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Ma R, Wang Y, Huang L, Zhao S, Li L, Yin M, Fang W. Effects of different salinity on the transcriptome and antibiotic resistance of two Vibrio parahaemolyticus strains isolated from Penaeus vannamei cultured in seawater and freshwater ponds. JOURNAL OF FISH DISEASES 2021; 44:2055-2066. [PMID: 34496040 DOI: 10.1111/jfd.13520] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2021] [Revised: 08/06/2021] [Accepted: 08/10/2021] [Indexed: 06/13/2023]
Abstract
The transcriptome and antibiotic resistance of Vibrio parahaemolyticus isolated from Penaeus vannamei cultured in seawater (strain HN1)and freshwater (strain SH1) ponds were studied at different salinity (2‰ and 20‰). At different salinity, 623 differentially expressed genes (DEGs) significantly upregulated and 1,559 DEGs significantly downregulated in SH1. In HN1, 466 DEGs significantly upregulated and 1,930 DEGs significantly downregulated, indicating high salinity can lead to the downregulation of most genes. In KEGG analysis, the expression of DEGs annotated to starch and sucrose metabolism pathway was higher at 2‰ salinity than at 20‰ salinity in HN1 and SH1, implying salinity affected bacterial growth mainly through this pathway. In the enrichment analysis of upregulated DEGs, two pathways (Valine, leucine, and isoleucine degradation, and Butanoate metabolism) were significantly enriched at different salinity. Antibiotic-susceptibility test discovered that SH1 isolated from P. vannamei cultured in freshwater was resistant to multiple drugs, including kanamycin, gentamicin, medemycin, and azithromycin, at a salinity of 2‰, whereas at 20‰ salinity, SH1 was not resistant to the drugs. The HN1 strain isolated from P. vannamei cultured in mariculture was resistant to polymyxin B and clindamycin at 20‰ salinity. Whereas, HN1 was intermediately susceptible to these two antibiotics at 2‰ salinity. These results indicate that the drug resistance of bacteria was affected by salinity. Furthermore, beta-lactam resistance was significantly enriched in SH1 at different salinity, and the inhibition zone of penicillin G was consistent with the results of a beta-lactam resistance pathway.
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Affiliation(s)
- Rongrong Ma
- Key Laboratory of East China Sea Fishery Resources Exploitation, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China
- College of Marine Sciences, Ningbo University, Ningbo, China
| | - Yuan Wang
- Key Laboratory of East China Sea Fishery Resources Exploitation, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China
| | - Liang Huang
- Key Laboratory of East China Sea Fishery Resources Exploitation, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China
| | - Shu Zhao
- Key Laboratory of East China Sea Fishery Resources Exploitation, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China
| | - Letian Li
- Key Laboratory of East China Sea Fishery Resources Exploitation, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China
| | - Menghe Yin
- Key Laboratory of East China Sea Fishery Resources Exploitation, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China
| | - Wenhong Fang
- Key Laboratory of East China Sea Fishery Resources Exploitation, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China
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Lee Y, Choi Y, Lee S, Lee H, Kim S, Ha J, Lee J, Oh H, Kim Y, Yoon Y. Occurrence of pathogenic Vibrio parahaemolyticus
in seafood distribution channels and their antibiotic resistance profiles in S. Korea. Lett Appl Microbiol 2019; 68:128-133. [DOI: 10.1111/lam.13099] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2018] [Revised: 11/10/2018] [Accepted: 11/13/2018] [Indexed: 11/29/2022]
Affiliation(s)
- Y. Lee
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - Y. Choi
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - S. Lee
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - H. Lee
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - S. Kim
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - J. Ha
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - J. Lee
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - H. Oh
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - Y. Kim
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
| | - Y. Yoon
- Department of Food and Nutrition; Sookmyung Women's University; Seoul Korea
