1
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Boman J, Wiklund C, Vila R, Backström N. Meiotic drive against chromosome fusions in butterfly hybrids. Chromosome Res 2024; 32:7. [PMID: 38702576 PMCID: PMC11068667 DOI: 10.1007/s10577-024-09752-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Revised: 04/21/2024] [Accepted: 04/30/2024] [Indexed: 05/06/2024]
Abstract
Species frequently differ in the number and structure of chromosomes they harbor, but individuals that are heterozygous for chromosomal rearrangements may suffer from reduced fitness. Chromosomal rearrangements like fissions and fusions can hence serve as a mechanism for speciation between incipient lineages, but their evolution poses a paradox. How can rearrangements get fixed between populations if heterozygotes have reduced fitness? One solution is that this process predominantly occurs in small and isolated populations, where genetic drift can override natural selection. However, fixation is also more likely if a novel rearrangement is favored by a transmission bias, such as meiotic drive. Here, we investigate chromosomal transmission distortion in hybrids between two wood white (Leptidea sinapis) butterfly populations with extensive karyotype differences. Using data from two different crossing experiments, we uncover that there is a transmission bias favoring the ancestral chromosomal state for derived fusions, a result that shows that chromosome fusions actually can fix in populations despite being counteracted by meiotic drive. This means that meiotic drive not only can promote runaway chromosome number evolution and speciation, but also that it can be a conservative force acting against karyotypic change and the evolution of reproductive isolation. Based on our results, we suggest a mechanistic model for why chromosome fusion mutations may be opposed by meiotic drive and discuss factors contributing to karyotype evolution in Lepidoptera.
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Affiliation(s)
- Jesper Boman
- Evolutionary Biology Program, Department of Ecology and Genetics (IEG), Uppsala University, Norbyvägen 18D, SE-752 36, Uppsala, Sweden.
| | - Christer Wiklund
- Department of Zoology: Division of Ecology, Stockholm University, Stockholm, Sweden
| | - Roger Vila
- Institut de Biologia Evolutiva (CSIC-Univ. Pompeu Fabra), Passeig Marítim de La Barceloneta 37-49, 08003, Barcelona, Spain
| | - Niclas Backström
- Evolutionary Biology Program, Department of Ecology and Genetics (IEG), Uppsala University, Norbyvägen 18D, SE-752 36, Uppsala, Sweden
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2
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Xiang Y, Tsuchiya D, Yu Z, Zhao X, McKinney S, Unruh J, Slaughter B, Lake CM, Hawley RS. Multiple reorganizations of the lateral elements of the synaptonemal complex facilitate homolog segregation in Bombyx mori oocytes. Curr Biol 2024; 34:352-360.e4. [PMID: 38176417 DOI: 10.1016/j.cub.2023.12.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 11/29/2023] [Accepted: 12/07/2023] [Indexed: 01/06/2024]
Abstract
Although Lepidopteran females build a synaptonemal complex (SC) in pachytene, homologs do not crossover, necessitating an alternative method of homolog conjunction. In Bombyx mori oocytes, the SC breaks down at the end of pachytene, and homolog associations are maintained by a large oocyte-specific structure, which we call the bivalent bridge (BB), connecting paired homologs. The BB is derived from at least some components of the SC lateral elements (LEs). It contains the HORMAD protein HOP1 and the LE protein SYCP2 and is formed by the fusion of the two LE derivatives. As diplotene progresses, the BB increases in width and acquires a layered structure with a thick band of HOP1 separating two layers of SYCP2. The HOP1 interacting protein, PCH2, joins the BB in mid-diplotene, and by late-diplotene, it lies in the middle of the HOP1 filament. This structure is maintained through metaphase I. SYCP2 and PCH2 are lost at anaphase I, and the BB no longer connects the separating homologs. However, a key component of the BB, HOP1, remains at the metaphase I plate. These changes in organization of the BB occur simultaneously with the movement of the kinetochore protein, DSN1, from within the BB at mid-diplotene to the edge of the homologs facing the poles by metaphase I. We view these data in context of models in which SC components and regulators can be repurposed to achieve different functions, a fascinating example of evolution achieving homolog conjunction in an alternative way with recycling of SC proteins.
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Affiliation(s)
- Youbin Xiang
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA
| | - Dai Tsuchiya
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA
| | - Zulin Yu
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA
| | - Xia Zhao
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA
| | - Sean McKinney
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA
| | - Jay Unruh
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA
| | - Brian Slaughter
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA
| | - Cathleen M Lake
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA
| | - R Scott Hawley
- Stowers Institute for Medical Research, 1000 E. 50th Street, Kansas City, MO 64110, USA; Department of Molecular and Integrative Physiology, University of Kansas Medical Center, 3901 Rainbow Boulevard, Kansas City, MO 66160, USA.
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3
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Smith DA, Bennie JJ, Gordon IJ, Martin S, Ireri P, Omufwoko KS, Ffrench-Constant RH. Hybrid effects in field populations of the African monarch butterfly, Danaus chrysippus (L.) (Lepidoptera: Nymphalidae). Biol J Linn Soc Lond 2021; 133:671-684. [PMID: 34539176 PMCID: PMC8444992 DOI: 10.1093/biolinnean/blab036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2021] [Revised: 02/13/2021] [Accepted: 02/13/2021] [Indexed: 11/28/2022]
Abstract
Heterosis, Haldane and Bateson-Dobzhansky-Muller effects have been widely documented amongst a range of plants and animals. However, typically these effects are shown by taking parents of known genotype into the laboratory and measuring components of the F1 progeny under laboratory conditions. This leaves in doubt the real significance of such effects in the field. Here we use the well-known colour pattern genotypes of the African monarch or queen (Danaus chrysippus), which also control wing length, to test these effects both in the laboratory and in a contact zone in the field. By measuring the wing lengths in animals of known colour pattern genotype we show clear evidence for all three hybrid effects at the A and BC colour patterning loci, and importantly, that these same effects persist in the same presumptive F1s when measured in hybrid populations in the field. This demonstrates the power of a system in which genotypes can be directly inferred in the field and highlights that all three hybrid effects can be seen in the East African contact zone of this fascinating butterfly.
