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Horváth G, Balterer B, Micsonai A, Kardos J, Toke O. Multiple Timescale Dynamic Analysis of Functionally-Impairing Mutations in Human Ileal Bile Acid-Binding Protein. Int J Mol Sci 2022; 23:ijms231911346. [PMID: 36232642 PMCID: PMC9569817 DOI: 10.3390/ijms231911346] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 09/16/2022] [Accepted: 09/20/2022] [Indexed: 11/16/2022] Open
Abstract
Human ileal bile acid-binding protein (hI-BABP) has a key role in the enterohepatic circulation of bile salts. Its two internal binding sites exhibit positive cooperativity accompanied by a site-selectivity of glycocholate (GCA) and glycochenodeoxycholate (GCDA), the two most abundant bile salts in humans. To improve our understanding of the role of dynamics in ligand binding, we introduced functionally impairing single-residue mutations at two key regions of the protein and subjected the mutants to NMR relaxation analysis and MD simulations. According to our results, mutation in both the vicinity of the C/D (Q51A) and the G/H (Q99A) turns results in a redistribution of motional freedom in apo hI-BABP. Mutation Q51A, deteriorating the site-selectivity of GCA and GCDA, results in the channeling of ms fluctuations into faster motions in the binding pocket hampering the realization of key side chain interactions. Mutation Q99A, abolishing positive binding cooperativity for GCDA, leaves ms motions in the C-terminal half unchanged but by decoupling βD from a dynamic cluster of the N-terminal half displays an increased flexibility in the vicinity of site 1. MD simulations of the variants indicate structural differences in the portal region and mutation-induced changes in dynamics, which depend on the protonation state of histidines. A dynamic coupling between the EFGH portal, the C/D-region, and the helical cap is evidenced highlighting the interplay of structural and dynamic effects in bile salt recognition in hI-BABP.
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Affiliation(s)
- Gergő Horváth
- NMR Research Laboratory, Centre for Structural Science, Research Centre for Natural Sciences, 2 Magyar Tudósok Körútja, H-1117 Budapest, Hungary
| | - Bence Balterer
- NMR Research Laboratory, Centre for Structural Science, Research Centre for Natural Sciences, 2 Magyar Tudósok Körútja, H-1117 Budapest, Hungary
| | - András Micsonai
- ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117 Budapest, Hungary
| | - József Kardos
- ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE Eötvös Loránd University, Pázmány Péter sétány 1/C, H-1117 Budapest, Hungary
| | - Orsolya Toke
- NMR Research Laboratory, Centre for Structural Science, Research Centre for Natural Sciences, 2 Magyar Tudósok Körútja, H-1117 Budapest, Hungary
- Correspondence: ; Tel.: +36-1-382-6575
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2
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Toke O. Structural and Dynamic Determinants of Molecular Recognition in Bile Acid-Binding Proteins. Int J Mol Sci 2022; 23:ijms23010505. [PMID: 35008930 PMCID: PMC8745080 DOI: 10.3390/ijms23010505] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 12/30/2021] [Accepted: 12/31/2021] [Indexed: 12/12/2022] Open
Abstract
Disorders in bile acid transport and metabolism have been related to a number of metabolic disease states, atherosclerosis, type-II diabetes, and cancer. Bile acid-binding proteins (BABPs), a subfamily of intracellular lipid-binding proteins (iLBPs), have a key role in the cellular trafficking and metabolic targeting of bile salts. Within the family of iLBPs, BABPs exhibit unique binding properties including positive binding cooperativity and site-selectivity, which in different tissues and organisms appears to be tailored to the local bile salt pool. Structural and biophysical studies of the past two decades have shed light on the mechanism of bile salt binding at the atomic level, providing us with a mechanistic picture of ligand entry and release, and the communication between the binding sites. In this review, we discuss the emerging view of bile salt recognition in intestinal- and liver-BABPs, with examples from both mammalian and non-mammalian species. The structural and dynamic determinants of the BABP-bile–salt interaction reviewed herein set the basis for the design and development of drug candidates targeting the transcellular traffic of bile salts in enterocytes and hepatocytes.
