Redefinition of the Urostylidae (Ciliophora, Hypotrichida) on the Basis of Morphogenetic Characters*

Documentation of a new hypotrich species in the family Amphisiellidae, Lamtostyla gui n. sp. (Protista, Ciliophora) using a multidisciplinary approach

An integrated approach considering both morphologic and molecular data is now required to improve biodiversity estimations and provide more robust systematics interpretations in hypotrichs, a highly differentiated group of ciliates. In present study, we document a new hypotrich species, Lamtostyla gui n. sp., collected from Chongming wetland, Shanghai, China, based on investigations using living observation, protargol staining, scanning and transmission electron microscopy, and gene sequencing. The new species is mainly recognized by having a short amphisiellid median cirral row composed of four cirri, three frontoventral cirri, three dorsal kinetids, four to eight macronuclear nodules, and small colorless cortical granules distributed as rosettes around dorsal bristles. Transmission electron microscope observation finds the associated microtubules of cirri and pharyngeal discs of L. gui are distinct from those in other hypotrichs. Morphogenesis of this species indicates that parental adoral membranelles retained intact or partial renewed is a potential feature to separate Lamtostyla granulifera-group and Lamtostyla lamottei-group. Phylogenetic analysis based on small subunit ribosomal RNA (rRNA) gene shows that this molecular marker is not useful to resolve phylogenetic relationships of the genus Lamtostyla, as well as many other hypotrichous taxa. We additionally characterize the internal transcribed spacers (ITS) region and the almost complete large subunit rRNA, which will be essential for future studies aimed at solving phylogenetic problems of Lamtostyla, or even the family Amphisiellidae. As a final remark, the critical screening of GenBank using ITS genes of our organism allows us to recognize a large amount of hypotrichous sequences have been misclassified as fungi. This observation suggests that hypotrichs could be frequently found in fungi-rich environment and overlooked by fungal specialists.

Evolution of the order Urostylida (Protozoa, Ciliophora): new hypotheses based on multi-gene information and identification of localized incongruence

Previous systematic arrangement on the ciliate order Urostylida was mainly based on morphological data and only about 20% taxa were analyzed using molecular phylogenetic analyses. In the present investigation, 22 newly sequenced species for which alpha-tubulin, SSU rRNA genes or ITS1-5.8S-ITS2 region were sampled, refer to all families within the order. Following conclusions could be drawn: (1) the order Urostylida is not monophyletic, but a core group is always present; (2) among the family Urostylidae, six of 10 sequenced genera are rejected belonging to this family; (3) the genus Epiclintes is confirmed belonging to its own taxon; (4) the family Pseudokeronopsidae undoubtedly belongs to the core portion of urostylids; however, some or most of its members should be transferred to the family Urostylidae; (5) Bergeriellidae is confirmed to be a valid family; (6) the distinction of the taxon Acaudalia is not supported; (7) the morphology-based genus Anteholosticha is extremely polyphyletic; (8) ITS2 secondary structures of Pseudoamphisiella and Psammomitra are rather different from other urostylids; (9) partition addition bootstrap alteration (PABA) result shows that bootstrap values usually tend to increase as more gene partitions are included.

The morphology and morphogenesis of a marine ciliate, Epiclintes auricularis rarisetus nov. sspec. (Ciliophora, Epiclintidae), from the Yellow Sea

