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Pandanaboina SC, RanguMagar AB, Sharma KD, Chhetri BP, Parnell CM, Xie JY, Srivatsan M, Ghosh A. Functionalized Nanocellulose Drives Neural Stem Cells toward Neuronal Differentiation. J Funct Biomater 2021; 12:64. [PMID: 34842752 PMCID: PMC8628960 DOI: 10.3390/jfb12040064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Revised: 11/10/2021] [Accepted: 11/13/2021] [Indexed: 11/23/2022] Open
Abstract
Transplantation of differentiated and fully functional neurons may be a better therapeutic option for the cure of neurodegenerative disorders and brain injuries than direct grafting of neural stem cells (NSCs) that are potentially tumorigenic. However, the differentiation of NSCs into a large population of neurons has been a challenge. Nanomaterials have been widely used as substrates to manipulate cell behavior due to their nano-size, excellent physicochemical properties, ease of synthesis, and versatility in surface functionalization. Nanomaterial-based scaffolds and synthetic polymers have been fabricated with topology resembling the micro-environment of the extracellular matrix. Nanocellulose materials are gaining attention because of their availability, biocompatibility, biodegradability and bioactivity, and affordable cost. We evaluated the role of nanocellulose with different linkage and surface features in promoting neuronal differentiation. Nanocellulose coupled with lysine molecules (CNC-Lys) provided positive charges that helped the cells to attach. Embryonic rat NSCs were differentiated on the CNC-Lys surface for up to three weeks. By the end of the three weeks of in vitro culture, 87% of the cells had attached to the CNC-Lys surface and more than half of the NSCs had differentiated into functional neurons, expressing endogenous glutamate, generating electrical activity and action potentials recorded by the multi-electrode array.
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Affiliation(s)
- Sahitya Chetan Pandanaboina
- Department of Biological Sciences and Arkansas Biosciences Institute, Arkansas State University, Jonesboro, AR 72401, USA; (S.C.P.); (K.D.S.)
| | - Ambar B. RanguMagar
- Department of Chemistry, University of Arkansas at Little Rock, Little Rock, AR 72204, USA; (A.B.R.); (B.P.C.); (C.M.P.)
| | - Krishna D. Sharma
- Department of Biological Sciences and Arkansas Biosciences Institute, Arkansas State University, Jonesboro, AR 72401, USA; (S.C.P.); (K.D.S.)
| | - Bijay P. Chhetri
- Department of Chemistry, University of Arkansas at Little Rock, Little Rock, AR 72204, USA; (A.B.R.); (B.P.C.); (C.M.P.)
| | - Charlette M. Parnell
- Department of Chemistry, University of Arkansas at Little Rock, Little Rock, AR 72204, USA; (A.B.R.); (B.P.C.); (C.M.P.)
| | - Jennifer Yanhua Xie
- Department of Basic Sciences, New York Institute of Technology College of Osteopathic Medicine, Arkansas State University, Jonesboro, AR 72401, USA
| | - Malathi Srivatsan
- Department of Biological Sciences and Arkansas Biosciences Institute, Arkansas State University, Jonesboro, AR 72401, USA; (S.C.P.); (K.D.S.)
| | - Anindya Ghosh
- Department of Chemistry, University of Arkansas at Little Rock, Little Rock, AR 72204, USA; (A.B.R.); (B.P.C.); (C.M.P.)
