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Suzawa T, Iwama R, Fukuda R, Horiuchi H. Phosphatidylcholine levels regulate hyphal elongation and differentiation in the filamentous fungus Aspergillus oryzae. Sci Rep 2024; 14:11729. [PMID: 38778216 PMCID: PMC11111764 DOI: 10.1038/s41598-024-62580-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Accepted: 05/20/2024] [Indexed: 05/25/2024] Open
Abstract
Filamentous fungi are eukaryotic microorganisms that differentiate into diverse cellular forms. Recent research demonstrated that phospholipid homeostasis is crucial for the morphogenesis of filamentous fungi. However, phospholipids involved in the morphological regulation are yet to be systematically analyzed. In this study, we artificially controlled the amount of phosphatidylcholine (PC), a primary membrane lipid in many eukaryotes, in a filamentous fungus Aspergillus oryzae, by deleting the genes involved in PC synthesis or by repressing their expression. Under the condition where only a small amount of PC was synthesized, A. oryzae hardly formed aerial hyphae, the basic structures for asexual development. In contrast, hyphae were formed on the surface or in the interior of agar media (we collectively called substrate hyphae) under the same conditions. Furthermore, we demonstrated that supplying sufficient choline to the media led to the formation of aerial hyphae from the substrate hyphae. We suggested that acyl chains in PC were shorter in the substrate hyphae than in the aerial hyphae by utilizing the strain in which intracellular PC levels were controlled. Our findings suggested that the PC levels regulate hyphal elongation and differentiation processes in A. oryzae and that phospholipid composition varied depending on the hyphal types.
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Affiliation(s)
- Tetsuki Suzawa
- Department of Biotechnology, The University of Tokyo, Yayoi 1-1-1, Bunkyo-Ku, Tokyo, 113-8657, Japan
| | - Ryo Iwama
- Department of Biotechnology, The University of Tokyo, Yayoi 1-1-1, Bunkyo-Ku, Tokyo, 113-8657, Japan
- Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Yayoi 1-1-1, Bunkyo-Ku, Tokyo, 113-8657, Japan
| | - Ryouichi Fukuda
- Department of Biotechnology, The University of Tokyo, Yayoi 1-1-1, Bunkyo-Ku, Tokyo, 113-8657, Japan
- Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Yayoi 1-1-1, Bunkyo-Ku, Tokyo, 113-8657, Japan
| | - Hiroyuki Horiuchi
- Department of Biotechnology, The University of Tokyo, Yayoi 1-1-1, Bunkyo-Ku, Tokyo, 113-8657, Japan.
- Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Yayoi 1-1-1, Bunkyo-Ku, Tokyo, 113-8657, Japan.
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Senik SV, Manzhieva BS, Maloshenok LG, Serebryakov EB, Bruskin SA, Kotlova ER. Heterogeneous Distribution of Phospholipid Molecular Species in the Surface Culture of Flammulina velutipes: New Facts about Lipids Containing α-Linolenic Fatty Acid. J Fungi (Basel) 2023; 9:102. [PMID: 36675923 PMCID: PMC9865325 DOI: 10.3390/jof9010102] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 01/08/2023] [Accepted: 01/09/2023] [Indexed: 01/15/2023] Open
Abstract
Mycelial fungi grow as colonies consisting of polar growing hyphae, developing radially from spore or inoculum. Over time, the colony develops, hyphae are subject to various exogenous or endogenous stimuli, and mycelium becomes heterogeneous in growth, gene expression, biosynthesis, and secretion of proteins and metabolites. Although the biochemical and molecular mechanisms of mycelium heterogeneity have been the subject of many studies, the role of lipids in colony development and zonality is still not understood. This work was undertaken to extend our knowledge of mycelium heterogeneity and to answer the question of how different lipid molecular species are distributed in the surface colony of the basidial fungus Flammulina velutipes and how this distribution correlates with its morphology. The heterogeneity in the lipid metabolism and lipid composition of the fungal mycelium was demonstrated. According to the real-time PCR and LC-MS/MS results, the expression of genes of PC metabolism, accumulation of phospholipid classes, and degree of unsaturation of PC and PE increased in the direction from the center to the periphery of the colony. The peripheral zone of the colony was characterized by a higher value of the PC/PE ratio and a higher level of phospholipids esterified by linolenic acid. Considering that the synthesis of phospholipids in fungi occurs in different ways, we also conducted experiments with deuterium-labeled phospholipid precursors and found out that the Kennedy pathway is the predominant route for PC biosynthesis in F. velutipes. The zonal differences in gene expression and lipid composition can be explained by the participation of membrane lipids in polar growth maintenance and regulation.
