BIOCHEMISTRY OF PROTEIN SYNTHESIS IN PLANTS

Thylakoid membranes: the translational site of chloroplast DNA-regulated thylakoid polypeptides

Stromal ribosomes and those bound to thylakoid membranes were prepared from intact spinach chloroplasts which were purified on Percoll gradients. The products of read-out translation of these ribosomes supplemented with an Escherichia coli extract were analyzed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Striking similarity was found between the polypeptides labeled in the read-out translation of the chloroplastic ribosomes and those synthesized in isolated chloroplasts. Among the polypeptides translated on thylakoid-bound ribosomes, apoprotein of chlorophyll-protein complex I, alpha and beta subunits of coupling factor 1, and 32,000-Da membrane polypeptide were identified from their mobility on the polyacrylamide gel. The large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase and other several stromal proteins were translated exclusively from stromal ribosomes. However, when the translation was programmed in cell-free systems from either E. coli, wheat germ, or rabbit reticulocytes by RNAs isolated separately from stroma and thylakoids, no qualitative difference was found between the products from those RNAs. These results suggest that thylakoid-bound ribosomes are the main sites of synthesis of thylakoid proteins and stromal-free ribosomes are that of stromal proteins, and that thylakoids and stroma contain mRNAs for the stromal and the thylakoid proteins, respectively, in a form not functioning in the chloroplasts.

Sedimentation behavior of chloroplast ribosomes from Chlamydomonas reinhardtii

The identity of peaks generated by chloroplast ribosomes of Chlamydomonas reinhardtii were determined by zone velocity sedimentation on sucrose density gradients, and analysis of distribution of ribosomal RNAs in the gradients. The sedimentagion coefficient of the principal peak was 66-70 S (usually 69 S), in good agreement with previously reported values for chloroplast ribosomes of C. reinhardtii, and other organisms. The fast sedimenting side of the 69 S peak contained an excess of chloroplast large subunit. When ribosome dissociation was prevented by sedimentation at low velocity, by aldehyde fixation, or by the presence of nascent polypeptide chains, the principal peak had a sedimentation coefficient of about 75 S. Thus the 69 S peak was an artifact caused by dissociation during centrifugation. Peaks that contained chloroplast ribosomal RNAs were also observed at '60 S' and '45 S' when chloroplast ribosomes were centrifuged unfixed at high velocity. The amounts of '60 S' and '45 S' components were decreased by centrifugation at low speed, or fixation, but sedimentation coefficients remained unchanged. The '60 S', and '45 S' components were identified as large, and small subunits of chloroplast ribosomes, respectively. The artifacts produced by centrifugation of chloroplast ribosomes, are similar to the artifacts produced by centrifuging ribosomes of Escherichia coli. Similar explanations appear to apply to both. We concluded that the 69 S chloroplast ribosome peak occurs because of dissociation of 'tight' couples, and incomplete separation of subunits. Subunit peaks (60 S and 45 S) arise from free subunits, and/or from dissociation of 'loose' couples.

Purification of the elongation factors present in spinach chloroplasts

Elongation factor G (EF-Gchl) and elongation factor Tu (EF-TUchl) have been purified from isolated spinach chloroplasts. On polyacrylamide gel electrophoresis the purifed proteins appear to be at least 70% pure. The molecular weight has been estimated to be 77000 and 45500 for EF-Gchl and EF-TUchl respectively. Chloroplast elongation factor T (EF-Tchl) has been only partially purified. Gel electrophoresis under non-denaturing and denaturing conditons indicate that EF-T-chl is most probably composed of two polypeptides, one of which has an electrophoretic mobility identical to that of EF-TUchl. EF-TUchl appears to represent approximately 7% of the chloroplast soluble protein while EF-Gchl accounts for less than 1%. Just as in the case of the bacterial factors, EF-TUchl appears to be in excess as compared to EF-Gchl. Although no data were obtained on the concentration of EF-Tchl, it may be assumed that the three elongation factors represent approximately 10% of the chloroplast soluble protein.

Qualitative and quantitative immunofluorescence studies of chloroplast ferredoxin : Application to investigations of ferredoxin inheritance in Nicotiana hybrids

Antibodies were raised in rabbits against 2Fe-2S ferredoxin from N. tabacum L. The antibodies showed partial cross-reactivity in the double diffusion test with ferredoxins from Spinacia oleracea L., Petunia inflata Fries., P. axillaris Lam., Phaseolus vulgaris L., Chlamydomonas remhardii Dang. A complete cross-reaction was observed with ferredoxins from five other Nicotiana species, thus with this test it was impossible to discriminate between these ferredoxins. Therefore the following test was performed. Heterologous ferredoxin (i.e., ferredoxin other than from N. tabacum) was coupled covalently to Sepharose beads. Rabbit anti-N. tabacum-serum was then pre-incubated with this ferredoxin which resulted in complete abolition of cross-reactivity with free heterologous ferredoxin. However, the serum retained antibody activity against specific antigenic determinants of N. tabacum ferredoxin. When this serum was tested against ferredoxin purified from the hybrid: N. tabacum (♀)xN. glutinosa (♂) it gave a positive reaction. The relative content of maternal N. tabacum ferredoxin in the hybrid was estimated by using a fluorescent derivative of this specific antibody and estimating the cross-reactivity compared with that of artificial mixtures of pure N. tabacum and N. glutinosa ferredoxins. The hybrid contained 50% of maternal ferredoxin. This technique was also applied to ferredoxins of other species of Nicotiana and to the ferredoxin from the hybrid N. clevelandii (♀)xN. glutinosa (♂). We conclude that it provides a good test system for the study of the expression of chloroplast ferredoxin in Nicotiana hybrids in general.