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Vakilna YS, Tang WC, Wheeler BC, Brewer GJ. The Flow of Axonal Information Among Hippocampal Subregions: 1. Feed-Forward and Feedback Network Spatial Dynamics Underpinning Emergent Information Processing. Front Neural Circuits 2021; 15:660837. [PMID: 34512275 PMCID: PMC8430040 DOI: 10.3389/fncir.2021.660837] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 08/03/2021] [Indexed: 11/21/2022] Open
Abstract
The tri-synaptic pathway in the mammalian hippocampus enables cognitive learning and memory. Despite decades of reports on anatomy and physiology, the functional architecture of the hippocampal network remains poorly understood in terms of the dynamics of axonal information transfer between subregions. Information inputs largely flow from the entorhinal cortex (EC) to the dentate gyrus (DG), and then are processed further in the CA3 and CA1 before returning to the EC. Here, we reconstructed elements of the rat hippocampus in a novel device over an electrode array that allowed for monitoring the directionality of individual axons between the subregions. The direction of spike propagation was determined by the transmission delay of the axons recorded between two electrodes in microfluidic tunnels. The majority of axons from the EC to the DG operated in the feed-forward direction, with other regions developing unexpectedly large proportions of feedback axons to balance excitation. Spike timing in axons between each region followed single exponential log-log distributions over two orders of magnitude from 0.01 to 1 s, indicating that conventional descriptors of mean firing rates are misleading assumptions. Most of the spiking occurred in bursts that required two exponentials to fit the distribution of inter-burst intervals. This suggested the presence of up-states and down-states in every region, with the least up-states in the DG to CA3 feed-forward axons and the CA3 subregion. The peaks of the log-normal distributions of intra-burst spike rates were similar in axons between regions with modes around 95 Hz distributed over an order of magnitude. Burst durations were also log-normally distributed around a peak of 88 ms over two orders of magnitude. Despite the diversity of these spike distributions, spike rates from individual axons were often linearly correlated to subregions. These linear relationships enabled the generation of structural connectivity graphs, not possible previously without the directional flow of axonal information. The rich axonal spike dynamics between subregions of the hippocampus reveal both constraints and broad emergent dynamics of hippocampal architecture. Knowledge of this network architecture may enable more efficient computational artificial intelligence (AI) networks, neuromorphic hardware, and stimulation and decoding from cognitive implants.
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Affiliation(s)
- Yash S Vakilna
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA, United States
| | - William C Tang
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA, United States
| | - Bruce C Wheeler
- Department of Bioengineering, University of California, San Diego, San Diego, CA, United States
| | - Gregory J Brewer
- Department of Biomedical Engineering, University of California, Irvine, Irvine, CA, United States.,Center for Neuroscience of Learning and Memory, Memory Impairments and Neurological Disorders (MIND) Institute, University of California, Irvine, Irvine, CA, United States
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Huang YT, Chang YL, Chen CC, Lai PY, Chan CK. Positive feedback and synchronized bursts in neuronal cultures. PLoS One 2017; 12:e0187276. [PMID: 29091966 PMCID: PMC5665536 DOI: 10.1371/journal.pone.0187276] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2016] [Accepted: 10/17/2017] [Indexed: 01/05/2023] Open
Abstract
Synchronized bursts (SBs) with complex structures are common in neuronal cultures. Although the phenomenon of SBs has been discovered for a long time, its origin is still unclear. Here, we investigate the properties of these SBs in cultures grown on a multi-electrode array. We find that structures of these SBs are related to the different developmental stages of the cultures and these structures can be modified by changing the magnesium concentration in the culture medium; indicating that synaptic mechanism is involved in the generation of SBs. A model based on short term synaptic plasticity (STSP), recurrent connections and astrocytic recycling of neurotransmitters has been developed successfully to understand the observed structures of SBs in experiments. A phase diagram obtained from this model shows that networks exhibiting SBs are in a complex oscillatory state due to large enough positive feedback provided by synaptic facilitation and recurrent connections. In this model, while STSP controls the fast oscillations (∼ 100 ms) within a SB, the astrocytic recycling determines the slow time scale (∼10 s) of inter-burst intervals. Our study suggests that glia-neuron interactions can be important in the understanding of the complex dynamics of neuronal networks.