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Affiliation(s)
- Orsolya Toke
- Laboratory for NMR Spectroscopy, Structural Research Centre, Research Centre for Natural Sciences, 2 Magyar Tudósok Körútja, H-1117 Budapest, Hungary
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3
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Pagano K, Paolino M, Fusi S, Zanirato V, Trapella C, Giuliani G, Cappelli A, Zanzoni S, Molinari H, Ragona L, Olivucci M. Bile Acid Binding Protein Functionalization Leads to a Fully Synthetic Rhodopsin Mimic. J Phys Chem Lett 2019; 10:2235-2243. [PMID: 30995409 DOI: 10.1021/acs.jpclett.9b00210] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Rhodopsins are photoreceptive proteins using light to drive a plethora of biological functions such as vision, proton and ion pumping, cation and anion channeling, and gene and enzyme regulation. Here we combine organic synthesis, NMR structural studies, and photochemical characterization to show that it is possible to prepare a fully synthetic mimic of rhodopsin photoreceptors. More specifically, we conjugate a bile acid binding protein with a synthetic mimic of the rhodopsin protonated Schiff base chromophore to achieve a covalent complex featuring an unnatural protein host, photoswitch, and photoswitch-protein linkage with a reverse orientation. We show that, in spite of its molecular-level diversity, light irradiation of the prepared mimic fuels a photochromic cycle driven by sequential photochemical and thermal Z/E isomerizations reminiscent of the photocycles of microbial rhodopsins.
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Affiliation(s)
- Katiuscia Pagano
- Istituto per lo Studio delle Macromolecole, CNR , Via A. Corti 12 , 20133 Milano , Italy
| | - Marco Paolino
- Dipartimento di Biotecnologie, Chimica e Farmacia (Dipartimento di Eccellenza 2018-2022) , Università degli Studi di Siena , Via Aldo Moro 2 , 53100 Siena , Italy
| | - Stefania Fusi
- Dipartimento di Biotecnologie, Chimica e Farmacia (Dipartimento di Eccellenza 2018-2022) , Università degli Studi di Siena , Via Aldo Moro 2 , 53100 Siena , Italy
| | | | | | - Germano Giuliani
- Dipartimento di Biotecnologie, Chimica e Farmacia (Dipartimento di Eccellenza 2018-2022) , Università degli Studi di Siena , Via Aldo Moro 2 , 53100 Siena , Italy
| | - Andrea Cappelli
- Dipartimento di Biotecnologie, Chimica e Farmacia (Dipartimento di Eccellenza 2018-2022) , Università degli Studi di Siena , Via Aldo Moro 2 , 53100 Siena , Italy
| | - Serena Zanzoni
- Centro Piattaforme Tecnologiche , Università di Verona , Strada Le Grazie , 37134 Verona , Italy
| | - Henriette Molinari
- Istituto per lo Studio delle Macromolecole, CNR , Via A. Corti 12 , 20133 Milano , Italy
| | - Laura Ragona
- Istituto per lo Studio delle Macromolecole, CNR , Via A. Corti 12 , 20133 Milano , Italy
| | - Massimo Olivucci
- Dipartimento di Biotecnologie, Chimica e Farmacia (Dipartimento di Eccellenza 2018-2022) , Università degli Studi di Siena , Via Aldo Moro 2 , 53100 Siena , Italy
- Chemistry Department , Bowling Green State University , Bowling Green , Ohio 43403 , United States
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D'Onofrio M, Zanzoni S, Munari F, Monaco HL, Assfalg M, Capaldi S. The long variant of human ileal bile acid-binding protein associated with colorectal cancer exhibits sub-cellular localization and lipid binding behaviour distinct from those of the common isoform. Biochim Biophys Acta Gen Subj 2017; 1861:2315-2324. [PMID: 28689989 DOI: 10.1016/j.bbagen.2017.07.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Revised: 06/09/2017] [Accepted: 07/05/2017] [Indexed: 12/29/2022]
Abstract
BACKGROUND Ileal bile acid-binding protein, IBABP, participates in the intracellular trafficking of bile salts and influences their signaling activities. The recently discovered variant, IBABP-L, bearing an N-terminal 49-amino acid extension, was found to be associated with colorectal cancer and to protect cancer cells from the cytotoxic effects of deoxycholate. However, the precise function and the molecular properties of this variant are currently unknown. METHODS Bioinformatics tools and confocal microscopy were used to investigate the sub-cellular localization of IBABP-L; protein dynamics, ligand binding and interaction with membrane models were studied by 2D NMR and fluorescence spectroscopy. RESULTS Based on sub-cellular localization experiments we conclude that IBABP-L is targeted to the secretory pathway by a 24-residue signal peptide and, upon its cleavage, the mature protein is constitutively released into the extracellular space. Site-resolved NMR experiments indicated the distinct preference of primary and secondary bile salts to form either heterotypic or homotypic complexes with IBABP-L. The presence of the relatively dynamic N-terminal extension, originating only subtle conformational perturbations in the globular domain, was found to influence binding site occupation in IBABP-L as compared to IBABP. Even more pronounced differences were found in the tendency of the two variants to associate with phospholipid bilayers. CONCLUSIONS IBABP-L exhibits different sub-cellular localization, ligand-binding properties and membrane interaction propensity compared to the canonical short isoform. GENERAL SIGNIFICANCE Our results constitute an essential first step towards an understanding of the role of IBABP-L in bile salt trafficking and signaling under healthy and pathological conditions.