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Affiliation(s)
- David As Smith
- Natural History Museum, Eton College, Windsor SL4 6DW, UK
| | - Jon J Bennie
- Department of Geography, University of Exeter, Penryn Campus, Penryn TR10 9FE, UK
| | - Ian J Gordon
- Centre of Excellence in Biodiversity and Natural Resource Management, RN1, Huye Campus, Huye, Rwanda
| | - Simon Martin
- Institute of Evolutionary Biology, University of Edinburgh, Edinburgh EH1 3FL, UK
| | - Piera Ireri
- Department of Zoological Sciences, Kenyatta University, Nairobi, P.O. Box 43844-00100, Kenya
| | - Kennedy S Omufwoko
- Mpala Research Centre (Princeton University), Nanyuki, P.O. Box 555-10400, Kenya
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
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4
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Boman J, Mugal CF, Backström N. The Effects of GC-Biased Gene Conversion on Patterns of Genetic Diversity among and across Butterfly Genomes. Genome Biol Evol 2021; 13:evab064. [PMID: 33760095 PMCID: PMC8175052 DOI: 10.1093/gbe/evab064] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/22/2021] [Indexed: 12/28/2022] Open
Abstract
Recombination reshuffles the alleles of a population through crossover and gene conversion. These mechanisms have considerable consequences on the evolution and maintenance of genetic diversity. Crossover, for example, can increase genetic diversity by breaking the linkage between selected and nearby neutral variants. Bias in favor of G or C alleles during gene conversion may instead promote the fixation of one allele over the other, thus decreasing diversity. Mutation bias from G or C to A and T opposes GC-biased gene conversion (gBGC). Less recognized is that these two processes may-when balanced-promote genetic diversity. Here, we investigate how gBGC and mutation bias shape genetic diversity patterns in wood white butterflies (Leptidea sp.). This constitutes the first in-depth investigation of gBGC in butterflies. Using 60 resequenced genomes from six populations of three species, we find substantial variation in the strength of gBGC across lineages. When modeling the balance of gBGC and mutation bias and comparing analytical results with empirical data, we reject gBGC as the main determinant of genetic diversity in these butterfly species. As alternatives, we consider linked selection and GC content. We find evidence that high values of both reduce diversity. We also show that the joint effects of gBGC and mutation bias can give rise to a diversity pattern which resembles the signature of linked selection. Consequently, gBGC should be considered when interpreting the effects of linked selection on levels of genetic diversity.
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Affiliation(s)
- Jesper Boman
- Evolutionary Biology Program, Department of Ecology and Genetics (IEG), Uppsala University, Sweden
| | - Carina F Mugal
- Evolutionary Biology Program, Department of Ecology and Genetics (IEG), Uppsala University, Sweden
| | - Niclas Backström
- Evolutionary Biology Program, Department of Ecology and Genetics (IEG), Uppsala University, Sweden
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Bainbridge HE, Brien MN, Morochz C, Salazar PA, Rastas P, Nadeau NJ. Limited genetic parallels underlie convergent evolution of quantitative pattern variation in mimetic butterflies. J Evol Biol 2020; 33:1516-1529. [DOI: 10.1111/jeb.13704] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Revised: 08/05/2020] [Accepted: 09/04/2020] [Indexed: 01/28/2023]
Affiliation(s)
- Hannah E. Bainbridge
- Department of Animal and Plant Sciences The University of Sheffield Sheffield UK
| | - Melanie N. Brien
- Department of Animal and Plant Sciences The University of Sheffield Sheffield UK
| | - Carlos Morochz
- Biology & Research Department Mashpi Lodge Mashpi Ecuador
| | - Patricio A. Salazar
- Department of Animal and Plant Sciences The University of Sheffield Sheffield UK
| | - Pasi Rastas
- Institute of Biotechnology University of Helsinki Helsinki Finland
| | - Nicola J. Nadeau
- Department of Animal and Plant Sciences The University of Sheffield Sheffield UK
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7
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Talla V, Soler L, Kawakami T, Dincă V, Vila R, Friberg M, Wiklund C, Backström N. Dissecting the Effects of Selection and Mutation on Genetic Diversity in Three Wood White (Leptidea) Butterfly Species. Genome Biol Evol 2019; 11:2875-2886. [PMID: 31580421 PMCID: PMC6795238 DOI: 10.1093/gbe/evz212] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/26/2019] [Indexed: 12/12/2022] Open
Abstract
The relative role of natural selection and genetic drift in evolution is a major topic of debate in evolutionary biology. Most knowledge spring from a small group of organisms and originate from before it was possible to generate genome-wide data on genetic variation. Hence, it is necessary to extend to a larger number of taxonomic groups, descriptive and hypothesis-based research aiming at understanding the proximate and ultimate mechanisms underlying both levels of genetic polymorphism and the efficiency of natural selection. In this study, we used data from 60 whole-genome resequenced individuals of three cryptic butterfly species (Leptidea sp.), together with novel gene annotation information and population recombination data. We characterized the overall prevalence of natural selection and investigated the effects of mutation and linked selection on regional variation in nucleotide diversity. Our analyses showed that genome-wide diversity and rate of adaptive substitutions were comparatively low, whereas nonsynonymous to synonymous polymorphism and substitution levels were comparatively high in Leptidea, suggesting small long-term effective population sizes. Still, negative selection on linked sites (background selection) has resulted in reduced nucleotide diversity in regions with relatively high gene density and low recombination rate. We also found a significant effect of mutation rate variation on levels of polymorphism. Finally, there were considerable population differences in levels of genetic diversity and pervasiveness of selection against slightly deleterious alleles, in line with expectations from differences in estimated effective population sizes.
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Affiliation(s)
- Venkat Talla
- Department of Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Sweden
| | - Lucile Soler
- Department of Medical Biochemistry and Microbiology, National Bioinformatics Infrastructure Sweden (NBIS), Science for Life Laboratory, Uppsala, Sweden
| | - Takeshi Kawakami
- Department of Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Sweden
| | - Vlad Dincă
- Department of Ecology and Genetics, University of Oulu, Finland
| | - Roger Vila
- Institut de Biologia Evolutiva (CSIC-UPF), Barcelona, Spain
| | - Magne Friberg
- Department of Biology, Biodiversity Unit, Lund University, Sweden
| | - Christer Wiklund
- Department of Zoology, Division of Ecology, Stockholm University, Sweden
| | - Niclas Backström
- Department of Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Sweden
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Smith DAS, Traut W, Martin SH, Ireri P, Omufwoko KS, Ffrench-Constant R, Gordon IJ. Neo Sex Chromosomes, Colour Polymorphism and Male-Killing in the African Queen Butterfly, Danaus chrysippus (L.). INSECTS 2019; 10:E291. [PMID: 31505824 PMCID: PMC6780594 DOI: 10.3390/insects10090291] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 09/03/2019] [Accepted: 09/03/2019] [Indexed: 11/16/2022]
Abstract
Danaus chrysippus (L.), one of the world's commonest butterflies, has an extensive range throughout the Old-World tropics. In Africa it is divided into four geographical subspecies which overlap and hybridise freely in the East African Rift: Here alone a male-killing (MK) endosymbiont, Spiroplasma ixodetis, has invaded, causing female-biased populations to predominate. In ssp. chrysippus, inside the Rift only, an autosome carrying a colour locus has fused with the W chromosome to create a neo-W chromosome. A total of 40-100% of Rift females are neo-W and carry Spiroplasma, thus transmitting a linked, matrilineal neo-W, MK complex. As neo-W females have no sons, half the mother's genes are lost in each generation. Paradoxically, although neo-W females have no close male relatives and are thereby forced to outbreed, MK restricts gene flow between subspecies and may thus promote speciation. The neo-W chromosome originated in the Nairobi region around 2.2 k years ago and subsequently spread throughout the Rift contact zone in some 26 k generations, possibly assisted by not having any competing brothers. Our work on the neo-W chromosome, the spread of Spiroplasma and possible speciation is ongoing.