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Affiliation(s)
- Yu-Ting Huang
- Dept. of Physics and Center for Complex Systems, National Central University, Chungli, Taiwan 320, ROC
- Institute of Physics, Academia Sinica, Nankang, Taipei, Taiwan 115, ROC
| | - Yu-Lin Chang
- Institute of Physics, Academia Sinica, Nankang, Taipei, Taiwan 115, ROC
| | - Chun-Chung Chen
- Institute of Physics, Academia Sinica, Nankang, Taipei, Taiwan 115, ROC
| | - Pik-Yin Lai
- Dept. of Physics and Center for Complex Systems, National Central University, Chungli, Taiwan 320, ROC
- * E-mail: (PYL); (CKC)
| | - C. K. Chan
- Dept. of Physics and Center for Complex Systems, National Central University, Chungli, Taiwan 320, ROC
- Institute of Physics, Academia Sinica, Nankang, Taipei, Taiwan 115, ROC
- * E-mail: (PYL); (CKC)
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4
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Jenkinson SP, Grandgirard D, Heidemann M, Tscherter A, Avondet MA, Leib SL. Embryonic Stem Cell-Derived Neurons Grown on Multi-Electrode Arrays as a Novel In vitro Bioassay for the Detection of Clostridium botulinum Neurotoxins. Front Pharmacol 2017; 8:73. [PMID: 28280466 PMCID: PMC5322221 DOI: 10.3389/fphar.2017.00073] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2016] [Accepted: 02/06/2017] [Indexed: 12/01/2022] Open
Abstract
Clostridium botulinum neurotoxins (BoNTs) are the most poisonous naturally occurring protein toxins known to mankind and are the causative agents of the severe and potentially life-threatening disease botulism. They are also known for their application as cosmetics and as unique bio-pharmaceuticals to treat an increasing number of neurological and non-neurological disorders. Currently, the potency of biologically active BoNT for therapeutic use is mainly monitored by the murine LD50-assay, an ethically disputable test causing suffering and death of a considerable number of mice. The aim of this study was to establish an in vitro assay as an alternative to the widely used in vivo mouse bioassay. We report a novel BoNT detection assay using mouse embryonic stem cell-derived neurons (mESN) cultured on multi-electrode arrays (MEAs). After 21 days in culture, the mESN formed a neuronal network showing spontaneous bursting activity based on functional synapses and express the necessary target proteins for BoNTs. Treating cultures for 6 h with 16.6 pM of BoNT serotype A and incubation with 1.66 pM BoNT/A or 33 Units/ml of Botox® for 24 h lead to a significant reduction of both spontaneous network bursts and average spike rate. This data suggests that mESN cultured on MEAs pose a novel, biologically relevant model that can be used to detect and quantify functional BoNT effects, thus accelerating BoNT research while decreasing animal use.
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Affiliation(s)
- Stephen P Jenkinson
- Neuroinfection Laboratory, Institute for Infectious Diseases, University of BernBern, Switzerland; Biology Division, Spiez Laboratory, Swiss Federal Office for Civil ProtectionSpiez, Switzerland; Cluster for Regenerative Neuroscience, Department for Clinical Research, University of BernBern, Switzerland; Graduate School for Cellular and Biomedical Sciences, University of BernBern, Switzerland
| | - Denis Grandgirard
- Neuroinfection Laboratory, Institute for Infectious Diseases, University of BernBern, Switzerland; Cluster for Regenerative Neuroscience, Department for Clinical Research, University of BernBern, Switzerland
| | | | - Anne Tscherter
- Department of Physiology, University of Bern Bern, Switzerland
| | - Marc-André Avondet
- Biology Division, Spiez Laboratory, Swiss Federal Office for Civil Protection Spiez, Switzerland
| | - Stephen L Leib
- Neuroinfection Laboratory, Institute for Infectious Diseases, University of BernBern, Switzerland; Cluster for Regenerative Neuroscience, Department for Clinical Research, University of BernBern, Switzerland
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Huang CH, Huang YT, Chen CC, Chan CK. Propagation and synchronization of reverberatory bursts in developing cultured networks. J Comput Neurosci 2016; 42:177-185. [PMID: 27942935 DOI: 10.1007/s10827-016-0634-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2016] [Revised: 11/14/2016] [Accepted: 11/21/2016] [Indexed: 11/30/2022]
Abstract
