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Xin F, Wang R, Chang Y, Xie Z, Zhao Y, Zhang H, Song Y. Solid-state fermentation produces greater stearidonic acid levels in genetically engineered Mucor circinelloides. Lett Appl Microbiol 2022; 75:1617-1627. [PMID: 36067029 DOI: 10.1111/lam.13829] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Revised: 08/22/2022] [Accepted: 08/29/2022] [Indexed: 11/29/2022]
Abstract
Omega-3 (ω-3) polyunsaturated fatty acids (PUFAs) are important dietary components due to their health benefits and preventative role in cardiovascular disease. Fish-based and plant seed oils are rich in stearidonic acid (SDA; 18:4 n-3) which are readily metabolized into ω-3 PUFAs such as eicosapentaenoic acid. However, these natural sources of SDA are generally low yielding and are unlikely to meet global demands, so new sustainable microbial fermentative sources of SDA need to be identified. Expression of delta15-desaturase in the oleaginous filamentous fungus Mucor circinelloides (McD15D) has been used to construct a recombinant SDA-producing McD15D strain that produces 5.0% SDA levels using submerged fermentation conditions. Switching to solid-state fermentation conditions in the same medium with submerged fermentation resulted in this engineered strain producing significantly higher amounts of SDA. A Box-Behnken design (BBD) of response surface methodology (RSM) approach has been used to identify optimal glucose and ammonium tartrate concentrations and temperature levels to maximize SDA production. The use of these optimal solid-state fermentation conditions resulted in the spores and mycelium of the recombinant McD15D producing 19.5% (0.64 mg g-1 ) and 12.2% (1.52 mg g-1 ) SDA content respectively, which represents an overall increase in SDA yield of 188.0% when compared to SDA yields produced using submerged fermentation conditions.
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Affiliation(s)
- Feifei Xin
- Colin Ratledge Center for Microbial Lipids, School of Agriculture Engineering and Food Science, Shandong University of Technology, 266 Xincun West Road, Zibo, Shandong, 255000, China
| | - Ruixue Wang
- Colin Ratledge Center for Microbial Lipids, School of Agriculture Engineering and Food Science, Shandong University of Technology, 266 Xincun West Road, Zibo, Shandong, 255000, China
| | - Yufei Chang
- Colin Ratledge Center for Microbial Lipids, School of Agriculture Engineering and Food Science, Shandong University of Technology, 266 Xincun West Road, Zibo, Shandong, 255000, China
| | - Zhike Xie
- Colin Ratledge Center for Microbial Lipids, School of Agriculture Engineering and Food Science, Shandong University of Technology, 266 Xincun West Road, Zibo, Shandong, 255000, China
| | - Yanlei Zhao
- Colin Ratledge Center for Microbial Lipids, School of Agriculture Engineering and Food Science, Shandong University of Technology, 266 Xincun West Road, Zibo, Shandong, 255000, China
| | - Huaiyuan Zhang
- Colin Ratledge Center for Microbial Lipids, School of Agriculture Engineering and Food Science, Shandong University of Technology, 266 Xincun West Road, Zibo, Shandong, 255000, China
| | - Yuanda Song
- Colin Ratledge Center for Microbial Lipids, School of Agriculture Engineering and Food Science, Shandong University of Technology, 266 Xincun West Road, Zibo, Shandong, 255000, China
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Srinivasan R, Subramanian P, Tirumani S, Gothandam KM, Ramya M. Ectopic expression of bacterial 1-aminocyclopropane 1-carboxylate deaminase in Chlamydomonas reinhardtii enhances algal biomass and lipid content under nitrogen deficit condition. BIORESOURCE TECHNOLOGY 2021; 341:125830. [PMID: 34455253 DOI: 10.1016/j.biortech.2021.125830] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2021] [Revised: 08/18/2021] [Accepted: 08/19/2021] [Indexed: 06/13/2023]
Abstract
1-Aminocyclopropane-1-carboxylate (ACC) deaminase is a well-known bacterial producing enzyme that helps plants to overcome stress conditions by modulating ethylene biosynthesis. However, the functional role of ACC deaminase and ethylene in microalgae during stress remains to be explored. In this study, to investigate the role of ACC deaminase (acds) from Pseudomonas putida UW4 in enhancing the biomass and lipid content of Chlamydomonas under nitrogen deficit condition. The synthetic codon-optimized acds gene was cloned into vector pChlamy_4 and introduced into Chlamydomonas. Results indicated that Chlamydomonas-expressing acds lines showed significant tolerance to nitrogen-deficit by reducing the ethylene content. The biomass, chlorophyll content and photosynthetic activity of acds-expressing lines were significantly increased during nitrogen deficit condition. Moreover, the intracellular lipid and fatty acid content were much higher in acds-expressing lines than the wild-type. In terms of stress alleviation, the transgenic lines displayed increased antioxidant enzymes, reduced ROS and lipid peroxidation levels.