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Affiliation(s)
- Mariapina D'Onofrio
- Biomolecular NMR Laboratory, Department of Biotechnology, University of Verona, Ca' Vignal 1, Strada Le Grazie 15, 37134 Verona, Italy
| | - Serena Zanzoni
- Biomolecular NMR Laboratory, Department of Biotechnology, University of Verona, Ca' Vignal 1, Strada Le Grazie 15, 37134 Verona, Italy
| | - Francesca Munari
- Biomolecular NMR Laboratory, Department of Biotechnology, University of Verona, Ca' Vignal 1, Strada Le Grazie 15, 37134 Verona, Italy
| | - Hugo L Monaco
- Biocrystallography Laboratory, Department of Biotechnology, University of Verona, Ca' Vignal 1, Strada Le Grazie 15, 37134 Verona, Italy
| | - Michael Assfalg
- Biomolecular NMR Laboratory, Department of Biotechnology, University of Verona, Ca' Vignal 1, Strada Le Grazie 15, 37134 Verona, Italy.
| | - Stefano Capaldi
- Biocrystallography Laboratory, Department of Biotechnology, University of Verona, Ca' Vignal 1, Strada Le Grazie 15, 37134 Verona, Italy.
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5
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Tomaselli S, Ramirez DOS, Carletto RA, Varesano A, Vineis C, Zanzoni S, Molinari H, Ragona L. Electrospun Lipid Binding Proteins Composite Nanofibers with Antibacterial Properties. Macromol Biosci 2016; 17. [DOI: 10.1002/mabi.201600300] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2016] [Revised: 09/13/2016] [Indexed: 01/24/2023]
Affiliation(s)
- Simona Tomaselli
- Istituto per lo Studio delle Macromolecole (ISMAC); CNR, via Corti 12 20133 Milano Italy
| | | | | | - Alessio Varesano
- Istituto per lo Studio delle Macromolecole (ISMAC); CNR, C.so G. Pella 16 13900 Biella Italy
| | - Claudia Vineis
- Istituto per lo Studio delle Macromolecole (ISMAC); CNR, C.so G. Pella 16 13900 Biella Italy
| | - Serena Zanzoni
- Dipartimento di Biotecnologie; Università degli Studi di Verona; Strada le Grazie 15 37134 Verona Italy
| | - Henriette Molinari
- Istituto per lo Studio delle Macromolecole (ISMAC); CNR, via Corti 12 20133 Milano Italy
| | - Laura Ragona
- Istituto per lo Studio delle Macromolecole (ISMAC); CNR, via Corti 12 20133 Milano Italy
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6
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Horváth G, Bencsura Á, Simon Á, Tochtrop GP, DeKoster GT, Covey DF, Cistola DP, Toke O. Structural determinants of ligand binding in the ternary complex of human ileal bile acid binding protein with glycocholate and glycochenodeoxycholate obtained from solution NMR. FEBS J 2016; 283:541-55. [PMID: 26613247 DOI: 10.1111/febs.13610] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2015] [Revised: 11/03/2015] [Accepted: 11/24/2015] [Indexed: 01/13/2023]
Abstract
UNLABELLED Besides aiding digestion, bile salts are important signal molecules exhibiting a regulatory role in metabolic processes. Human ileal bile acid binding protein (I-BABP) is an intracellular carrier of bile salts in the epithelial cells of the distal small intestine and has a key role in the enterohepatic circulation of bile salts. Positive binding cooperativity combined with site selectivity of glycocholate and glycochenodeoxycholate, the two most abundant bile salts in the human body, make human I-BABP a unique member of the family of intracellular lipid binding proteins. Solution NMR structure of the ternary complex of human I-BABP with glycocholate and glycochenodeoxycholate reveals an extensive network of hydrogen bonds and hydrophobic interactions stabilizing the bound bile salts. Conformational changes accompanying bile salt binding affects four major regions in the protein including the C/D, E/F and G/H loops as well as the helical segment. Most of these protein regions coincide with a previously described network of millisecond time scale fluctuations in the apo protein, a motion absent in the bound state. Comparison of the heterotypic doubly ligated complex with the unligated form provides further evidence of a conformation selection mechanism of ligand entry. Structural and dynamic aspects of human I-BABP-bile salt interaction are discussed and compared with characteristics of ligand binding in other members of the intracellular lipid binding protein family. PROTEIN DATA BANK ACCESSION NUMBERS The coordinates of the 10 lowest energy structures of the human I-BABP : GCDA : GCA complex as well as the distance restraints used to calculate the final ensemble have been deposited in the Brookhaven Protein Data Bank with accession number 2MM3.