Developing networks of neural systems can exhibit spontaneous, synchronous activities called neural bursts, which can be important in the organization of functional neural circuits. Before the network matures, the activity level of a burst can reverberate in repeated rise-and-falls in periods of hundreds of milliseconds following an initial wave-like propagation of spiking activity, while the burst itself lasts for seconds. To investigate the spatiotemporal structure of the reverberatory bursts, we culture dissociated, rat cortical neurons on a high-density multi-electrode array to record the dynamics of neural activity over the growth and maturation of the network. We find the synchrony of the spiking significantly reduced following the initial wave and the activities become broadly distributed spatially. The synchrony recovers as the system reverberates until the end of the burst. Using a propagation model we infer the spreading speed of the spiking activity, which increases as the culture ages. We perform computer simulations of the system using a physiological model of spiking networks in two spatial dimensions and find the parameters that reproduce the observed resynchronization of spiking in the bursts. An analysis of the simulated dynamics suggests that the depletion of synaptic resources causes the resynchronization. The spatial propagation dynamics of the simulations match well with observations over the course of a burst and point to an interplay of the synaptic efficacy and the noisy neural self-activation in producing the morphology of the bursts.
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Affiliation(s)
- Chih-Hsu Huang
- Institute of Physics, Academia Sinica, Nangang, Taipei, Taiwan, 115, Republic of China
| | - Yu-Ting Huang
- Institute of Physics, Academia Sinica, Nangang, Taipei, Taiwan, 115, Republic of China.,Department of Physics and Center for Complex Systems, National Central University, Chungli, Taiwan, 320, Republic of China
| | - Chun-Chung Chen
- Institute of Physics, Academia Sinica, Nangang, Taipei, Taiwan, 115, Republic of China.
| | - C K Chan
- Institute of Physics, Academia Sinica, Nangang, Taipei, Taiwan, 115, Republic of China.,Department of Physics and Center for Complex Systems, National Central University, Chungli, Taiwan, 320, Republic of China
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Douw L, DeSalvo MN, Tanaka N, Cole AJ, Liu H, Reinsberger C, Stufflebeam SM. Dissociated multimodal hubs and seizures in temporal lobe epilepsy. Ann Clin Transl Neurol 2015; 2:338-52. [PMID: 25909080 PMCID: PMC4402080 DOI: 10.1002/acn3.173] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2014] [Revised: 12/22/2014] [Accepted: 12/22/2014] [Indexed: 11/16/2022] Open
Abstract
Objective Brain connectivity at rest is altered in temporal lobe epilepsy (TLE), particularly in “hub” areas such as the posterior default mode network (DMN). Although both functional and anatomical connectivity are disturbed in TLE, the relationships between measures as well as to seizure frequency remain unclear. We aim to clarify these associations using connectivity measures specifically sensitive to hubs. Methods Connectivity between 1000 cortical surface parcels was determined in 49 TLE patients and 23 controls with diffusion and resting-state functional magnetic resonance imaging. Two types of hub connectivity were investigated across multiple brain modules (the DMN, motor system, etcetera): (1) within-module connectivity (a measure of local importance that assesses a parcel's communication level within its own subnetwork) and (2) between-module connectivity (a measure that assesses connections across multiple modules). Results In TLE patients, there was lower overall functional integrity of the DMN as well as an increase in posterior hub connections with other modules. Anatomical between-module connectivity was globally decreased. Higher DMN disintegration (DD) coincided with higher anatomical between-module connectivity, whereas both were associated with increased seizure frequency. DD related to seizure frequency through mediating effects of anatomical connectivity, but seizure frequency also correlated with anatomical connectivity through DD, indicating a complex interaction between multimodal networks and symptoms. Interpretation We provide evidence for dissociated anatomical and functional hub connectivity in TLE. Moreover, shifts in functional hub connections from within to outside the DMN, an overall loss of integrative anatomical communication, and the interaction between the two increase seizure frequency.