The morphology and morphogenesis of a marine ciliate, Epiclintes auricularis rarisetus nov. sspec., collected from Qingdao, northern China were studied on live and protargol-impregnated specimens. This isolate can be recognized by its elongate, contractile and tripartite body with a size of 200-400 x 20-40microm in vivo, about 30 ventrally located adoral membranelles, short undulating membranes, 2-3 frontal and 10-18 transverse cirri as well as 8-9 fronto-midventral rows, 22-31 left and 35-54 right marginal cirri, but no caudal cirri, invariably 3 dorsal kineties, of which kineties 1 and 3 link together anteriorly, 24-70 macronuclear nodules, marine habitat, and contribution of almost all frontal-midventral transverse cirral anlagen (FVT anlagen) to the formation of fronto-midventral rows. In its divisional morphogenesis, this species demonstrates some features rarely if ever found in any other urostyloids, e.g. partial replacement of the old adoral zone of membranelles, de novo formation of the oral primordium and the anlagen for marginal rows and dorsal kineties, contribution of almost all FVT anlagen to the transverse cirri, lack of frontoterminal cirri. In addition, its morphogenesis appears to differ in detail from that of E. auricularis auricularis nov. stat., based on published data. These remarkable morphogenetic traits of Epiclintes suggests a questionable systematic position for this genus in the Urostyloidea, therefore, further researches are urgently needed.

Tunicothrix rostrata n. g., n. sp., a new urostylid ciliate (Ciliophora, Stichotrichia) from the Yellow Sea

The morphology and infraciliature of a new ciliate, Tunicothrix rostrata n. g., n. sp., isolated from the Yellow Sea, are investigated using live observation and protargol impregnation. Tunicothrix rostrata measures about 160 x 40 mum in vivo, and has a frontal beak-like protrusion, a conspicuous cortical alveolar layer, two right marginal rows, and usually three distinct midventral pairs. The discovery of T. rostrata enables us to reconsider the classification of Erniella wilberti, a curious ciliate with obscure midventral pairs. Both species are highly similar in overall appearance and nuclear and ciliary pattern. Thus, they are united in a new genus of the family Urostylidae, Tunicothrix, and E. wilberti is transferred to Tunicothrix: Tunicothrix wilbertiLin and Song, 2004 n. comb. By contrast, Erniella filiformis, type species of Erniella, has several ventral rows and does not belong to the urostylids. Tunicothrix rostrata is easily distinguished from T. wilberti by its beak-like anterior protrusion and by the distinctly elongated right marginal row 2, which curves anteriorly on the dorsal side of the cells. Tunicothrix is closely related to Parabirojimia, differing by the invariably two (vs. five-eight) right marginal rows and the conspicuous (vs. ordinary) alveolar layer, a unique feature in urostylid ciliates.

A molecular phylogenetic investigation of Pseudoamphisiella and Parabirojimia (Protozoa, Ciliophora, Spirotrichea), two genera with ambiguous systematic positions

The gene coding for the small subunit ribosomal RNA molecule was sequenced in three marine spirotrichs: Pseudoamphisiella lacazei, P. alveolata, and Parabirojimia similis, the systematic positions of which remain unclear in spite of recent progress. Phylogenetic trees were constructed by means of neighbor-joining (NJ), least-squares (LS), maximum parsimony (MP), and Bayesian inference (BI) methods in order to test previously inferred phylogenetic assignments of Pseudoamphisiella and Parabirojimia based on morphological and morphogenetic data. The main results are that: (1) all trees constructed have similar topologies in which the genus Parabirojimia derives at the base of the class Stichotrichia, which suggests that it might represent a unique taxon at about suborder or even-order level near urostylids; (2) the present study supports the conclusion reported by previous researchers that urostylids could be a paraphyletic assemblage and that Uroleptus and Paruroleptus should be removed from the order Urostylida; (3) Pseudoamphisiellidae/Pseudoamphisiella always clusters with Prodiscocephalus borrori rather than with urostylids, which indicates that they might represent an ancestral form for both discocephaline and urostylid species; (4) the monophyly of the traditional suborder Discocephalina and typical euplotids is consistently rejected. Based on both morphological/morphogenetical and molecular data obtained, a new suborder Parabirojimina n. subord. is suggested, which currently includes one family, Parabirojimidae n. fam., and the single genus Parabirojimia.