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Affiliation(s)
- Gergő Horváth
- Institute of Organic Chemistry, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary
| | - Ákos Bencsura
- Institute of Organic Chemistry, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary
| | - Ágnes Simon
- Institute of Organic Chemistry, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary
| | - Gregory P Tochtrop
- Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St Louis, MO, USA.,Department of Molecular Biology and Pharmacology, Washington University School of Medicine, St Louis, MO, USA
| | - Gregory T DeKoster
- Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St Louis, MO, USA
| | - Douglas F Covey
- Department of Molecular Biology and Pharmacology, Washington University School of Medicine, St Louis, MO, USA
| | - David P Cistola
- Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St Louis, MO, USA
| | - Orsolya Toke
- Institute of Organic Chemistry, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary
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7
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Tomaselli S, Pagano K, Boulton S, Zanzoni S, Melacini G, Molinari H, Ragona L. Lipid binding protein response to a bile acid library: a combined NMR and statistical approach. FEBS J 2015; 282:4094-113. [PMID: 26260520 DOI: 10.1111/febs.13405] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2015] [Revised: 07/20/2015] [Accepted: 08/06/2015] [Indexed: 01/23/2023]
Abstract
Primary bile acids, differing in hydroxylation pattern, are synthesized from cholesterol in the liver and, once formed, can undergo extensive enzyme-catalysed glycine/taurine conjugation, giving rise to a complex mixture, the bile acid pool. Composition and concentration of the bile acid pool may be altered in diseases, posing a general question on the response of the carrier (bile acid binding protein) to the binding of ligands with different hydrophobic and steric profiles. A collection of NMR experiments (H/D exchange, HET-SOFAST, ePHOGSY NOESY/ROESY and (15) N relaxation measurements) was thus performed on apo and five different holo proteins, to monitor the binding pocket accessibility and dynamics. The ensemble of obtained data could be rationalized by a statistical approach, based on chemical shift covariance analysis, in terms of residue-specific correlations and collective protein response to ligand binding. The results indicate that the same residues are influenced by diverse chemical stresses: ligand binding always induces silencing of motions at the protein portal with a concomitant conformational rearrangement of a network of residues, located at the protein anti-portal region. This network of amino acids, which do not belong to the binding site, forms a contiguous surface, sensing the presence of the bound lipids, with a signalling role in switching protein-membrane interactions on and off.