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Affiliation(s)
| | - Walther Traut
- Institut für Biologie, Zentrum für Medionische Struktur-und Zellbiologie, Universität zu Lübeck, Ratzeburger Allee 160, 23538 Lübeck, Germany.
| | - Simon H Martin
- Institute of Evolutionary Biology, University of Edinburgh, Edinburgh EH9 3FL, UK.
| | - Piera Ireri
- Department of Zoological Sciences, Kenyatta University, Nairobi P.O. Box 43844-00100, Kenya.
| | - Kennedy S Omufwoko
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA.
- Mpala Research Centre, Nanyuki P.O. Box 555-10400, Kenya.
| | | | - Ian J Gordon
- BirdLife International Kigali Office, Kigali Post Office, Kigali P.O. Box 2527, Rwanda.
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Quantitative Genetic Mapping and Genome Assembly in the Lesser Wax Moth Achroia grisella. G3-GENES GENOMES GENETICS 2019; 9:2349-2361. [PMID: 31101652 PMCID: PMC6643890 DOI: 10.1534/g3.119.400090] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Specific characteristics of the male Achroia grisella acoustic mating signal determine a male’s attractiveness toward females. These features are genetically variable in populations, and mapping experiments have been used to identify loci contributing to song variation, and understand the evolutionary forces acting on this important sexual trait. Here we built on this foundation and carried out QTL (Quantitative Trait Locus) mapping using >1,000 recombinant individuals, genotyping this large cohort at thousands of sequence-based markers covering the entire collection of 30 A. grisella chromosomes. This dense marker set, coupled with our development of an annotated, draft genome of A. grisella, allowed us to link >3,000 genome scaffolds, >10,000 predicted genes, and close to 275Mb of genome sequence to chromosomes. Our QTL mapping confirmed a fraction of the QTL identified in a previous study, and additionally revealed novel loci. Collectively, QTL explained only small fractions of the phenotypic variance, suggesting many more causative factors remain below the detection threshold of our study. A surprising, and ultimately challenging feature of our study was the low level of intrachromosomal recombination present in our mapping population. This led to difficulty ordering markers along linkage groups, necessitating a chromosome-by-chromosome mapping approach, rather than true interval mapping, and precluded confident ordering/orienting of scaffolds along each chromosome. Nonetheless, our study increased the genomic resources available for the A. grisella system. Enabled by ever more powerful technologies, future investigators will be able to leverage our data to provide more detailed genetic dissection of male song variation in A. grisella.
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10
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Insights into the Structure of the Spruce Budworm ( Choristoneura fumiferana) Genome, as Revealed by Molecular Cytogenetic Analyses and a High-Density Linkage Map. G3-GENES GENOMES GENETICS 2018; 8:2539-2549. [PMID: 29950429 PMCID: PMC6071596 DOI: 10.1534/g3.118.200263] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Genome structure characterization can contribute to a better understanding of processes such as adaptation, speciation, and karyotype evolution, and can provide useful information for refining genome assemblies. We studied the genome of an important North American boreal forest pest, the spruce budworm, Choristoneura fumiferana, through a combination of molecular cytogenetic analyses and construction of a high-density linkage map based on single nucleotide polymorphism (SNP) markers obtained through a genotyping-by-sequencing (GBS) approach. Cytogenetic analyses using fluorescence in situ hybridization methods confirmed the haploid chromosome number of n = 30 in both sexes of C. fumiferana and showed, for the first time, that this species has a WZ/ZZ sex chromosome system. Synteny analysis based on a comparison of the Bombyx mori genome and the C. fumiferana linkage map revealed the presence of a neo-Z chromosome in the latter species, as previously reported for other tortricid moths. In this neo-Z chromosome, we detected an ABC transporter C2 (ABCC2) gene that has been associated with insecticide resistance. Sex-linkage of the ABCC2 gene provides a genomic context favorable to selection and rapid spread of resistance against Bacillus thuringiensis serotype kurstaki (Btk), the main insecticide used in Canada to control spruce budworm populations. Ultimately, the linkage map we developed, which comprises 3586 SNP markers distributed over 30 linkage groups for a total length of 1720.41 cM, will be a valuable tool for refining our draft assembly of the spruce budworm genome.
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11
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Van Belleghem SM, Baquero M, Papa R, Salazar C, McMillan WO, Counterman BA, Jiggins CD, Martin SH. Patterns of Z chromosome divergence among Heliconius species highlight the importance of historical demography. Mol Ecol 2018; 27:3852-3872. [PMID: 29569384 PMCID: PMC6151167 DOI: 10.1111/mec.14560] [Citation(s) in RCA: 43] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2017] [Revised: 02/14/2018] [Accepted: 02/20/2018] [Indexed: 12/31/2022]
Abstract
Sex chromosomes are disproportionately involved in reproductive isolation and adaptation. In support of such a “large‐X” effect, genome scans between recently diverged populations and species pairs often identify distinct patterns of divergence on the sex chromosome compared to autosomes. When measures of divergence between populations are higher on the sex chromosome compared to autosomes, such patterns could be interpreted as evidence for faster divergence on the sex chromosome, that is “faster‐X”, barriers to gene flow on the sex chromosome. However, demographic changes can strongly skew divergence estimates and are not always taken into consideration. We used 224 whole‐genome sequences representing 36 populations from two Heliconius butterfly clades (H. erato and H. melpomene) to explore patterns of Z chromosome divergence. We show that increased divergence compared to equilibrium expectations can in many cases be explained by demographic change. Among Heliconius erato populations, for instance, population size increase in the ancestral population can explain increased absolute divergence measures on the Z chromosome compared to the autosomes, as a result of increased ancestral Z chromosome genetic diversity. Nonetheless, we do identify increased divergence on the Z chromosome relative to the autosomes in parapatric or sympatric species comparisons that imply postzygotic reproductive barriers. Using simulations, we show that this is consistent with reduced gene flow on the Z chromosome, perhaps due to greater accumulation of incompatibilities. Our work demonstrates the importance of taking demography into account to interpret patterns of divergence on the Z chromosome, but nonetheless provides evidence to support the Z chromosome as a strong barrier to gene flow in incipient Heliconius butterfly species.