Morphological Redescription and Neotypification of the Marine Ciliate, Amphisiella marioni (Ciliophora: Hypotrichida), a Poorly Known Form Misidentified for a Long Time

The "well-known" marine hypotrichous ciliate, Amphisiella marioni Gourret & Roeser, 1888 has been repeatedly misidentified for over a century, which has led to great confusion in the species identification. Based on a population collected from mariculture water in Qingdao (Tsingtao), north China, the morphology and infraciliature were investigated using live observations and the protargol impregnation method. The Chinese population corresponds perfectly with the original description by Gourret and Roeser (1888). As the type species of Amphisiella, its morphological characteristics include: an elongated body about 90-150 microm long in vivo; with grouped cortical granules arranged in irregular rows throughout the whole body; a contractile vacuole located slightly behind mid-body; adoral zone of membranelles slightly bipartite in structure with the anterior part ventrally located; amphisiellid median cirral row (ACR) extending to the level of the transverse cirri (TC); about eight frontal cirri left of the ACR; closely spaced marginal rows, displaced inwards, each with about 32 cirri; six TC arranged in a V-shape; no caudal cirrus; five to six dorsal kineties; and typically two macronuclei. We conclude that the populations described by Mansfeld (1923) and Wicklow (1982), respectively, were misidentified. To clarify the taxonomic status of this species, the population from the northern Chinese coast of the Yellow Sea is designated as a neotype.

Holosticha hamulata n. sp. and Holosticha heterofoissneri Hu and Song, 2001, Two Urostylid Ciliates (Protozoa, Ciliophora) from Intertidal Sediments of the Yellow Sea

Two marine urostylid ciliates, Holosticha hamulata n. sp. and Holosticha heterofoissneri Hu and Song, 2001, were investigated using live observation and protargol impregnation. Both species were isolated from Korean intertidal sediments of the Yellow Sea. Holosticha hamulata measures about 150 x 25 mum in vivo, and is characterized by a tripartite body shape with a narrow head, an inflated trunk, and a tail that distally projects ventrally forming a hook-like structure. It is the characteristic body shape that distinguishes H. hamulata distinctly from congeners. Holosticha hamulata differs from H. heterofoissneri, possibly the nearest relative, also by the location of the contractile vacuole (ahead of mid-body versus near posterior body third) and the configuration of the macronucleus (on average, 33 scattered nodules assuming a Y-shape versus 17 nodules that may form a U shape). The average number of the macronuclear nodules is a pronounced feature showing great consistency in populations of each species. However, their arrangement is variable in H. heterofoissneri where the nodules are basically scattered or connected by fine fibers forming an elongate U-shape. The location of the contractile vacuole as a taxonomic feature is discussed and a dichotomous key to the species of Holosticha sensu stricto is provided.

Morphology and Infraciliature of Three Species of Metaurostylopsis (Ciliophora, Stichotrichia): M. songi n. sp., M. salina n. sp., and M. marina (Kahl 1932) from Sediments, Saline Ponds, and Coastal Waters

Two new urostylid ciliates, Metaurostylopsis songi n. sp. and Metaurostylopsis salina n. sp. and Metaurostylopsis marina (Kahl 1932) are investigated using live observation and protargol impregnation. These species were isolated in Korea from intertidal sediments, saline ponds, and coastal waters. Metaurostylopsis songi is in vivo about 120 microm x 25 microm, has a slenderly ellipsoidal body, colorless cortical granules in rows on ventral and dorsal body sides, about 54 macronuclear nodules, 28-47 adoral membranelles, five frontal, two or three frontoterminal and six or seven transverse cirri, and 9-12 midventral cirral pairs followed posteriorly by 1-3 single cirri. In vivo M. salina is about 60 microm x 25 microm, has a pyriform body, colorless cortical granules irregularly arranged, about 45 macronuclear nodules, 18-23 adoral membranelles, three frontal, three to five frontoterminal and two to five transverse cirri, and four or five midventral cirral pairs followed posteriorly by five to seven single cirri. Both species have three marginal cirral rows on each body side and 3 long dorsal kineties. The Korean specimens of M. marina match the Chinese population in all main features. Metaurostylopsis songi differs from M. marina by the more slender body, the number of frontal cirri (invariably five vs. four), and the arrangement of cortical granules (in rows on dorsal and ventral cortex vs. only along dorsal kineties and anterior body margin). Metaurostylopsis salina differs from its congeners by the distinctly smaller size, the pyriform body shape, the scattered cortical granules (vs. in rows), and number of frontal cirri. It differs from M. marina also by the number of midventral cirral pairs (four or five vs. seven to 11).

