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Ghosh R, León-Ruiz M, Dubey S, Benito-León J. The first case report of spinocerebellar ataxia type-40 in India: novel phenotypic and radiological (bilateral olivary degeneration) features and a comprehensive review of this remarkable radiological sign. Neurol Sci 2022; 43:5111-5117. [DOI: 10.1007/s10072-022-06095-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Accepted: 04/20/2022] [Indexed: 11/29/2022]
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Kachlishvili K, Korneev A, Maisuradze L, Liu J, Scheraga HA, Molochkov A, Senet P, Niemi AJ, Maisuradze GG. New Insights into Folding, Misfolding, and Nonfolding Dynamics of a WW Domain. J Phys Chem B 2020; 124:3855-3872. [PMID: 32271570 DOI: 10.1021/acs.jpcb.0c00628] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
Intermediate states in protein folding are associated with formation of amyloid fibrils, which are responsible for a number of neurodegenerative diseases. Therefore, prevention of the aggregation of folding intermediates is one of the most important problems to overcome. Recently, we studied the origins and prevention of formation of intermediate states with the example of the Formin binding protein 28 (FBP28) WW domain. We demonstrated that the replacement of Leu26 by Asp26 or Trp26 (in ∼15% of the folding trajectories) can alter the folding scenario from three-state folding, a major folding scenario for the FBP28 WW domain (WT) and its mutants, toward two-state or downhill folding at temperatures below the melting point. Here, for a better understanding of the physics of the formation/elimination of intermediates, (i) the dynamics and energetics of formation of β-strands in folding, misfolding, and nonfolding trajectories of these mutants (L26D and L26W) is investigated; (ii) the experimental structures of WT, L26D, and L26W are analyzed in terms of a kink (heteroclinic standing wave solution) of a generalized discrete nonlinear Schrödinger equation. We show that the formation of each β-strand in folding trajectories is accompanied by the emergence of kinks in internal coordinate space as well as a decrease in local free energy. In particular, the decrease in downhill folding trajectory is ∼7 kcal/mol, while it varies between 31 and 48 kcal/mol for the three-state folding trajectory. The kink analyses of the experimental structures give new insights into formation of intermediates, which may become a useful tool for preventing aggregation.
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Affiliation(s)
- Khatuna Kachlishvili
- Baker Laboratory of Chemistry and Chemical Biology, Cornell University, Ithaca 14853-1301, New York, United States
| | - Anatolii Korneev
- Laboratory of Physics of Living Matter, Far Eastern Federal University, Sukhanova 8, Vladivostok 690950, Russia
| | - Luka Maisuradze
- Baker Laboratory of Chemistry and Chemical Biology, Cornell University, Ithaca 14853-1301, New York, United States.,Biochemistry, Quantitative Biology, Biophysics, and Structural Biology (BQBS) Track, Yale University, New Haven 06520-8084, ConnecticutUnited States
| | - Jiaojiao Liu
- School of Physics, Beijing Institute of Technology, Beijing 100081, P. R. China
| | - Harold A Scheraga
- Baker Laboratory of Chemistry and Chemical Biology, Cornell University, Ithaca 14853-1301, New York, United States
| | - Alexander Molochkov
- Laboratory of Physics of Living Matter, Far Eastern Federal University, Sukhanova 8, Vladivostok 690950, Russia
| | - Patrick Senet
- Baker Laboratory of Chemistry and Chemical Biology, Cornell University, Ithaca 14853-1301, New York, United States.,Laboratoire Interdisciplinaire Carnot de Bourgogne, UMR 6303 CNRS-Univ. de Bourgogne Franche-Comté, 9 Av. A. Savary, BP 47 870, Dijon Cedex F-21078, France
| | - Antti J Niemi
- Laboratory of Physics of Living Matter, Far Eastern Federal University, Sukhanova 8, Vladivostok 690950, Russia.,School of Physics, Beijing Institute of Technology, Beijing 100081, P. R. China.,Laboratoire de Mathematiques et Physique Theorique CNRS UMR 6083, Fédération Denis Poisson, Université de Tours, Parc de Grandmont, Tours F37200, France.,Nordita, Stockholm University, Roslagstullsbacken 23, Stockholm SE-106 91, Sweden