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Affiliation(s)
- Steven M Van Belleghem
- Department of Zoology, University of Cambridge, Cambridge, UK.,Department of Biological Sciences, Mississippi State University, Mississippi State, MS, USA.,Department of Biology, Center for Applied Tropical Ecology and Conservation, University of Puerto Rico, Rio Piedras, Puerto Rico.,Smithsonian Tropical Research Institute, Apartado, Panamá, Panama
| | - Margarita Baquero
- Department of Biological Sciences, Mississippi State University, Mississippi State, MS, USA
| | - Riccardo Papa
- Department of Biology, Center for Applied Tropical Ecology and Conservation, University of Puerto Rico, Rio Piedras, Puerto Rico
| | - Camilo Salazar
- Biology Program, Faculty of Natural Sciences and Mathematics, Universidad del Rosario, Carrera, Bogota, Colombia
| | - W Owen McMillan
- Smithsonian Tropical Research Institute, Apartado, Panamá, Panama
| | - Brian A Counterman
- Department of Biological Sciences, Mississippi State University, Mississippi State, MS, USA
| | - Chris D Jiggins
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - Simon H Martin
- Department of Zoology, University of Cambridge, Cambridge, UK
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12
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Kozak GM, Wadsworth CB, Kahne SC, Bogdanowicz SM, Harrison RG, Coates BS, Dopman EB. A combination of sexual and ecological divergence contributes to rearrangement spread during initial stages of speciation. Mol Ecol 2017. [DOI: 10.111/mwc.1403610.1111/mec.14036] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Affiliation(s)
- Genevieve M. Kozak
- Department of Biology Tufts University 200 Boston Ave. Ste. 4700 Medford MA 02155 USA
| | - Crista B. Wadsworth
- Department of Biology Tufts University 200 Boston Ave. Ste. 4700 Medford MA 02155 USA
- Harvard TH Chan School of Public Health 677 Huntington Ave. Boston MA 02115 USA
| | - Shoshanna C. Kahne
- Department of Biology Tufts University 200 Boston Ave. Ste. 4700 Medford MA 02155 USA
| | - Steven M. Bogdanowicz
- Department of Ecology and Evolutionary Biology Cornell University 215 Tower Road Ithaca NY 14853 USA
| | - Richard G. Harrison
- Department of Ecology and Evolutionary Biology Cornell University 215 Tower Road Ithaca NY 14853 USA
| | - Brad S. Coates
- Corn Insects and Crop Genetics Research Unit USDA‐ARS Iowa State University 103 Genetics Laboratory Ames IA 50011 USA
| | - Erik B. Dopman
- Department of Biology Tufts University 200 Boston Ave. Ste. 4700 Medford MA 02155 USA
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13
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Kozak GM, Wadsworth CB, Kahne SC, Bogdanowicz SM, Harrison RG, Coates BS, Dopman EB. A combination of sexual and ecological divergence contributes to rearrangement spread during initial stages of speciation. Mol Ecol 2017; 26:2331-2347. [PMID: 28141898 DOI: 10.1111/mec.14036] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2016] [Revised: 12/12/2016] [Accepted: 01/10/2017] [Indexed: 01/04/2023]
Abstract
Chromosomal rearrangements between sympatric species often contain multiple loci contributing to assortative mating, local adaptation and hybrid sterility. When and how these associations arise during the process of speciation remains a subject of debate. Here, we address the relative roles of local adaptation and assortative mating on the dynamics of rearrangement evolution by studying how a rearrangement covaries with sexual and ecological trait divergence within a species. Previously, a chromosomal rearrangement that suppresses recombination on the Z (sex) chromosome was identified in European corn borer moths (Ostrinia nubilalis). We further characterize this recombination suppressor and explore its association with variation in sex pheromone communication and seasonal ecological adaptation in pairs of populations that are divergent in one or both of these characteristics. Direct estimates of recombination suppression in pedigree mapping families indicated that more than 39% of the Z chromosome (encompassing up to ~10 megabases and ~300 genes) resides within a nonrecombining unit, including pheromone olfactory receptor genes and a major quantitative trait locus that contributes to ecotype differences (Pdd). Combining direct and indirect estimates of recombination suppression, we found that the rearrangement was occasionally present between sexually isolated strains (E vs. Z) and between divergent ecotypes (univoltine vs. bivoltine). However, it was only consistently present when populations differed in both sexual and ecological traits. Our results suggest that independent of the forces that drove the initial establishment of the rearrangement, a combination of sexual and ecological divergence is required for rearrangement spread during speciation.
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Affiliation(s)
- Genevieve M Kozak
- Department of Biology, Tufts University, 200 Boston Ave. Ste. 4700, Medford, MA, 02155, USA
| | - Crista B Wadsworth
- Department of Biology, Tufts University, 200 Boston Ave. Ste. 4700, Medford, MA, 02155, USA.,Harvard TH Chan School of Public Health, 677 Huntington Ave., Boston, MA, 02115, USA
| | - Shoshanna C Kahne
- Department of Biology, Tufts University, 200 Boston Ave. Ste. 4700, Medford, MA, 02155, USA
| | - Steven M Bogdanowicz
- Department of Ecology and Evolutionary Biology, Cornell University, 215 Tower Road, Ithaca, NY, 14853, USA
| | - Richard G Harrison
- Department of Ecology and Evolutionary Biology, Cornell University, 215 Tower Road, Ithaca, NY, 14853, USA
| | - Brad S Coates
- Corn Insects and Crop Genetics Research Unit, USDA-ARS, Iowa State University, 103 Genetics Laboratory, Ames, IA, 50011, USA
| | - Erik B Dopman
- Department of Biology, Tufts University, 200 Boston Ave. Ste. 4700, Medford, MA, 02155, USA
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14
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Rousselle M, Faivre N, Ballenghien M, Galtier N, Nabholz B. Hemizygosity Enhances Purifying Selection: Lack of Fast-Z Evolution in Two Satyrine Butterflies. Genome Biol Evol 2016; 8:3108-3119. [PMID: 27590089 PMCID: PMC5174731 DOI: 10.1093/gbe/evw214] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
The fixation probability of a recessive beneficial mutation is increased on the X or Z chromosome, relative to autosomes, because recessive alleles carried by X or Z are exposed to selection in the heterogametic sex. This leads to an increased dN/dS ratio on sex chromosomes relative to autosomes, a pattern called the “fast-X” or “fast-Z” effect. Besides positive selection, the strength of genetic drift and the efficacy of purifying selection, which affect the rate of molecular evolution, might differ between sex chromosomes and autosomes. Disentangling the complex effects of these distinct forces requires the genome-wide analysis of polymorphism, divergence and gene expression data in a variety of taxa. Here we study the influence of hemizygosity of the Z chromosome in Maniola jurtina and Pyronia tithonus, two species of butterflies (Lepidoptera, Nymphalidae, Satyrinae). Using transcriptome data, we compare the strength of positive and negative selection between Z and autosomes accounting for sex-specific gene expression. We show that M. jurtina and P. tithonus do not experience a faster, but rather a slightly slower evolutionary rate on the Z than on autosomes. Our analysis failed to detect a significant difference in adaptive evolutionary rate between Z and autosomes, but comparison of male-biased, unbiased and female-biased Z-linked genes revealed an increased efficacy of purifying selection against recessive deleterious mutations in female-biased Z-linked genes. This probably contributes to the lack of fast-Z evolution of satyrines. We suggest that the effect of hemizygosity on the fate of recessive deleterious mutations should be taken into account when interpreting patterns of molecular evolution in sex chromosomes vs. autosomes.