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Affiliation(s)
- Svetlana V. Senik
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376 St. Petersburg, Russia
| | - Bairta S. Manzhieva
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376 St. Petersburg, Russia
| | - Liliya G. Maloshenok
- Vavilov Institute of General Genetics of the Russian Academy of Sciences, 117971 Moscow, Russia
| | - Evgeny B. Serebryakov
- Chemical Analysis and Materials Research Center, St. Petersburg State University, 198504 St. Petersburg, Russia
| | - Sergey A. Bruskin
- Vavilov Institute of General Genetics of the Russian Academy of Sciences, 117971 Moscow, Russia
| | - Ekaterina R. Kotlova
- Komarov Botanical Institute of the Russian Academy of Sciences, 197376 St. Petersburg, Russia
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Kotlova ER, Senik SV, Manzhieva BS, Kiyashko AA, Shakhova NV, Puzansky RK, Volobuev SV, Misharev AD, Serebryakov EB, Psurtseva NV. Diversity of ESI-MS Based Phosphatidylcholine Profiles in Basidiomycetes. J Fungi (Basel) 2022; 8:177. [PMID: 35205932 PMCID: PMC8879007 DOI: 10.3390/jof8020177] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Revised: 02/09/2022] [Accepted: 02/09/2022] [Indexed: 01/27/2023] Open
Abstract
Phosphatidylcholines (PC) are the main membrane lipid constituents comprising more than 50% of total glycerophospholipids. They coordinate a number of cell functions, particularly cell growth, homeostasis, secretion, recognition and communication. In basidial fungi PC are synthesized via the Kennedy pathway as well as through methylation of phosphatidylethanolamines (PE) and then undergo remodeling in Lands cycle that replaces fatty acids in PC molecules. The molecular profile of PC is determined by the genetic features that are characteristic for every species and depend on the environment. Here we present the results of ESI-MS based analyses of PC profiles of 38 species of basidiomycetes belonging to Agaricales (12), Polyporales (17), Russulales (5), Gleophyllales (2), Cantharellales (1), Auriculariales (1), Phallales (1). Although the variety of PC molecular species of basidiomycetes is rather diverse (20-38 molecular species in every profile), only 1-3 main molecular species represent 70-90% of total PC content. The most abundant of them are C36:4 and C36:3, followed by C34:1, C34:2, C36:5, C36:2. In the majority of basidiomycetes, C36:4 reaches up to 50-70% of total PC molecular species. Based on the results of hierarchical cluster analysis four main types of PC profiles which characterized the studied fungi independently from their taxonomic position, ecology, trophic status, and hyphal differentiation have been revealed. Comparative analyses of studied fungi using PCA method have shown that species of Polyporales differ from those of Agaricales by higher variability of PC profiles.
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Affiliation(s)
- Ekaterina R. Kotlova
- Komarov Botanical Institute, Russian Academy of Sciences RAS, 197376 Saint-Petersburg, Russia; (S.V.S.); (B.S.M.); (A.A.K.); (N.V.S.); (R.K.P.); (S.V.V.); (N.V.P.)
| | - Svetlana V. Senik
- Komarov Botanical Institute, Russian Academy of Sciences RAS, 197376 Saint-Petersburg, Russia; (S.V.S.); (B.S.M.); (A.A.K.); (N.V.S.); (R.K.P.); (S.V.V.); (N.V.P.)
| | - Bairta S. Manzhieva
- Komarov Botanical Institute, Russian Academy of Sciences RAS, 197376 Saint-Petersburg, Russia; (S.V.S.); (B.S.M.); (A.A.K.); (N.V.S.); (R.K.P.); (S.V.V.); (N.V.P.)
| | - Anna A. Kiyashko
- Komarov Botanical Institute, Russian Academy of Sciences RAS, 197376 Saint-Petersburg, Russia; (S.V.S.); (B.S.M.); (A.A.K.); (N.V.S.); (R.K.P.); (S.V.V.); (N.V.P.)
| | - Natalia V. Shakhova
- Komarov Botanical Institute, Russian Academy of Sciences RAS, 197376 Saint-Petersburg, Russia; (S.V.S.); (B.S.M.); (A.A.K.); (N.V.S.); (R.K.P.); (S.V.V.); (N.V.P.)
| | - Roman K. Puzansky
- Komarov Botanical Institute, Russian Academy of Sciences RAS, 197376 Saint-Petersburg, Russia; (S.V.S.); (B.S.M.); (A.A.K.); (N.V.S.); (R.K.P.); (S.V.V.); (N.V.P.)
| | - Sergei V. Volobuev
- Komarov Botanical Institute, Russian Academy of Sciences RAS, 197376 Saint-Petersburg, Russia; (S.V.S.); (B.S.M.); (A.A.K.); (N.V.S.); (R.K.P.); (S.V.V.); (N.V.P.)
| | - Alexander D. Misharev
- Chemical Analysis and Materials Research Centre, Saint-Petersburg State University, 198504 Saint-Petersburg, Russia; (A.D.M.); (E.B.S.)
| | - Eugeny B. Serebryakov
- Chemical Analysis and Materials Research Centre, Saint-Petersburg State University, 198504 Saint-Petersburg, Russia; (A.D.M.); (E.B.S.)
| | - Nadezhda V. Psurtseva
- Komarov Botanical Institute, Russian Academy of Sciences RAS, 197376 Saint-Petersburg, Russia; (S.V.S.); (B.S.M.); (A.A.K.); (N.V.S.); (R.K.P.); (S.V.V.); (N.V.P.)
