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For: Chow CET, Fuhrman JA. Seasonality and monthly dynamics of marine myovirus communities. Environ Microbiol 2012;14:2171-83. [PMID: 22507260 DOI: 10.1111/j.1462-2920.2012.02744.x] [Citation(s) in RCA: 50] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Number Cited by Other Article(s)
1
Laperriere SM, Minch B, Weissman JL, Hou S, Yeh YC, Ignacio-Espinoza JC, Ahlgren NA, Moniruzzaman M, Fuhrman JA. Phylogenetic proximity drives temporal succession of marine giant viruses in a five-year metagenomic time-series. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.08.12.607631. [PMID: 39185240 PMCID: PMC11343133 DOI: 10.1101/2024.08.12.607631] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 08/27/2024]
2
Li H, Cai L, Wang L, Wang Y, Xu J, Zhang R. The structure and assembly mechanisms of T4-like cyanophages community in the South China Sea. Microbiol Spectr 2024;12:e0200223. [PMID: 38193726 PMCID: PMC10846272 DOI: 10.1128/spectrum.02002-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Accepted: 11/27/2023] [Indexed: 01/10/2024]  Open
3
Rodríguez-Ramos J, Oliverio A, Borton MA, Danczak R, Mueller BM, Schulz H, Ellenbogen J, Flynn RM, Daly RA, Schopflin L, Shaffer M, Goldman A, Lewandowski J, Stegen JC, Wrighton KC. Spatial and temporal metagenomics of river compartments reveals viral community dynamics in an urban impacted stream. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.04.04.535500. [PMID: 37066413 PMCID: PMC10104031 DOI: 10.1101/2023.04.04.535500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/18/2023]
4
Prevalence of Viral Frequency-Dependent Infection in Coastal Marine Prokaryotes Revealed Using Monthly Time Series Virome Analysis. mSystems 2023;8:e0093122. [PMID: 36722950 PMCID: PMC9948707 DOI: 10.1128/msystems.00931-22] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]  Open
5
Dart E, Fuhrman JA, Ahlgren NA. Diverse Marine T4-like Cyanophage Communities Are Primarily Comprised of Low-Abundance Species Including Species with Distinct Seasonal, Persistent, Occasional, or Sporadic Dynamics. Viruses 2023;15:v15020581. [PMID: 36851794 PMCID: PMC9960396 DOI: 10.3390/v15020581] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Revised: 02/16/2023] [Accepted: 02/17/2023] [Indexed: 02/22/2023]  Open
6
Langlois V, Girard C, Vincent WF, Culley AI. A Tale of Two Seasons: Distinct Seasonal Viral Communities in a Thermokarst Lake. Microorganisms 2023;11:microorganisms11020428. [PMID: 36838393 PMCID: PMC9964402 DOI: 10.3390/microorganisms11020428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Revised: 02/03/2023] [Accepted: 02/03/2023] [Indexed: 02/11/2023]  Open
7
Effects of phytoplankton, viral communities, and warming on free-living and particle-associated marine prokaryotic community structure. Nat Commun 2022;13:7905. [PMID: 36550140 PMCID: PMC9780322 DOI: 10.1038/s41467-022-35551-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Accepted: 12/09/2022] [Indexed: 12/24/2022]  Open
8
Isolation, characterization, and comparative genomic analysis of vB_PlaM_Pd22F, a new bacteriophage of the family Myoviridae. Arch Virol 2022;167:1269-1284. [PMID: 35366103 DOI: 10.1007/s00705-022-05429-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2021] [Accepted: 01/26/2022] [Indexed: 11/02/2022]
9
Bekliz M, Pramateftaki P, Battin TJ, Peter H. Viral diversity is linked to bacterial community composition in alpine stream biofilms. ISME COMMUNICATIONS 2022;2:27. [PMID: 37938299 PMCID: PMC9723757 DOI: 10.1038/s43705-022-00112-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Revised: 02/21/2022] [Accepted: 03/01/2022] [Indexed: 06/03/2023]
10
Prodinger F, Endo H, Takano Y, Li Y, Tominaga K, Isozaki T, Blanc-Mathieu R, Gotoh Y, Hayashi T, Taniguchi E, Nagasaki K, Yoshida T, Ogata H. Year-round dynamics of amplicon sequence variant communities differ among eukaryotes, Imitervirales, and prokaryotes in a coastal ecosystem. FEMS Microbiol Ecol 2021;97:6486443. [PMID: 34962982 DOI: 10.1093/femsec/fiab167] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2021] [Accepted: 12/25/2021] [Indexed: 11/13/2022]  Open
11
Role of Phylogenetic Structure in the Dynamics of Coastal Viral Assemblages. Appl Environ Microbiol 2021;87:AEM.02704-20. [PMID: 33741635 DOI: 10.1128/aem.02704-20] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Accepted: 03/16/2021] [Indexed: 11/20/2022]  Open