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Affiliation(s)
- Marjolaine Rousselle
- UMR 5554 Institut des Sciences de l'Evolution, CNRS, Université de Montpellier, IRD, EPHE, Place E. Bataillon, Montpellier, France
| | - Nicolas Faivre
- UMR 5554 Institut des Sciences de l'Evolution, CNRS, Université de Montpellier, IRD, EPHE, Place E. Bataillon, Montpellier, France
| | - Marion Ballenghien
- UMR 5554 Institut des Sciences de l'Evolution, CNRS, Université de Montpellier, IRD, EPHE, Place E. Bataillon, Montpellier, France
| | - Nicolas Galtier
- UMR 5554 Institut des Sciences de l'Evolution, CNRS, Université de Montpellier, IRD, EPHE, Place E. Bataillon, Montpellier, France
| | - Benoit Nabholz
- UMR 5554 Institut des Sciences de l'Evolution, CNRS, Université de Montpellier, IRD, EPHE, Place E. Bataillon, Montpellier, France
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15
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Wright AE, Dean R, Zimmer F, Mank JE. How to make a sex chromosome. Nat Commun 2016; 7:12087. [PMID: 27373494 PMCID: PMC4932193 DOI: 10.1038/ncomms12087] [Citation(s) in RCA: 152] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2016] [Accepted: 05/27/2016] [Indexed: 12/19/2022] Open
Abstract
Sex chromosomes can evolve once recombination is halted between a homologous pair of chromosomes. Owing to detailed studies using key model systems, we have a nuanced understanding and a rich review literature of what happens to sex chromosomes once recombination is arrested. However, three broad questions remain unanswered. First, why do sex chromosomes stop recombining in the first place? Second, how is recombination halted? Finally, why does the spread of recombination suppression, and therefore the rate of sex chromosome divergence, vary so substantially across clades? In this review, we consider each of these three questions in turn to address fundamental questions in the field, summarize our current understanding, and highlight important areas for future work. Sex chromosome evolution begins when recombination between a homologous pair of chromosomes is halted. Here, Wright et al. review our current understanding of the causes and mechanisms of recombination suppression between incipient sex chromosomes and suggest future directions for the field.
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Affiliation(s)
- Alison E. Wright
- Department of Genetics, Evolution and Environment University College London, London WC1E 6BT UK
| | - Rebecca Dean
- Department of Genetics, Evolution and Environment University College London, London WC1E 6BT UK
| | - Fabian Zimmer
- Department of Genetics, Evolution and Environment University College London, London WC1E 6BT UK
| | - Judith E. Mank
- Department of Genetics, Evolution and Environment University College London, London WC1E 6BT UK
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16
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Rasool A, Joußen N, Lorenz S, Ellinger R, Schneider B, Khan SA, Ashfaq M, Heckel DG. An independent occurrence of the chimeric P450 enzyme CYP337B3 of Helicoverpa armigera confers cypermethrin resistance in Pakistan. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2014; 53:54-65. [PMID: 25064010 DOI: 10.1016/j.ibmb.2014.07.006] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2014] [Revised: 07/08/2014] [Accepted: 07/11/2014] [Indexed: 05/26/2023]
Abstract
The increasing resistance level of insect pest species is a major concern to agriculture worldwide. The cotton bollworm, Helicoverpa armigera, is one of the most important pest species due to being highly polyphagous, geographically widespread, and resistant towards many chemical classes of insecticides. We previously described the mechanism of fenvalerate resistance in Australian populations conferred by the chimeric cytochrome P450 monooxygenase CYP337B3, which arose by unequal crossing-over between CYP337B1 and CYP337B2. Here, we show that this mechanism is also present in the cypermethrin-resistant FSD strain from Pakistan. The Pakistani and the Australian CYP337B3 alleles differ by 18 synonymous and three nonsynonymous SNPs and additionally in the length and sequence of the intron. Nevertheless, the activity of both CYP337B3 proteins is comparable. We demonstrate that CYP337B3 is capable of metabolizing cypermethrin (trans- and especially cis-isomers) to the main metabolite 4'-hydroxycypermethrin, which exhibits no intrinsic toxicity towards susceptible larvae. In a bioassay, CYP337B3 confers a 7-fold resistance towards cypermethrin in FSD larvae compared to susceptible larvae from the Australian TWB strain lacking CYP337B3. Linkage analysis shows that presence of CYP337B3 accounts for most of the cypermethrin resistance in the FSD strain; up-regulation of other P450s in FSD plays no detectable role in resistance. The presence or absence of CYP337B3 can be easily detected by a simple PCR screen, providing a powerful tool to rapidly distinguish resistant from susceptible individuals in the field and to determine the geographical distribution of this resistance gene. Our results suggest that CYP337B3 evolved twice independently by unequal crossing-over between CYP337B2 and two different CYP337B1 alleles.
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Affiliation(s)
- Akhtar Rasool
- Department of Entomology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, 07745 Jena, Germany.
| | - Nicole Joußen
- Department of Entomology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, 07745 Jena, Germany.
| | - Sybille Lorenz
- Research Group Mass Spectrometry, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, 07745 Jena, Germany.
| | - Renate Ellinger
- Research Group Biosynthesis/Nuclear Magnetic Resonance, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, 07745 Jena, Germany.
| | - Bernd Schneider
- Research Group Biosynthesis/Nuclear Magnetic Resonance, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, 07745 Jena, Germany.
| | - Sher Afzal Khan
- Department of Entomology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, 07745 Jena, Germany.
| | - Muhammad Ashfaq
- Insect Molecular Biology Lab, National Institute for Biotechnology and Genetic Engineering (NIBGE), P.O. Box 577, Jhang Road, Faisalabad, Pakistan.
| | - David G Heckel
- Department of Entomology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Str. 8, 07745 Jena, Germany.
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17
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Gordon IJ, Ireri P, Smith DAS. Hologenomic speciation: synergy between a male-killing bacterium and sex-linkage creates a ‘magic trait’ in a butterfly hybrid zone. Biol J Linn Soc Lond 2013. [DOI: 10.1111/bij.12185] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Ian J. Gordon
- Environmental Health Division; International Centre for Insect Physiology and Ecology (ICIPE); PO Box 30772-00100 Nairobi Kenya
- BirdLife International; Africa Partnership Secretariat; PO Box 3502-00100 Nairobi Kenya
- Department of Entomology; National Museums of Kenya; PO Box 40658-00100 Nairobi Kenya
| | - Piera Ireri
- Environmental Health Division; International Centre for Insect Physiology and Ecology (ICIPE); PO Box 30772-00100 Nairobi Kenya
- Department of Zoological Sciences; Kenyatta University; Nairobi Kenya
| | - David A. S. Smith
- Environmental Health Division; International Centre for Insect Physiology and Ecology (ICIPE); PO Box 30772-00100 Nairobi Kenya
- Natural History Museum; Eton College; Windsor SL4 6EW UK
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18
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Carter JM, Baker SC, Pink R, Carter DRF, Collins A, Tomlin J, Gibbs M, Breuker CJ. Unscrambling butterfly oogenesis. BMC Genomics 2013; 14:283. [PMID: 23622113 PMCID: PMC3654919 DOI: 10.1186/1471-2164-14-283] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2013] [Accepted: 04/05/2013] [Indexed: 12/16/2022] Open
Abstract
Background Butterflies are popular model organisms to study physiological mechanisms
underlying variability in oogenesis and egg provisioning in response to
environmental conditions. Nothing is known, however, about; the
developmental mechanisms governing butterfly oogenesis, how polarity in the
oocyte is established, or which particular maternal effect genes regulate
early embryogenesis. To gain insights into these developmental mechanisms
and to identify the conserved and divergent aspects of butterfly oogenesis,
we analysed a de novo ovarian transcriptome of the Speckled Wood
butterfly Pararge aegeria (L.), and compared the results with known
model organisms such as Drosophila melanogaster and Bombyx
mori. Results A total of 17306 contigs were annotated, with 30% possibly novel or highly
divergent sequences observed. Pararge aegeria females expressed
74.5% of the genes that are known to be essential for D.
