and 60,000 (alpha) in an mRNA-dependent rabbit reticulocyte lysate, whereas L-chain mRNAs yielded polypeptides of molecular weights of 25,000 (gamma) and 27,000 (chi). Up to 95% of the translation products directed by the purified mRNAs were immunoprecipitated using specific antisera. The purity of L and H-chain mRNAs was assessed by hybridization of corresponding cDNAs with excess recombinant plasmid DNA. The results indicated a minimum purity of 47% (gamma 2a), 62% (alpha), for H-chain mRNAs and 60% (chi), for L-chain mRNAs.

Recombinant plasmids containing avian vitellogenin structural gene sequences derived from complementary DNA

Purified mRNA coding for chicken vitellogenin, a precursor of egg yolk proteins, was transcribed to complementary DNA (cDNAvit) with avian myeloblastosis virus (AMV) reverse transcriptase. Double-stranded cDNA was synthesized with Escherichia coli DNA polymerase I (fragment A) using the self priming ability of the cDNA. Following S1 nuclease digestion the double-stranded cDNA was inserted into the Hind III site of plasmid pBR322 using the poly(dA) . poly(dT) tailing method, and the hybrid molecules were used to transform Escherichia coli chi 1776. Ampicillin-resistant colonies were screened by colony hybridization with 125I-labeled vitellogenen mRNA. Further screening of positive clones was done by agarose gel electrophoresis and in situ hybridization with 125I-labeled vitellogenin mRNA. In addition, plasmid DNA covalently bound to diazotized paper was used to select complementary mRNA sequences. The cloned vitellogenin sequences were shown to hybridize to a mRNA which directs the synthesis of immunoprecipitable vitellogenin when translated in a reticulocyte lysate cell-free system. The length of the inserted cDNA was determined by agarose gel electrophoresis and heteroduplex mapping. The largest insertion was about 2500 base pairs. Restriction mapping indicates that at least three plasmids out of four have different sequences.

Comparison of poly(A)-containing RNAs in different cell types of the lower eukaryote Schizophyllum commune

Poly(A)-containing RNAs were isolated from morphologically different cells of the fungus Schizophyllum commune. Using mRNA markers the number-average length of poly(A)-containing RNA in total RNA and in purified poly(A)-containing RNA was estimated as 1100 nucleotides. Number-average length of poly(A)-tracts was 33 nucleotides. 2.5% of total RNA is poly(A)-containing RNA and probably up to 7.5% are non-polyadenylated polydisperse RNA sequences. Saturation hybridization of poly(A)-containing RNA to gap-translated [3H]DNA resulted in 16% of the reactive single-copy DNA to become S1 nuclease resistant. It was found that purified poly(A)-containing RNA represented the entire RNA complexity, i.e. 10 000 different RNA sequences in S. commune. RNA sequences isolated from morphologically different mycelia and from fruiting and non-fruiting mycelia were identical for at least 90%.