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Affiliation(s)
- Simona Tomaselli
- NMR Laboratory, Istituto per lo Studio delle Macromolecole (ISMAC), Milano, Italy
| | - Katiuscia Pagano
- NMR Laboratory, Istituto per lo Studio delle Macromolecole (ISMAC), Milano, Italy
| | - Stephen Boulton
- Departments of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Canada
| | | | - Giuseppe Melacini
- Departments of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Canada.,Department of Chemistry and Chemical Biology, McMaster University, Hamilton, Canada
| | - Henriette Molinari
- NMR Laboratory, Istituto per lo Studio delle Macromolecole (ISMAC), Milano, Italy
| | - Laura Ragona
- NMR Laboratory, Istituto per lo Studio delle Macromolecole (ISMAC), Milano, Italy
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8
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Favretto F, Ceccon A, Zanzoni S, D'Onofrio M, Ragona L, Molinari H, Assfalg M. The unique ligand binding features of subfamily-II iLBPs with respect to bile salts and related drugs. Prostaglandins Leukot Essent Fatty Acids 2015; 95:1-10. [PMID: 25468388 DOI: 10.1016/j.plefa.2014.10.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/12/2014] [Accepted: 10/20/2014] [Indexed: 11/28/2022]
Abstract
Intracellular lipid binding proteins (iLBPs) are a family of evolutionarily related small cytoplasmic proteins implicated in the transcellular transport of lipophilic ligands. Subfamily-II iLBPs include the liver fatty acid binding protein (L-FABP), and the ileal and the liver and ileal bile acid binding proteins (L-BABP and I-BABP). Atomic-level investigations during the past 15-20 years have delivered relevant information on bile acid binding by this protein group, revealing unique features including binding cooperativity, promiscuity, and site selectivity. Using NMR spectroscopy and other biophysical techniques, our laboratories have contributed to an understanding of the molecular determinants of some of these properties and their generality among proteins from different animal species. We focused especially on formation of heterotypic complexes, considering the mixed compositions of physiological bile acid pools. Experiments performed with synthetic bile acid derivatives showed that iLBPs could act as targets for cell-specific contrast agents and, more generally, as effective carriers of amphiphilic drugs. This review collects the major findings related to bile salt interactions with iLBPs aiming to provide keys for a deeper understanding of protein-mediated intracellular bile salt trafficking.
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Affiliation(s)
- Filippo Favretto
- Department of Biotechnology, University of Verona, Strada Le Grazie 15, Verona 37134, Italy
| | - Alberto Ceccon
- Department of Biotechnology, University of Verona, Strada Le Grazie 15, Verona 37134, Italy
| | - Serena Zanzoni
- Department of Biotechnology, University of Verona, Strada Le Grazie 15, Verona 37134, Italy
| | - Mariapina D'Onofrio
- Department of Biotechnology, University of Verona, Strada Le Grazie 15, Verona 37134, Italy
| | - Laura Ragona
- Institute for Macromolecular Studies, National Research Council, Via Bassini 15, Milan 20133, Italy
| | - Henriette Molinari
- Institute for Macromolecular Studies, National Research Council, Via Bassini 15, Milan 20133, Italy
| | - Michael Assfalg
- Department of Biotechnology, University of Verona, Strada Le Grazie 15, Verona 37134, Italy.
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9
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Horváth G, Egyed O, Toke O. Temperature Dependence of Backbone Dynamics in Human Ileal Bile Acid-Binding Protein: Implications for the Mechanism of Ligand Binding. Biochemistry 2014; 53:5186-98. [DOI: 10.1021/bi500553f] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Gergő Horváth
- Institute of Organic Chemistry,
Research Centre for Natural Sciences, Hungarian Academy of Sciences, 2 Magyar tudósok körútja, H-1117 Budapest, Hungary
| | - Orsolya Egyed
- Institute of Organic Chemistry,
Research Centre for Natural Sciences, Hungarian Academy of Sciences, 2 Magyar tudósok körútja, H-1117 Budapest, Hungary
| | - Orsolya Toke
- Institute of Organic Chemistry,
Research Centre for Natural Sciences, Hungarian Academy of Sciences, 2 Magyar tudósok körútja, H-1117 Budapest, Hungary
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10
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Pagano K, Tomaselli S, Zanzoni S, Assfalg M, Molinari H, Ragona L. Bile acid binding protein: a versatile host of small hydrophobic ligands for applications in the fields of MRI contrast agents and bio-nanomaterials. Comput Struct Biotechnol J 2013; 6:e201303021. [PMID: 24688729 PMCID: PMC3962148 DOI: 10.5936/csbj.201303021] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2013] [Revised: 11/19/2013] [Accepted: 11/22/2013] [Indexed: 01/02/2023] Open
Abstract
During the last decade a growing amount of evidence has been obtained, supporting the role of the beta-clamshell family of intracellular lipid binding proteins (iLBPs) not only in the translocation of lipophilic molecules but also in lipid mediated signalling and metabolism. Given the central role of lipids in physiological processes, it is essential to have detailed knowledge on their interactions with cognate binding proteins. Structural and dynamical aspects of the binding mechanisms have been widely investigated by means of NMR spectroscopy, docking and molecular dynamics simulation approaches. iLBPs share a stable beta-barrel fold, delimiting an internal cavity capable of promiscuous ligand binding and display significant flexibility at the putative ligand portal. These features make this class of proteins good scaffolds to build host-guest systems for applications in nanomedicine and nanomaterials.