melanogaster oogenesis. We discuss the genes involved in all
aspects of oogenesis, including vitellogenesis and choriogenesis, plus those
implicated in hormonal control of oogenesis and transgenerational hormonal
effects in great detail. Compared to other insects, a number of significant
differences were observed in; the genes involved in stem cell maintenance
and differentiation in the germarium, establishment of oocyte polarity, and
in several aspects of maternal regulation of zygotic development. Conclusions This study provides valuable resources to investigate a number of divergent
aspects of butterfly oogenesis requiring further research. In order to fully
unscramble butterfly oogenesis, we also now also have the resources to
investigate expression patterns of oogenesis genes under a range of
environmental conditions, and to establish their function.
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Affiliation(s)
- Jean-Michel Carter
- Evolutionary Developmental Biology Research Group, Faculty of Health and Life Sciences, Department of Biological and Medical Sciences, Oxford Brookes University, Gipsy Lane, Headington, Oxford, OX3 0BP, UK
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19
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Papa R, Kapan DD, Counterman BA, Maldonado K, Lindstrom DP, Reed RD, Nijhout HF, Hrbek T, McMillan WO. Multi-allelic major effect genes interact with minor effect QTLs to control adaptive color pattern variation in Heliconius erato. PLoS One 2013; 8:e57033. [PMID: 23533571 PMCID: PMC3606360 DOI: 10.1371/journal.pone.0057033] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2012] [Accepted: 01/21/2013] [Indexed: 11/19/2022] Open
Abstract
Recent studies indicate that relatively few genomic regions are repeatedly involved in the evolution of Heliconius butterfly wing patterns. Although this work demonstrates a number of cases where homologous loci underlie both convergent and divergent wing pattern change among different Heliconius species, it is still unclear exactly how many loci underlie pattern variation across the genus. To address this question for Heliconius erato, we created fifteen independent crosses utilizing the four most distinct color pattern races and analyzed color pattern segregation across a total of 1271 F2 and backcross offspring. Additionally, we used the most variable brood, an F2 cross between H. himera and the east Ecuadorian H. erato notabilis, to perform a quantitative genetic analysis of color pattern variation and produce a detailed map of the loci likely involved in the H. erato color pattern radiation. Using AFLP and gene based markers, we show that fewer major genes than previously envisioned control the color pattern variation in H. erato. We describe for the first time the genetic architecture of H. erato wing color pattern by assessing quantitative variation in addition to traditional linkage mapping. In particular, our data suggest three genomic intervals modulate the bulk of the observed variation in color. Furthermore, we also identify several modifier loci of moderate effect size that contribute to the quantitative wing pattern variation. Our results are consistent with the two-step model for the evolution of mimetic wing patterns in Heliconius and support a growing body of empirical data demonstrating the importance of major effect loci in adaptive change.
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Affiliation(s)
- Riccardo Papa
- Department of Biology and Center for Applied Tropical Ecology and Conservation, University of Puerto Rico, Rio Piedras, Puerto Rico.
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20
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Jones RT, Salazar PA, ffrench-Constant RH, Jiggins CD, Joron M. Evolution of a mimicry supergene from a multilocus architecture. Proc Biol Sci 2012; 279:316-25. [PMID: 21676976 PMCID: PMC3223682 DOI: 10.1098/rspb.2011.0882] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2011] [Accepted: 05/26/2011] [Indexed: 11/12/2022] Open
Abstract
The origin and evolution of supergenes have long fascinated evolutionary biologists. In the polymorphic butterfly Heliconius numata, a supergene controls the switch between multiple different forms, and results in near-perfect mimicry of model species. Here, we use a morphometric analysis to quantify the variation in wing pattern observed in two broods of H. numata with different alleles at the supergene locus, 'P'. Further, we genotype the broods to associate the variation we capture with genetic differences. This allows us to begin mapping the quantitative trait loci that have minor effects on wing pattern. In addition to finding loci on novel chromosomes, our data, to our knowledge, suggest for the first time that ancestral colour-pattern loci, known to have major effects in closely related species, may contribute to the wing patterns displayed by H. numata, despite the large transfer of effects to the supergene.
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Affiliation(s)
- Robert T Jones
- School of Biosciences, University of Exeter, Penryn TR10 9EZ, UK.
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21
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22
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SMITH DAS. Heterosis, epistasis and linkage disequilibrium in a wild population of the polymorphic butterfly Danaus chrysippus (L.). Zool J Linn Soc 2008. [DOI: 10.1111/j.1096-3642.1980.tb01933.x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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23
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SMITH DAVIDA, OWEN DENISF, GORDON IANJ, LOWIS NINIANK. The butterfly Danaus chrysippus (L.) in East Africa: polymorphism and morph-ratio clines within a complex, extensive and dynamic hybrid zone. Zool J Linn Soc 2008. [DOI: 10.1111/j.1096-3642.1997.tb01272.x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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24
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NOKKALA SEPPO. Cytological characteristics of chromosome behaviour during female meiosis in Sphinx ligustri L. (Sphingidae, Lepidoptera). Hereditas 2008. [DOI: 10.1111/j.1601-5223.1987.tb00250.x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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25
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NOKKALA SEPPO, NOKKALA CHRISTINA. Achiasmatic male meiosis of collochore type in the heteropteran family Miridae. Hereditas 2008. [DOI: 10.1111/j.1601-5223.1986.tb00661.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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26
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NOKKALA SEPPO, NOKKALA CHRISTINA. Achiasmatic male meiosis in the Heteropteran genus Nabis (Nabidae, Hemiptera). Hereditas 2008. [DOI: 10.1111/j.1601-5223.1984.tb00445.x] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
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27
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Brown KS, Emmel TC, Eliazar PJ, Suomalainen E. Evolutionary patterns in chromosome numbers in neotropical Lepidoptera. I. Chromosomes of the Heliconiini (family Nymphalidae: subfamily Nymphalinae). Hereditas 2008; 117:109-25. [PMID: 1459855 DOI: 10.1111/j.1601-5223.1992.tb00165.x] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022] Open
Abstract
Chromosome counts in meiotic metaphase plates in the gonads of 67 of the probable 68 species of mimetic neotropical heliconian butterflies (Nymphalidae), representing 1524 individuals in 617 subspecies and geographically separate populations from southern Texas to northern Argentina, revealed a consistent haploid number of n = 21 in the genus Heliconius (except for the most advanced species with n = 33, 37, 56, and 60) and n = 31 in the more primitive genera (Eueides, Dryas, Dryadula, Agraulis, and Dione), with a transitional genus (Neruda) showing three species with n = 28-32, 21-22 + 5-10 "microchromosomes", and 20-22 + 1-5 "microchromosomes". The genus Laparus, with a single polymorphic species doris, probably an offshoot of early Heliconius, shows wide karyotypic variation (n = 20-30, 38) sometimes even within a single individual. The two most primitive genera also show much variation: Podotricha has two species with n = 9 and n = 26-29; and Philaethria shows many phenotypically similar species, two with n = 29 and a still uncertain number (at least 3) with n = 88 (most common), 67-72 (most widespread), 62 (very restricted geographically), 52, 21, and 12. Several interspecific hybrids (Heliconius cydno x H. melpomene) showed normal chromosome pairing, while deficient pairing was seen in intersubspecific hybrids in Eueides tales and Heliconius sara. The importance of these results in the evolutionary study of polytypic tropical species is discussed.