| | - Gia G Maisuradze
- Baker Laboratory of Chemistry and Chemical Biology, Cornell University, Ithaca 14853-1301, New York, United States
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Hayashi Y, Iwasaki Y, Waza M, Shibata H, Akagi A, Kimura A, Inuzuka T, Satoh K, Kitamoto T, Yoshida M, Shimohata T. Clinicopathological findings of an MM2-cortical-type sporadic Creutzfeldt-Jakob disease patient with cortical blindness during a course of glaucoma and age-related macular degeneration. Prion 2020; 13:124-131. [PMID: 31219399 PMCID: PMC6629179 DOI: 10.1080/19336896.2019.1631680] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Here, we report an autopsy-verified patient with MM2-coritical-type sporadic Creutzfeldt-Jakob disease (MM2C-type sCJD) presenting cortical blindness during a course of glaucoma and age-related macular degeneration, and focus on the difficulties involved in early clinical diagnosis. An 83-year-old man was admitted to our hospital 15 months after the onset of cortical blindness, and 9 months after the onset of progressive dementia. Neurological examination revealed dementia, frontal signs, visual disturbance, dysphagia, myoclonus and exaggerated tendon reflexes in the four extremities. Diffusion-weighted MRI (DW-MRI) showed cortical hyperintensities predominantly in the bilateral occipital lobes. PRNP gene analysis showed no mutations with methionine homozygosity at codon 129. Cerebrospinal fluid (CSF) examination revealed elevation of 14–3-3 and total tau protein. The symptoms progressed gradually, and the patient died of aspiration pneumonia, 30 months after the onset. Neuropathological examination revealed extensive large confluent vacuole-type spongiform changes in the cerebral cortices. Prion protein (PrP) immunostaining showed perivascular and plaque-type PrP deposits. We diagnosed our patient as MM2C-type sCJD. There are two difficulties in the early clinical diagnosis of MM2C-type sCJD with ocular disease in the elderly; delayed utilization of DW-MRI, and accompaniment of ocular disease. For early diagnosis of MM2C-type sCJD, we conclude that clinician should perform DW-MRI for patients with isolated dementia or cortical visual disturbance.
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Affiliation(s)
- Yuichi Hayashi
- a Department of Neurology , Gifu University Graduate School of Medicine , Gifu , Japan
| | - Yasushi Iwasaki
- b Autopsy Center of Prion Disease , Institute for Medical Sciences of Aging, Aichi Medical University , Nagakute , Japan
| | - Masahiro Waza
- c Department of Neurology , Kakamigahara Rehabilitation Hospital , Kakamigahara , Japan
| | - Hideaki Shibata
- a Department of Neurology , Gifu University Graduate School of Medicine , Gifu , Japan
| | - Akio Akagi
- b Autopsy Center of Prion Disease , Institute for Medical Sciences of Aging, Aichi Medical University , Nagakute , Japan
| | - Akio Kimura
- a Department of Neurology , Gifu University Graduate School of Medicine , Gifu , Japan
| | - Takashi Inuzuka
- a Department of Neurology , Gifu University Graduate School of Medicine , Gifu , Japan.,d Department of Neurology , Gifu Municipal Hospital , Gifu , Japan
| | - Katsuya Satoh
- e Department of Locomotive Rehabilitation Sciences , Nagasaki University Graduate School of Medicine , Nagasaki , Japan
| | - Tetsuyuki Kitamoto
- f Division of CJD Science and Technology, Department of Prion Research , Center for Translational and Advanced Animal Research on Human Diseases, Tohoku University School of Medicine , Sendai , Japan
| | - Mari Yoshida
- b Autopsy Center of Prion Disease , Institute for Medical Sciences of Aging, Aichi Medical University , Nagakute , Japan
| | - Takayoshi Shimohata
- a Department of Neurology , Gifu University Graduate School of Medicine , Gifu , Japan
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