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Affiliation(s)
- Katiuscia Pagano
- Istituto per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Simona Tomaselli
- Istituto per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Serena Zanzoni
- Dipartimento di Biotecnologie, Università degli Studi di Verona, Strada Le Grazie 15, 37134, Verona, Italy
| | - Michael Assfalg
- Dipartimento di Biotecnologie, Università degli Studi di Verona, Strada Le Grazie 15, 37134, Verona, Italy
| | - Henriette Molinari
- Istituto per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Laura Ragona
- Istituto per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
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11
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Tomaselli S, Giovanella U, Pagano K, Leone G, Zanzoni S, Assfalg M, Meinardi F, Molinari H, Botta C, Ragona L. Encapsulation of a Rhodamine Dye within a Bile Acid Binding Protein: Toward Water Processable Functional Bio Host–Guest Materials. Biomacromolecules 2013; 14:3549-56. [DOI: 10.1021/bm400904s] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Simona Tomaselli
- Istituto
per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Umberto Giovanella
- Istituto
per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Katiuscia Pagano
- Istituto
per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Giuseppe Leone
- Istituto
per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Serena Zanzoni
- Dipartimento
di Biotecnologie, Università degli Studi di Verona, Strada
Le Grazie 15, 37134, Verona, Italy
| | - Michael Assfalg
- Dipartimento
di Biotecnologie, Università degli Studi di Verona, Strada
Le Grazie 15, 37134, Verona, Italy
| | - Francesco Meinardi
- Università degli Studi Milano Bicocca, Via Cozzi 53, 20125, Milano, Italy
| | - Henriette Molinari
- Istituto
per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Chiara Botta
- Istituto
per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
| | - Laura Ragona
- Istituto
per lo Studio delle Macromolecole, CNR, via Bassini 15, 20133 Milano, Italy
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12
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Favretto F, Assfalg M, Gallo M, Cicero DO, D'Onofrio M, Molinari H. Ligand Binding Promiscuity of Human Liver Fatty Acid Binding Protein: Structural and Dynamic Insights from an Interaction Study with Glycocholate and Oleate. Chembiochem 2013; 14:1807-19. [DOI: 10.1002/cbic.201300156] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2013] [Indexed: 11/09/2022]
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13
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Horváth G, Király P, Tárkányi G, Toke O. Internal Motions and Exchange Processes in Human Ileal Bile Acid Binding Protein As Studied by Backbone 15N Nuclear Magnetic Resonance Spectroscopy. Biochemistry 2012; 51:1848-61. [DOI: 10.1021/bi201588q] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Gergő Horváth
- Institute of Structural Chemistry, Chemical Research Center of the Hungarian Academy of Sciences, 59-67 Pusztaszeri út, Budapest, H-1025 Hungary
| | - Péter Király
- Institute of Structural Chemistry, Chemical Research Center of the Hungarian Academy of Sciences, 59-67 Pusztaszeri út, Budapest, H-1025 Hungary
| | - Gábor Tárkányi
- Institute of Structural Chemistry, Chemical Research Center of the Hungarian Academy of Sciences, 59-67 Pusztaszeri út, Budapest, H-1025 Hungary
| | - Orsolya Toke
- Institute of Structural Chemistry, Chemical Research Center of the Hungarian Academy of Sciences, 59-67 Pusztaszeri út, Budapest, H-1025 Hungary
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14
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Tomaselli S, Assfalg M, Pagano K, Cogliati C, Zanzoni S, Molinari H, Ragona L. A Disulfide Bridge Allows for Site-Selective Binding in Liver Bile Acid Binding Protein Thereby Stabilising the Orientation of Key Amino Acid Side Chains. Chemistry 2012; 18:2857-66. [DOI: 10.1002/chem.201102203] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2011] [Revised: 12/05/2011] [Indexed: 11/08/2022]
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Cogliati C, Ragona L, D'Onofrio M, Günther U, Whittaker S, Ludwig C, Tomaselli S, Assfalg M, Molinari H. Site-Specific Investigation of the Steady-State Kinetics and Dynamics of the Multistep Binding of Bile Acid Molecules to a Lipid Carrier Protein. Chemistry 2010; 16:11300-10. [DOI: 10.1002/chem.201000498] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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