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Affiliation(s)
- K S Brown
- Departamento de Zoologia, Universidade Estadual de Campinas, São Paulo, Brazil
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28
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Smith DAS, Gordon IJ, Depew LA, Owen DF. Genetics of the butterfly Danaus chrysippus (L.) in a broad hybrid zone, with special reference to sex ratio, polymorphism and intragenomic conflict. Biol J Linn Soc Lond 2008. [DOI: 10.1111/j.1095-8312.1998.tb00349.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Joron M, Jiggins CD, Papanicolaou A, McMillan WO. Heliconius wing patterns: an evo-devo model for understanding phenotypic diversity. Heredity (Edinb) 2006; 97:157-67. [PMID: 16835591 DOI: 10.1038/sj.hdy.6800873] [Citation(s) in RCA: 94] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
Abstract
Evolutionary Developmental Biology aims for a mechanistic understanding of phenotypic diversity, and present knowledge is largely based on gene expression and interaction patterns from a small number of well-known model organisms. However, our understanding of biological diversification depends on our ability to pinpoint the causes of natural variation at a micro-evolutionary level, and therefore requires the isolation of genetic and developmental variation in a controlled genetic background. The colour patterns of Heliconius butterflies (Nymphalidae: Heliconiinae) provide a rich suite of naturally occurring variants with striking phenotypic diversity and multiple taxonomic levels of variation. Diversification in the genus is well known for its dramatic colour-pattern divergence between races or closely related species, and for Müllerian mimicry convergence between distantly related species, providing a unique system to study the development basis of colour-pattern evolution. A long history of genetic studies has showed that pattern variation is based on allelic combinations at a surprisingly small number of loci, and recent developmental evidence suggests that pattern development in Heliconius is different from the eyespot determination of other butterflies. Fine-scale genetic mapping studies have shown that a shared toolkit of genes is used to produce both convergent and divergent phenotypes. These exciting results and the development of new genomic resources make Heliconius a very promising evo-devo model for the study of adaptive change.
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Affiliation(s)
- M Joron
- Section of Evolutionary Biology, Institute of Biology, Leiden University, PO Box 9516, Leiden 2300 RA, The Netherlands.
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30
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Abstract
The color patterns on the wings of lepidopterans are among the most striking patterns in nature and have inspired diverse biological hypotheses such as the ecological role of aposomatic coloration, the evolution of mimicry, the role of human activities in industrial melanism, and the developmental basis of phenotypic plasticity. Yet, the developmental mechanisms underlying color pattern development are not well understood for three reasons. First, few mutations that alter color patterns have been characterized at the molecular level, so there is little mechanistic understanding of how mutant phenotypes are produced. Second, although gene expression patterns resembling adult color patterns are suggestive, there are few data available showing that gene products have a functional role in color pattern formation. Finally, because with few exceptions (notably Bombyx), genetic maps for most species of Lepidoptera are rudimentary or nonexistent, it is very difficult to characterize spontaneous mutants or to determine whether mutations with similar phenotypes are because of lesions in the same gene or different genes. Discussed here are two strategies for overcoming these difficulties: germ-line transformation of lepidopteran species using transposon vectors and amplified frequency length polymorphism-based genetic mapping using variation between divergent strains within a species or between closely related and interfertile species. These advances, taken together, will create new opportunities for the characterization of existing genetic variants, the creation of new sequence-tagged mutants, and the testing of proposed functional genetic relationships between gene products, and will greatly facilitate our understanding of the evolution and development of lepidopteran color patterns.
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Affiliation(s)
- Jeffrey M Marcus
- Department of Biology, Western Kentucky University, Bowling Green, KY 42101, USA.
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31
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Merchán HA, Jiggins CD, Linares M. A Narrow Heliconius cydno (Nymphalidae; Heliconiini) Hybrid Zone With Differences in Morph Sex Ratios1. Biotropica 2005. [DOI: 10.1111/j.1744-7429.2005.03140.x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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32
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Tobler A, Kapan D, Flanagan NS, Gonzalez C, Peterson E, Jiggins CD, Johntson JS, Heckel DG, McMillan WO. First-generation linkage map of the warningly colored butterfly Heliconius erato. Heredity (Edinb) 2004; 94:408-17. [PMID: 15592446 DOI: 10.1038/sj.hdy.6800619] [Citation(s) in RCA: 53] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
Abstract
We report the first genetic linkage map of Heliconius erato, a species that shows remarkable variation in its warningly colored wing patterns. We use crosses between H. erato and its sister species, H. himera, to place two major color pattern genes, D and Cr, on a linkage map containing AFLP, allozyme, microsatellite and single-copy nuclear loci. We identified all 21 linkage groups in an initial genetic screen of 22 progeny from an F1 female x male H. himera family. Of the 229 markers, 87 used to identify linkage groups were also informative in 35 progeny from a sibling backcross (H. himera female x F1 male). With these, and an additional 33 markers informative in the second family, we constructed recombinational maps for 19 of the 21 linkage groups. These maps varied in length from 18.1 to 431.1 centimorgans (cM) and yielded an estimated total length of 2400 cM. The average distance between markers was 23 cM, and eight of the 19 linkage groups, including the sex chromosome (Z) and the chromosome containing the Cr locus, contained two or more codominant anchor loci. Of the three potential candidate genes mapped here, Cubitus interruptus (Ci), Decapentaplegic (Dpp) and Wingless (Wg), only Ci was linked, although loosely, to a known Heliconius color pattern locus. This work is an important first step for constructing a denser genetic map of the H. erato color pattern radiation and for a comparative genomic study of the architecture of mimicry in Heliconius butterflies.