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Affiliation(s)
- Linda Douw
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital Charlestown, Massachusetts ; Department of Radiology, Harvard Medical School Boston, Massachusetts ; Department of Anatomy and Neurosciences, VU University Medical Center Amsterdam, The Netherlands
| | - Matthew N DeSalvo
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital Charlestown, Massachusetts ; Department of Radiology, Harvard Medical School Boston, Massachusetts
| | - Naoaki Tanaka
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital Charlestown, Massachusetts ; Department of Radiology, Harvard Medical School Boston, Massachusetts
| | - Andrew J Cole
- Department of Neurology, Massachusetts General Hospital Boston, Massachusetts
| | - Hesheng Liu
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital Charlestown, Massachusetts ; Department of Radiology, Harvard Medical School Boston, Massachusetts
| | - Claus Reinsberger
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital Charlestown, Massachusetts ; Department of Neurology, Brigham and Women's Hospital Boston, Massachusetts
| | - Steven M Stufflebeam
- Department of Radiology, Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital Charlestown, Massachusetts ; Department of Radiology, Harvard Medical School Boston, Massachusetts
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Functional regeneration of intraspinal connections in a new in vitro model. Neuroscience 2014; 262:40-52. [PMID: 24394955 DOI: 10.1016/j.neuroscience.2013.12.051] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2013] [Revised: 11/29/2013] [Accepted: 12/23/2013] [Indexed: 11/21/2022]
Abstract
Regeneration in the adult mammalian spinal cord is limited due to intrinsic properties of mature neurons and a hostile environment, mainly provided by central nervous system myelin and reactive astrocytes. Recent results indicate that propriospinal connections are a promising target for intervention to improve functional recovery. To study this functional regeneration in vitro we developed a model consisting of two organotypic spinal cord slices placed adjacently on multi-electrode arrays. The electrodes allow us to record the spontaneously occurring neuronal activity, which is often organized in network bursts. Within a few days in vitro (DIV), these bursts become synchronized between the two slices due to the formation of axonal connections. We cut them with a scalpel at different time points in vitro and record the neuronal activity 3 weeks later. The functional recovery ability was assessed by calculating the percentage of synchronized bursts between the two slices. We found that cultures lesioned at a young age (7-9 DIV) retained the high regeneration ability of embryonic tissue. However, cultures lesioned at older ages (>19 DIV) displayed a distinct reduction of synchronized activity. This reduction was not accompanied by an inability for axons to cross the lesion site. We show that functional regeneration in these old cultures can be improved by increasing the intracellular cAMP level with Rolipram or by placing a young slice next to an old one directly after the lesion. We conclude that co-cultures of two spinal cord slices are an appropriate model to study functional regeneration of intraspinal connections.
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Brewer GJ, Boehler MD, Leondopulos S, Pan L, Alagapan S, DeMarse TB, Wheeler BC. Toward a self-wired active reconstruction of the hippocampal trisynaptic loop: DG-CA3. Front Neural Circuits 2013; 7:165. [PMID: 24155693 PMCID: PMC3800815 DOI: 10.3389/fncir.2013.00165] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2013] [Accepted: 09/23/2013] [Indexed: 01/08/2023] Open
Abstract
The mammalian hippocampus functions to encode and retrieve memories by transiently changing synaptic strengths, yet encoding in individual subregions for transmission between regions remains poorly understood. Toward the goal of better understanding the coding in the trisynaptic pathway from the dentate gyrus (DG) to the CA3 and CA1, we report a novel microfabricated device that divides a micro-electrode array into two compartments of separate hippocampal network subregions connected by axons that grow through 3 × 10 × 400 μm tunnels. Gene expression by qPCR demonstrated selective enrichment of separate DG, CA3, and CA1 subregions. Reconnection of DG to CA3 altered burst dynamics associated with marked enrichment of GAD67 in DG and GFAP in CA3. Surprisingly, DG axon spike propagation was preferentially unidirectional to the CA3 region at 0.5 m/s with little reverse transmission. Therefore, select hippocampal subregions intrinsically self-wire in anatomically appropriate patterns and maintain their distinct subregion phenotype without external inputs.