Divisional morphogenesis in Uroleptus caudatus (Stokes, 1886), and the relationship between the Urostylidae and the Parakahliellidae, Oxytrichidae, and Orthoamphisiellidae on the basis of morphogenetic processes (Ciliophora, Hypotrichida)

Morphogenetic processes during division in Uroleptus caudatus (Stokes, 1886) are described using protargol impregnation. As is typical for the family Urostylidae Bütschli, 1889, zigzag midventral cirri develop, but contrary to most species of this family the adoral membranelles of the proter are not renewed during division and two dorsomarginal kineties develop. These two atypical features occur in only two other species of the Urostylidae (Uroleptus musculus, Holosticha diademata), and in all species of the family Parakahliellidae Eigner. 1997, and in many of the Oxytrichidae Ehrenberg, 1838. Membranelles are also not renewed in the Orthoamphisiellidae Eigner, 1997. This shows that these three atypical members of the family Urostylidae are those which are most closely related to the other three hypotrichous families named above. The highly distinct zigzag midventral cirri clearly separate the family Urostylidae from the other three hypotrichous families. These cirri are used together with new morphogenetic features for a revised family diagnosis. The analysis of the Urostylidae revealed that during division all species of the family Urostylidae develop their cirral patterns, including the two rightmost ventral anlagen, in separate areas for each proter and opisthe. Thus, "long primary primordia" are absent in the Urostylidae. This is similar to the morphogenetic pattern by which the family Parakahliellidae is defined ("neokinetal 1") indicating that the Urostylidae are more closely related to the Parakahliellidae than to either the Oxytrichidae or to the Orthoamphisiellidae. All 68 detailed descriptions of divisional morphogenesis in species of the Hypotrichida are analyzed now in this and two former papers. As a result all these species can be assigned or at least recognized to be closely related to one of the following four families: to the Orthoamphisiellidae ("within-row" anlagen), to the Oxytrichidae ("neokinetal 3" anlagen), to the Parakahliellidae ("neokinetal 1" anlagen), and to the distinctly different Urostylidae ("midventral" anlagen). Thus, all Hypotrichida can most probably be assigned after morphogenetic investigation to one of the four families.

Infraciliature and morphogenesis of Paraholosticha sterkii (Garnjobst, 1934) n. comb. (Ciliophora, Hypotrichida)

The infraciliature and morphogenesis of Paraholosticha sterkii (Garnjobst, 1934) n. comb. (Basionym: Stylonethes sterkii) are described. Before division a cell encysts and after division each tomite forms an individual cyst within the common one. The ciliates cease to move and the kinetome is resorbed. With the beginning of morphogenesis new kinetosomes appear and an oral primordium is formed, where the differentiation of adoral membranelles is visible at an early state. At the same time the anlagen of the marginal rows of cirri, of the undulating membranes and the fronto-ventral complex of cirri develop. After differentiation of the kinetome the tomites hatch. If food is removed P. sterkii forms resting cysts. Encystation and excystation can be induced experimentally. The morphogenesis during excystation is apparently identical to the morphogenesis after division. It is synchronous in 80 to 90% of the cells. Paraholosticha Kahl, 1932 is separated from Keronopsis Penard, 1922 by the possession of transverse cirri. Thus, the species investigated is a typical representative of the genus Paraholosticha.