12
Jia J, Fu Y, Jiang D, Mu F, Cheng J, Lin Y, Li B, Marzano SYL, Xie J. Interannual dynamics, diversity and evolution of the virome in Sclerotinia sclerotiorum from a single crop field. Virus Evol 2021;7:veab032. [PMID: 33927888 PMCID: PMC8058396 DOI: 10.1093/ve/veab032] [Citation(s) in RCA: 46] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
13
Sánchez O, Ferrera I, Mabrito I, Gazulla CR, Sebastián M, Auladell A, Marín-Vindas C, Cardelús C, Sanz-Sáez I, Pernice MC, Marrasé C, Sala MM, Gasol JM. Seasonal impact of grazing, viral mortality, resource availability and light on the group-specific growth rates of coastal Mediterranean bacterioplankton. Sci Rep 2020;10:19773. [PMID: 33188261 PMCID: PMC7666142 DOI: 10.1038/s41598-020-76590-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2020] [Accepted: 10/19/2020] [Indexed: 11/25/2022]  Open
14
Seasonal and diel patterns of abundance and activity of viruses in the Red Sea. Proc Natl Acad Sci U S A 2020;117:29738-29747. [PMID: 33172994 DOI: 10.1073/pnas.2010783117] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]  Open
15
Li H, Liu L, Wang Y, Cai L, He M, Wang L, Hu C, Jiao N, Zhang R. T4-like myovirus community shaped by dispersal and deterministic processes in the South China Sea. Environ Microbiol 2020;23:1038-1052. [PMID: 33089595 PMCID: PMC7984403 DOI: 10.1111/1462-2920.15290] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Accepted: 10/19/2020] [Indexed: 11/28/2022]
16
Luo E, Eppley JM, Romano AE, Mende DR, DeLong EF. Double-stranded DNA virioplankton dynamics and reproductive strategies in the oligotrophic open ocean water column. THE ISME JOURNAL 2020;14:1304-1315. [PMID: 32060418 PMCID: PMC7174320 DOI: 10.1038/s41396-020-0604-8] [Citation(s) in RCA: 45] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Revised: 12/17/2019] [Accepted: 01/30/2020] [Indexed: 12/11/2022]
17
Ignacio-Espinoza JC, Ahlgren NA, Fuhrman JA. Long-term stability and Red Queen-like strain dynamics in marine viruses. Nat Microbiol 2019;5:265-271. [PMID: 31819214 DOI: 10.1038/s41564-019-0628-x] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Accepted: 11/04/2019] [Indexed: 11/09/2022]
18
Ahlgren NA, Perelman JN, Yeh YC, Fuhrman JA. Multi-year dynamics of fine-scale marine cyanobacterial populations are more strongly explained by phage interactions than abiotic, bottom-up factors. Environ Microbiol 2019;21:2948-2963. [PMID: 31106939 DOI: 10.1111/1462-2920.14687] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Revised: 03/29/2019] [Accepted: 04/16/2019] [Indexed: 12/01/2022]
19
Dynamic marine viral infections and major contribution to photosynthetic processes shown by spatiotemporal picoplankton metatranscriptomes. Nat Commun 2019;10:1169. [PMID: 30862830 PMCID: PMC6414667 DOI: 10.1038/s41467-019-09106-z] [Citation(s) in RCA: 41] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2018] [Accepted: 02/21/2019] [Indexed: 12/11/2022]  Open
20
Finke JF, Suttle CA. The Environment and Cyanophage Diversity: Insights From Environmental Sequencing of DNA Polymerase. Front Microbiol 2019;10:167. [PMID: 30800109 PMCID: PMC6375837 DOI: 10.3389/fmicb.2019.00167] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Accepted: 01/22/2019] [Indexed: 11/13/2022]  Open
21
Nasko DJ, Chopyk J, Sakowski EG, Ferrell BD, Polson SW, Wommack KE. Family A DNA Polymerase Phylogeny Uncovers Diversity and Replication Gene Organization in the Virioplankton. Front Microbiol 2018;9:3053. [PMID: 30619142 PMCID: PMC6302109 DOI: 10.3389/fmicb.2018.03053] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2018] [Accepted: 11/27/2018] [Indexed: 12/20/2022]  Open
22
Weissman JL, Fagan WF, Johnson PLF. Selective Maintenance of Multiple CRISPR Arrays Across Prokaryotes. CRISPR J 2018;1:405-413. [PMID: 31021246 DOI: 10.1089/crispr.2018.0034] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
23
Breitbart M, Bonnain C, Malki K, Sawaya NA. Phage puppet masters of the marine microbial realm. Nat Microbiol 2018;3:754-766. [PMID: 29867096 DOI: 10.1038/s41564-018-0166-y] [Citation(s) in RCA: 322] [Impact Index Per Article: 53.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2017] [Accepted: 04/20/2018] [Indexed: 11/09/2022]
24