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Affiliation(s)
- Gregory J Brewer
- Department of Medical Microbiology, Immunology and Cell Biology, Southern Illinois University School of Medicine Springfield, IL, USA ; Department of Neurology, Southern Illinois University School of Medicine Springfield, IL, USA
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Razik DS, Hawellek DJ, Antkowiak B, Hentschke H. Impairment of GABA transporter GAT-1 terminates cortical recurrent network activity via enhanced phasic inhibition. Front Neural Circuits 2013; 7:141. [PMID: 24062646 PMCID: PMC3769619 DOI: 10.3389/fncir.2013.00141] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2013] [Accepted: 08/23/2013] [Indexed: 11/13/2022] Open
Abstract
In the central nervous system, GABA transporters (GATs) very efficiently clear synaptically released GABA from the extracellular space, and thus exert a tight control on GABAergic inhibition. In neocortex, GABAergic inhibition is heavily recruited during recurrent phases of spontaneous action potential activity which alternate with neuronally quiet periods. Therefore, such activity should be quite sensitive to minute alterations of GAT function. Here, we explored the effects of a gradual impairment of GAT-1 and GAT-2/3 on spontaneous recurrent network activity – termed network bursts and silent periods – in organotypic slice cultures of rat neocortex. The GAT-1 specific antagonist NO-711 depressed activity already at nanomolar concentrations (IC50 for depression of spontaneous multiunit firing rate of 42 nM), reaching a level of 80% at 500–1000 nM. By contrast, the GAT-2/3 preferring antagonist SNAP-5114 had weaker and less consistent effects. Several lines of evidence pointed toward an enhancement of phasic GABAergic inhibition as the dominant activity-depressing mechanism: network bursts were drastically shortened, phasic GABAergic currents decayed slower, and neuronal excitability during ongoing activity was diminished. In silent periods, NO-711 had little effect on neuronal excitability or membrane resistance, quite in contrast to the effects of muscimol, a GABA mimetic which activates GABAA receptors tonically. Our results suggest that an enhancement of phasic GABAergic inhibition efficiently curtails cortical recurrent activity and may mediate antiepileptic effects of therapeutically relevant concentrations of GAT-1 antagonists.
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Affiliation(s)
- Daniel S Razik
- Experimental Anesthesiology Section, Department of Anesthesiology, University Hospital of Tübingen Tübingen, Germany
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Local MEG networks: the missing link between protein expression and epilepsy in glioma patients? Neuroimage 2013; 75:195-203. [PMID: 23507380 DOI: 10.1016/j.neuroimage.2013.02.067] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2012] [Revised: 01/28/2013] [Accepted: 02/27/2013] [Indexed: 01/21/2023] Open
Abstract
Connectivity and network analysis in neuroscience has been applied to multiple spatial scales, but the links between these different scales have rarely been investigated. In tumor-related epilepsy, altered network topology is related to behavior, but the molecular basis of these observations is unknown. We elucidate the associations between microscopic features of brain tumors, local network topology, and functional patient status. We hypothesize that expression of proteins related to tumor-related epilepsy is directly correlated with network characteristics of the tumor area. Glioma patients underwent magnetoencephalography, and functional network topology of the tumor area was used to predict tissue protein expression patterns of tumor tissue collected during neurosurgery. Protein expression and network topology were interdependent; in particular between-module connectivity was selectively associated with two epilepsy-related proteins. Total number of seizures was related to both the role of the tumor area in the functional network and to protein expression. Importantly, classification of protein expression was predicted by between-module connectivity with up to 100% accuracy. Thus, network topology may serve as an intermediate level between molecular features of tumor tissue and symptomatology in brain tumor patients, and can potentially be used as a non-invasive marker for microscopic tissue characteristics.
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