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Karunasagar I, Maiti B, Kumar BK. Molecular Methods to Study Vibrio parahaemolyticus and Vibrio vulnificus From Atypical Environments. J Microbiol Methods 2018. [DOI: 10.1016/bs.mim.2018.09.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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Bonnin-Jusserand M, Copin S, Le Bris C, Brauge T, Gay M, Brisabois A, Grard T, Midelet-Bourdin G. Vibrio species involved in seafood-borne outbreaks (Vibrio cholerae, V. parahaemolyticus and V. vulnificus): Review of microbiological versus recent molecular detection methods in seafood products. Crit Rev Food Sci Nutr 2017; 59:597-610. [DOI: 10.1080/10408398.2017.1384715] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Maryse Bonnin-Jusserand
- Univ. Littoral Côte d'Opale, convention ANSES, EA 7394 – ICV – Institut Charles Viollette, Boulogne-sur-Mer, France
- INRA, France
- Univ. Lille, Lille, France
- ISA, Lille, France
- Univ. Artois, Arras, France
| | - Stéphanie Copin
- French Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Boulevard du Bassin Napoléon, Boulogne-sur-Mer, France
| | - Cédric Le Bris
- Univ. Littoral Côte d'Opale, convention ANSES, EA 7394 – ICV – Institut Charles Viollette, Boulogne-sur-Mer, France
| | - Thomas Brauge
- French Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Boulevard du Bassin Napoléon, Boulogne-sur-Mer, France
| | - Mélanie Gay
- French Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Boulevard du Bassin Napoléon, Boulogne-sur-Mer, France
| | - Anne Brisabois
- French Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Boulevard du Bassin Napoléon, Boulogne-sur-Mer, France
| | - Thierry Grard
- Univ. Littoral Côte d'Opale, convention ANSES, EA 7394 – ICV – Institut Charles Viollette, Boulogne-sur-Mer, France
| | - Graziella Midelet-Bourdin
- French Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Boulevard du Bassin Napoléon, Boulogne-sur-Mer, France
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Antimicrobial Resistance and Minimum Inhibitory Concentrations of Vibrio parahaemolyticus Strains Isolated from Gomso Bay, Korea. ACTA ACUST UNITED AC 2016. [DOI: 10.5657/kfas.2016.0582] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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6
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Detection and quantification of pathogenic Vibrio parahaemolyticus in shellfish by using multiplex PCR and loop-mediated isothermal amplification assay. Food Control 2015. [DOI: 10.1016/j.foodcont.2014.08.010] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Hossain MT, Kim YO, Kong IS. Multiplex PCR for the detection and differentiation of Vibrio parahaemolyticus strains using the groEL, tdh and trh genes. Mol Cell Probes 2013; 27:171-5. [PMID: 23660458 DOI: 10.1016/j.mcp.2013.04.001] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2013] [Revised: 04/22/2013] [Accepted: 04/24/2013] [Indexed: 11/26/2022]
Abstract
Vibrio parahaemolyticus is a significant cause of human gastrointestinal disorders worldwide, transmitted primarily by ingestion of raw or undercooked contaminated seafood. In this study, a multiplex PCR assay for the detection and differentiation of V. parahaemolyticus strains was developed using primer sets for a species-specific marker, groEL, and two virulence markers, tdh and trh. Multiplex PCR conditions were standardised, and extracted genomic DNA of 70 V. parahaemolyticus strains was used for identification. The sensitivity and efficacy of this method were validated using artificially inoculated shellfish and seawater. The expected sizes of amplicons were 510 bp, 382 bp, and 171 bp for groEL, tdh and trh, respectively. PCR products were sufficiently different in size, and the detection limits of the multiplex PCR for groEL, tdh and trh were each 200 pg DNA. Specific detection and differentiation of virulent from non-virulent strains in shellfish homogenates and seawater was also possible after artificial inoculation with various V. parahaemolyticus strains. This newly developed multiplex PCR is a rapid assay for detection and differentiation of pathogenic V. parahaemolyticus strains, and could be used to prevent disease outbreaks and protect public health by helping the seafood industry maintain a safe shellfish supply.
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