Hou W, Wang S, Briggs BR, Li G, Xie W, Dong H. High Diversity of Myocyanophage in Various Aquatic Environments Revealed by High-Throughput Sequencing of Major Capsid Protein Gene With a New Set of Primers. Front Microbiol 2018;9:887. [PMID: 29774020 PMCID: PMC5943533 DOI: 10.3389/fmicb.2018.00887] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2018] [Accepted: 04/18/2018] [Indexed: 12/02/2022]  Open
25
Potapov S, Belykh O, Krasnopeev A, Gladkikh A, Kabilov M, Tupikin A, Butina T. Assessing the diversity of the g23 gene of T4-like bacteriophages from Lake Baikal with high-throughput sequencing. FEMS Microbiol Lett 2018;365:4693836. [PMID: 29228190 DOI: 10.1093/femsle/fnx264] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2017] [Accepted: 12/04/2017] [Indexed: 01/09/2023]  Open
26
Arkhipova K, Skvortsov T, Quinn JP, McGrath JW, Allen CC, Dutilh BE, McElarney Y, Kulakov LA. Temporal dynamics of uncultured viruses: a new dimension in viral diversity. ISME JOURNAL 2017;12:199-211. [PMID: 29027998 DOI: 10.1038/ismej.2017.157] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2017] [Revised: 07/26/2017] [Accepted: 08/22/2017] [Indexed: 11/09/2022]
27
Roux S, Emerson JB, Eloe-Fadrosh EA, Sullivan MB. Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity. PeerJ 2017;5:e3817. [PMID: 28948103 PMCID: PMC5610896 DOI: 10.7717/peerj.3817] [Citation(s) in RCA: 170] [Impact Index Per Article: 24.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2017] [Accepted: 08/26/2017] [Indexed: 12/20/2022]  Open
28
Parada AE, Fuhrman JA. Marine archaeal dynamics and interactions with the microbial community over 5 years from surface to seafloor. ISME JOURNAL 2017;11:2510-2525. [PMID: 28731479 DOI: 10.1038/ismej.2017.104] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2016] [Revised: 05/16/2016] [Accepted: 05/25/2017] [Indexed: 11/09/2022]
29
Marine Bacterioplankton Seasonal Succession Dynamics. Trends Microbiol 2017;25:494-505. [DOI: 10.1016/j.tim.2016.12.013] [Citation(s) in RCA: 133] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Revised: 12/13/2016] [Accepted: 12/21/2016] [Indexed: 01/08/2023]
30
Needham DM, Sachdeva R, Fuhrman JA. Ecological dynamics and co-occurrence among marine phytoplankton, bacteria and myoviruses shows microdiversity matters. ISME JOURNAL 2017;11:1614-1629. [PMID: 28398348 DOI: 10.1038/ismej.2017.29] [Citation(s) in RCA: 98] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Revised: 01/13/2017] [Accepted: 02/02/2017] [Indexed: 12/21/2022]
31
Marston MF, Martiny JBH. Genomic diversification of marine cyanophages into stable ecotypes. Environ Microbiol 2016;18:4240-4253. [DOI: 10.1111/1462-2920.13556] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2016] [Revised: 09/12/2016] [Accepted: 09/27/2016] [Indexed: 01/07/2023]
32
Cobián Güemes AG, Youle M, Cantú VA, Felts B, Nulton J, Rohwer F. Viruses as Winners in the Game of Life. Annu Rev Virol 2016;3:197-214. [DOI: 10.1146/annurev-virology-100114-054952] [Citation(s) in RCA: 158] [Impact Index Per Article: 19.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
33
Uyaguari-Diaz MI, Chan M, Chaban BL, Croxen MA, Finke JF, Hill JE, Peabody MA, Van Rossum T, Suttle CA, Brinkman FSL, Isaac-Renton J, Prystajecky NA, Tang P. A comprehensive method for amplicon-based and metagenomic characterization of viruses, bacteria, and eukaryotes in freshwater samples. MICROBIOME 2016;4:20. [PMID: 27391119 PMCID: PMC5011856 DOI: 10.1186/s40168-016-0166-1] [Citation(s) in RCA: 56] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2015] [Accepted: 04/04/2016] [Indexed: 05/16/2023]
34
Hanson CA, Marston MF, Martiny JBH. Biogeographic Variation in Host Range Phenotypes and Taxonomic Composition of Marine Cyanophage Isolates. Front Microbiol 2016;7:983. [PMID: 27446023 PMCID: PMC4919323 DOI: 10.3389/fmicb.2016.00983] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2016] [Accepted: 06/07/2016] [Indexed: 11/13/2022]  Open
35
Millard AD, Pearce D, Zwirglmaier K. Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on g23 sequence diversity. FEMS Microbiol Lett 2016;363:fnw043. [PMID: 26903011 DOI: 10.1093/femsle/fnw043] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/16/2016] [Indexed: 11/14/2022]  Open
36
Ballaud F, Dufresne A, Francez AJ, Colombet J, Sime-Ngando T, Quaiser A. Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat. Front Microbiol 2016;6:1494. [PMID: 26779149 PMCID: PMC4701944 DOI: 10.3389/fmicb.2015.01494] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2015] [Accepted: 12/11/2015] [Indexed: 11/23/2022]  Open