Protein synthesis in chloroplasts. VII. Initiation of protein synthesis in isolated intact pea chloroplasts

Isolated intact pea chloroplasts use light energy to synthesise N-formayl [35S]-methionylpuromycin when incubated with L-[35S]methionine and puromycin. Control experiments establish that this synthesis occurs on chloroplast ribosomes, and not on contaminating mitochondrial or bacterial ribosomes. The amount of N-formylmethionylpuromycin formed suggests that each messenger RNA that is being translated in vitro undergoes initiation at least twice. We conclude that isolated, intact pea chloroplasts carry out the initiation of protein synthesis, as well as the elongation and termination of polypeptide chains.

Evidence from inhibitor studies that the endophyte synthesises nitrogenase in the root nodules of Alnus glutinosa L. Gaertn

Nitrogenase activity (acetylene reduction assay) in the nodulated non-leguminous angiosperm Alnus glutinosa is inhibited within minutes when plants are exposed to a gas phase containing 90% oxygen On returning the plants to air, nitrogenase activity recovers within a few hours, both in the presence of cycloheximide, which inhibits protein synthesis on 80 S (eukaryotic) ribosomes, and in the absence of inhibitor. When chloramphenicol, which inhibits protein synthesis on 70 S (prokaryotic) ribosomes, is added instead of cycloheximide, recovery from oxygen inhibition does not occur, or occurs only slowly. The effects of chloramphenicol are specific to the D-threo-isomer which indicates a direct inhibition of protein synthesis. Erythromycin has a similar effect to chloramphenicol. Protein biosynthesis in non-nodulated roots is inhibited by cycloheximide but not by chloramphenicol. The results are interpreted as evidence that the nitrogenase within Alnus glutinosa root nodules is synthesised by the microbial symbiont.

Biochemical differentiation of plastids and other organelles in rye leaves with a high-temperature-induced deficiency of plastid ribosomes

1. In developing rye (Secale cereale L.) leaves the formation of plastidic ribosomes was selectively prevented in light as well as in darkness, when the seedlings were grown at an elevated temperature of 32° instead of 22° where normal development ocurred. Plastid ribosome deficient parts of lightgrown leaves were chlorotic at 32°. - 2. At both temperatures the leaves contained under all conditions (light or dark, on H2O or nutrient solution) equal or very similar amounts of total amino nitrogen. In light, the contents of total protein and dry weight were lower at 32° than at 22°, especially when the plants were grown on nutrient solution. - 3. Mitochondrial marker enzymes had normal or even higher activities in 32°-grown leaves. Respiration rates were similar for segments of leaves grown on water in light either at 32° or at 22° but by 20-30% lower for 32°-grown plants when they had been raised in darkness or on nutrient solution. In contrast to 22°-grown tissue, respiration of 32°-grown leaf segments was rather insensitive to KCN. Comparative inhibitor studies indicated the presence of both the cyanide-sensitive and the cyanide-insensitive pathway of respiration in 32°-grown leaves. - 4. Leaf microbody marker enzymes were present in leaves grown at 32°. From chlorotic parts of 32°-light-grown leaves a typical microbody fraction was isolated on sucrose densitygradients. - 5. Leaves of seedlings grown at 32° contained only very low levels of ribulosediphosphate carboxylase activity and of fraction I protein. Photosynthetic (14)CO2-fixation of such leaves was only a few per cent of that observed in normal leaves, and no photosynthetic oxygen evolution was observed in chlorotic leaf segments. However, ten other soluble enzymes which are exclusively or partially localized in chloroplasts reached high activities under all conditions at 32° (Table 4). - 6. From chlorotic parts of 32°-light-grown leaves as well as from etiolated 32°-grown leaves a fraction of intact plastids was isolated and purified by sucrose gradient centrifugation which contained several soluble chloroplast enzymes. From the results we conclude that cytoplasmic protein synthesis must contribute a functional chloroplast envelope including the mechanism for the recognition and uptake of chloroplast proteins which are synthesized on cytoplasmic ribosomes.

Amino acid incorporation into protein by ribosomes bound to chloroplast thylakoid membranes: formation of discrete products

A system which incorporates amino acids into proteins of chloroplast membranes of Chlamydomonas reinhardti is described. It consists of chloroplast ribosomes bound to thylakoid membranes and cell extract. mRNA is present in this thylakoid-ribosome complex, since neither initiation nor RNA synthesis seems to be required for amino acid incorporation. Incorporation requires ATP, GTP and a soluble portion of cell extract. It is inhibited by chloramphenicol, but not cycloheximide. Most incorporated radioactivity remains bound to the membranes. Although a large portion of this labeled membrane-bound protein occurs as nascent polypeptides, a portion appears at least four products of discrete molecular weights. The major in vitro product migrates as a polypeptide of 23 000 daltons. We conclude that a portion of chloroplast membrane proteins is not only made within the chloroplast, but directly on the membranes. We had previously observed that release of membrane-bound ribosomes is partially dependent on puromycin, and concluded that some membrane-bound ribosomes were attached to the membranes through nascent protein chains. Thus, our results suggest that some chloroplast membrane proteins are inserted into the membranes as they are synthesized. This chloroplast membrane amino acid incorporation system offers a promising tool for studying biosynthesis of membrane proteins, and how they become inserted into chloroplast thylakoids to form functional membranes.

Inhibition of grana formation by lincomycin

The antibiotic lincomycin is a specific inhibitor of chloroplast ribosomal activity in greening leaves of Pisum sativum at 1 μg/ml, and prevents both the formation of chloroplast membranes and their stacking into grana. This finding suggests that one function of chloroplast ribosomes is to synthesise at least one protein component of thylakoid membranes.