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Akhberdi O, Zhang Q, Wang H, Li Y, Chen L, Wang D, Yu X, Wei D, Zhu X. Roles of phospholipid methyltransferases in pycnidia development, stress tolerance and secondary metabolism in the taxol-producing fungus Pestalotiopsis microspore. Microbiol Res 2018; 210:33-42. [DOI: 10.1016/j.micres.2018.03.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2017] [Revised: 11/27/2017] [Accepted: 03/03/2018] [Indexed: 01/15/2023]
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Choy V, Patel N, Thibault J. Application of image analysis in the fungal fermentation of Trichoderma reesei RUT-C30. Biotechnol Prog 2011; 27:1544-53. [DOI: 10.1002/btpr.667] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2010] [Revised: 05/20/2011] [Indexed: 11/12/2022]
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Kotlova ER, Senik SV, Kücher T, Shavarda AL, Kiyashko AA, Psurtseva NV, Sinyutina NF, Zubarev RA. Alterations in the composition of membrane glycero-and sphingolipids in the course of Flammulina velutipes surface culture development. Microbiology (Reading) 2009. [DOI: 10.1134/s002626170902009x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Dynesen J, Nielsen J. Branching is coordinated with mitosis in growing hyphae of Aspergillus nidulans. Fungal Genet Biol 2003; 40:15-24. [PMID: 12948510 DOI: 10.1016/s1087-1845(03)00053-7] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Filamentous fungi like Aspergillus nidulans can effectively colonize their surroundings by the formation of new branches along the existing hyphae. While growth conditions, chemical perturbations, and mutations affecting branch formation have received great attention during the last decades, the mechanisms that regulates branching is still poorly understood. In this study, a possible relation between cell cycle progression and branching was studied by testing the effect of a nuclei distribution mutation, cell cycle inhibitors, and conditional cell cycle mutations in combination with tip-growth inhibitors and varying substrate concentrations on branch initiation. Formation of branches was blocked after inhibition of nuclear division, which was not caused by a reduced growth rate. In hyphae of a nuclei distribution mutant branching was severely reduced in anucleated hyphae whereas the number of branches per hyphal length was linearly correlated to the concentration of nuclei, in the nucleated hyphae. In wild type cells, branching intensity was increased when the tip extension was reduced, and reduced when growing on poor substrates. In these situations, the hyphal concentration of nuclei was maintained and it is suggested that branching is correlated to cell cycle progression in order to maintain a minimum required cytoplasmic volume per nucleus and to avoid the formation of anucleated hyphae in the absence of nuclear divisions. The presented results further suggest the hyphal diameter as a key point through which the hyphal element regulates its branching intensity in response to the surrounding substrate concentrations.
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Affiliation(s)
- Jens Dynesen
- Center for Process Biotechnology, Biocentrum-DTU, Building 223, Technical University of Denmark, Lyngby 2800, Denmark
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Machida S, Todoriki S, Hamamatsu S, Saito M. Phospholipid requirements of membrane-bound chitin synthase fromAbsidia glauca. FEMS Microbiol Lett 1994. [DOI: 10.1111/j.1574-6968.1994.tb06644.x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
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Markham P, Robson GD, Bainbridge BW, Trinci AP. Choline: its role in the growth of filamentous fungi and the regulation of mycelial morphology. FEMS Microbiol Rev 1993; 10:287-300. [PMID: 8318261 DOI: 10.1111/j.1574-6968.1993.tb05872.x] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
Choline is an essential metabolite for the growth of filamentous fungi. It occurs most notably as a component of the major membrane phospholipid, phosphatidyl choline (lecithin), and fulfills a major role in sulphate metabolism in the form of choline-o-sulphate in many species. Choline is usually synthesised endogenously, but exogenous choline can also be taken up, either to compensate for metabolic deficiencies in choline-requiring mutants such as those of Aspergillus nidulans and Neurospora crassa, or as a normal function by species such as Fusarium graminearum which do not require added choline for growth. F. graminearum has a highly specific constitutive uptake system for this purpose. Recent studies have begun to indicate that choline also plays an important role in hyphal and mycelial morphology. Over a wide range of concentrations, choline influences mycelial morphology, apparently by controlling branch initiation. At high concentrations of added choline, branching is inhibited but specific growth rate is unaffected, leading to the production of rapidly extending, sparsely branched mycelia. Reduction of choline concentration allows a progressive increase in branching. Additionally, in choline-requiring mutants which have a very reduced content of choline, multiple tip-formation and apical branching occurs. Just prior to cessation of growth in choline-starved cultures of A. nidulans choline-requiring mutants, hyphal morphology changes due to a brief phase of unpolarised growth to produce spherical swellings called balloons, at or near hyphal apices. The precise mechanism by which choline affects fungal morphology is not yet known, although in A. nidulans it appears to be at least partially due to the influence of membrane composition on the synthesis of the hyphal wall polymer chitin. Several hypotheses for the possible mode of action of choline in affecting fungal morphology are discussed here.
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Affiliation(s)
- P Markham
- Microbiology Department, King's College, London, UK
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