37
Chow CET, Suttle CA. Biogeography of Viruses in the Sea. Annu Rev Virol 2015;2:41-66. [PMID: 26958906 DOI: 10.1146/annurev-virology-031413-085540] [Citation(s) in RCA: 71] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
38
Using signature genes as tools to assess environmental viral ecology and diversity. Appl Environ Microbiol 2015;80:4470-80. [PMID: 24837394 DOI: 10.1128/aem.00878-14] [Citation(s) in RCA: 92] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
39
Goldsmith DB, Parsons RJ, Beyene D, Salamon P, Breitbart M. Deep sequencing of the viral phoH gene reveals temporal variation, depth-specific composition, and persistent dominance of the same viral phoH genes in the Sargasso Sea. PeerJ 2015;3:e997. [PMID: 26157645 PMCID: PMC4476143 DOI: 10.7717/peerj.997] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2015] [Accepted: 05/13/2015] [Indexed: 11/20/2022]  Open
40
Marine microbial community dynamics and their ecological interpretation. Nat Rev Microbiol 2015;13:133-46. [PMID: 25659323 DOI: 10.1038/nrmicro3417] [Citation(s) in RCA: 403] [Impact Index Per Article: 44.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
41
Rising to the challenge: accelerated pace of discovery transforms marine virology. Nat Rev Microbiol 2015;13:147-59. [PMID: 25639680 DOI: 10.1038/nrmicro3404] [Citation(s) in RCA: 194] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
42
Gustavsen JA, Winget DM, Tian X, Suttle CA. High temporal and spatial diversity in marine RNA viruses implies that they have an important role in mortality and structuring plankton communities. Front Microbiol 2014;5:703. [PMID: 25566218 PMCID: PMC4266044 DOI: 10.3389/fmicb.2014.00703] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2014] [Accepted: 11/26/2014] [Indexed: 01/26/2023]  Open
43
Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses. Proc Natl Acad Sci U S A 2014;111:10714-9. [PMID: 25002514 DOI: 10.1073/pnas.1319778111] [Citation(s) in RCA: 75] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]  Open
44
Chow CET, Kim DY, Sachdeva R, Caron DA, Fuhrman JA. Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists. ISME JOURNAL 2013;8:816-29. [PMID: 24196323 DOI: 10.1038/ismej.2013.199] [Citation(s) in RCA: 169] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2013] [Revised: 09/10/2013] [Accepted: 09/26/2013] [Indexed: 01/25/2023]
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New approaches indicate constant viral diversity despite shifts in assemblage structure in an Australian hypersaline lake. Appl Environ Microbiol 2013;79:6755-64. [PMID: 23995931 DOI: 10.1128/aem.01946-13] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]  Open
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Strong seasonality and interannual recurrence in marine myovirus communities. Appl Environ Microbiol 2013;79:6253-9. [PMID: 23913432 DOI: 10.1128/aem.01075-13] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
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Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight. ISME JOURNAL 2013;7:2259-73. [PMID: 23864126 DOI: 10.1038/ismej.2013.122] [Citation(s) in RCA: 97] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2012] [Revised: 06/12/2013] [Accepted: 06/18/2013] [Indexed: 11/08/2022]
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Needham DM, Chow CET, Cram JA, Sachdeva R, Parada A, Fuhrman JA. Short-term observations of marine bacterial and viral communities: patterns, connections and resilience. ISME JOURNAL 2013;7:1274-85. [PMID: 23446831 DOI: 10.1038/ismej.2013.19] [Citation(s) in RCA: 100] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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Abundant SAR11 viruses in the ocean. Nature 2013;494:357-60. [PMID: 23407494 DOI: 10.1038/nature11921] [Citation(s) in RCA: 238] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2012] [Accepted: 01/18/2013] [Indexed: 12/19/2022]
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Marston MF, Taylor S, Sme N, Parsons RJ, Noyes TJE, Martiny JBH. Marine cyanophages exhibit local and regional biogeography. Environ Microbiol 2012;15:1452-63. [PMID: 23279166 DOI: 10.1111/1462-2920.12062] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2012] [Revised: 11/26/2012] [Accepted: 11/27/2012] [Indexed: 11/28/2022]
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