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Affiliation(s)
- A Tobler
- Department of Biology, University of Puerto Rico, PO Box 23360, San Juan 00931, Puerto Rico
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Altiero T, Rebecchi L. First evidence of achiasmatic male meiosis in the water bears Richtersius coronifer and Macrobiotus richtersi (Eutardigrada, Macrobiotidae). Hereditas 2004; 139:116-20. [PMID: 15061812 DOI: 10.1111/j.1601-5223.2003.01719.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
Chromosome behaviour during male meioses has been studied in two bisexual amphimictic populations of two tardigrade species, namely Richtersius coronifer and Macrobiotus richtersi (Eutardigrada, Macrobiotidae). Both bisexual populations exhibit a diploid chromosome number 2n=12 and no sex chromosomes were identified. DAPI staining and C-banding data indicate that all chromosomes of the bisexual population of R. coronifer are acrocentric. In both species, at male meiotic prophase, all six bivalent homologous chromosomes are aligned side by side along their length and show no evidence of chiasmata. However, in the oocytes of both species a chiasma is generally present in each bivalent at diplotene stage. Lack of recombination is previously unknown in tardigrades, but is a well known phenomenon in many other metazoans where it is always restricted to the heterogametic sex. In tardigrades there is no evidence of heterochromosomes, but it does not mean that in tardigrades, the heterogametic sex does not exist. The adaptive and evolutionary significance of achiasmatic meiosis is discussed.
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Affiliation(s)
- Tiziana Altiero
- Department of Animal Biology, University of Modena and Reggio Emilia, Modena, Italy.
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34
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Tombesi ML, Papeschi AG. Meiosis in Haematopinus Suis and Menacanthus Stramineus (Phthiraptera, Insecta). Hereditas 2004. [DOI: 10.1111/j.1601-5223.1993.00031.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
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35
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Heckel DG, Gahan LJ, Liu YB, Tabashnik BE. Genetic mapping of resistance to Bacillus thuringiensis toxins in diamondback moth using biphasic linkage analysis. Proc Natl Acad Sci U S A 1999; 96:8373-7. [PMID: 10411882 PMCID: PMC17523 DOI: 10.1073/pnas.96.15.8373] [Citation(s) in RCA: 103] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Transgenic plants producing environmentally benign Bacillus thuringiensis (Bt) toxins are deployed increasingly for insect control, but their efficacy will be short-lived if pests adapt quickly. The diamondback moth (Plutella xylostella), a worldwide pest of vegetables, is the first insect to evolve resistance to Bt toxins in open-field populations. A recessive autosomal gene confers resistance to at least four Bt toxins and enables survival without adverse effects on transgenic plants. Allelic variants of this gene confer resistance in strains from Hawaii, Pennsylvania, and the Philippines. Here we exploited the biphasic nature of Lepidopteran genetic linkage to map this gene in diamondback moth with 207 amplified fragment length polymorphisms as DNA markers. We also cloned and sequenced an amplified fragment length polymorphism marker for the chromosome containing the Bt resistance gene. The results provide a powerful tool for facilitating progress in understanding, monitoring, and managing resistance to Bt.
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Affiliation(s)
- D G Heckel
- Department of Biological Sciences, Clemson University, Clemson, SC 29634, USA.
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Linkage and cytogenetic studies in the swallowtail butterflies
Papilio polyxenes
Fab. and
Papilio machaon
L. and their hybrids. ACTA ACUST UNITED AC 1997. [DOI: 10.1098/rspb.1977.0104] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
By the hand-pairing technique, F
1
hybrids, back crosses and, for the first time, F
2
hybrids have been obtained between
Papilio polyxenes
Fab. (black North American swallowtail) and
Papilio machaon
L. (yellow old world swallowtail). Three types of investigation were carried out in parent species and hybrids: (1) linkage, (2) the presence of heteropyknotic bodies, and (3) pachytene chromosomes. (1) It was conclusively demonstrated that the loci controlling adult wing pattern and larval spot colour are not linked. (2) The two species differ with respect to the heteropyknotic body in somatic cells. In
P. polyxenes
, a body is present in cells from females but absent in those of males, whereas in
P. machaon
the body is present also in a high proportion of males. This difference was studied in the various hybrids. (3) The morphology of the W (= Y) chromosome was found to differ in the two species and this chromosome can, therefore, be traced in crosses. The data also suggest that in
P. machaon
the W consists of two parts which have been tentatively designated as W
1
and W
2
, both pairing with the Z ( = X) chromosome. An additional nucleolar bivalent is present in some
P. machaon
individuals and this may be responsible for the polymorphism of the heteropyknotic body in the males. The fact that there are about 700 species of Papilios, many of which can be hybridized, means that comparative studies on heterochromatin and chromosomes are possible, and the findings may be relevant to heteropyknotic bodies in other orders.
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37
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Sanderson AR. Cytological investigations of parthenogenesis in gall wasps (Cynipidae, Hymenoptera). Genetica 1988. [DOI: 10.1007/bf00122389] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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38
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39
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40
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Bigger TRL. A variation in the chromosome number of the English race of Anthocharis cardamines L. (Lepidoptera: v Pieridae). Heredity (Edinb) 1978. [DOI: 10.1038/hdy.1978.64] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
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41
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Traut W. A study of recombination, formation of chiasmata and synaptonemal complexes in female and male meiosis of Ephestia kuehniella (Lepidoptera). Genetica 1977. [DOI: 10.1007/bf00120178] [Citation(s) in RCA: 34] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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42
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Clarke CA, Sheppard PM, Mittwoch U. Heterochromatin polymorphism and colour pattern in the tiger swallowtail butterfly Papilio glaucus L. Nature 1976; 263:585-7. [PMID: 980105 DOI: 10.1038/263585a0] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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43
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Charlesworth D, Charlesworth B. Theoretical genetics of Batesian mimicry II. Evolution of supergenes. J Theor Biol 1975; 55:305-24. [PMID: 1207161 DOI: 10.1016/s0022-5193(75)80082-8] [Citation(s) in RCA: 89] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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44
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Turner JR, Sheppard PM. Absence of crossing-over in female butterflies (Heliconius). Heredity (Edinb) 1975; 34 Part 2:265-9. [PMID: 1055712 DOI: 10.1038/hdy.1975.29] [Citation(s) in RCA: 60] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Absence of recombination between linked markers in female Heliconius is suggested by coupling backcross broods in H. erato, by a repulsion F2 in H. melpomene, and by other crosses with this species. No recombinants have been found in the offspring of doubly heterozygous females in either species. This supports the contention that the absence of chiasmata at oogenesis in these bufferflies prevents genetic crossing-over. Chiasmata are absent in all the female Lepidoptera examined by Suomalainen and others, but Ephestia seems to show the absence of chiasmata but the presence of genetic recombination in the female, and therefore would repay further study.
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