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Affiliation(s)
- Ramachandran Srinivasan
- Molecular Genetics Laboratory, Department of Genetic Engineering, College of Engineering and Technology, SRM Institute of Science and Technology, SRM Nagar, Kattankulathur 603203, Chengalpattu District, Tamil Nadu, India
| | - Parthiban Subramanian
- Department of Biotechnology and Microbiology, National College, Karumandapam, Thiruchirapalli 620001, Tamil Nadu, India
| | - Srikanth Tirumani
- Indian Institute of Science Education and Research, Karkambadi Road, Mangalam (P.O), Tirupati 517507, Andhra Pradesh, India
| | - Kodiveri Muthukaliannan Gothandam
- Department of Biotechnology, School of Bio-Sciences and Technology, Vellore Institute of Technology, Vellore 632014, Tamil Nadu, India
| | - Mohandass Ramya
- Molecular Genetics Laboratory, Department of Genetic Engineering, College of Engineering and Technology, SRM Institute of Science and Technology, SRM Nagar, Kattankulathur 603203, Chengalpattu District, Tamil Nadu, India.
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Novinscak A, Filion M. Long Term Comparison of Talc- and Peat-Based Phytobeneficial Pseudomonas fluorescens and Pseudomonas synxantha Bioformulations for Promoting Plant Growth. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2020. [DOI: 10.3389/fsufs.2020.602911] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Use of plant growth promoting rhizobacteria (PGPR) is an important strategy in sustainable agriculture. Among PGPR, many Pseudomonas strains are of great interest due to their abilities to colonize and thrive in the rhizosphere, in addition to displaying mechanisms in plant growth promotion and biocontrol activities. However, as Pseudomonas strains are non-spore forming micro-organisms, their development into stable bioformulations for commercial applications can be difficult. This study examined over a long term period the effect of two different carriers, peat and talc, to prepare bioformulations using phytobeneficial Pseudomonas strains belonging to two taxonomical groups of interest: P. fluorescens and P. synxantha. Each strain has previously demonstrated plant growth promotion activity when inoculated in the rhizosphere. Each bioformulation was stored at ambient temperature and their viability was measured up to 180 days. In parallel, every 30 days (up to 180 days) each bioformulation was also applied in the rhizosphere of plantlets to validate their plant growth promotion activity, and their establishment in the rhizosphere was quantified by using strain-specific quantitative polymerase chain reaction assays. The viability of both Pseudomonas strains in the bioformulations was found to decrease after the first 15 days and remained relatively stable for up to 180 days. When applying the bioformulations to Buglossoides arvensis plantlets, the expected plant growth promotion was observed when using up to 180 day-old formulations of P. fluorescens and up to 120 day-old formulations of P. synxantha, with similar results for both carriers. Establishment of both Pseudomonas strains in the rhizosphere inoculated with the peat-based carrier bioformulations stored for up to 180 days was found to be stable. While a lower establishment of P. fluorecens in the rhizosphere was observed when talc-based bioformulations were stored for 90 days or more, rhizosphere colonization by P. synxantha talc-based bioformulations remained stable for up to 180 days. In conclusion, both peat and talc appear to be suitable carriers for Pseudomonas bioformulations, however strain-specific variability exists and therefore the viability of each Pseudomonas strain and its capacity to maintain its plant growth promotion activity should be validated in different substrates before determining which formulation to use.
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Jiménez JA, Novinscak A, Filion M. Pseudomonas fluorescens LBUM677 differentially increases plant biomass, total oil content and lipid composition in three oilseed crops. J Appl Microbiol 2019; 128:1119-1127. [PMID: 31793115 DOI: 10.1111/jam.14536] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2019] [Revised: 11/26/2019] [Accepted: 11/26/2019] [Indexed: 11/28/2022]
Abstract
AIMS Pseudomonas spp. have been widely studied for their plant growth-promoting effects. However, their capacity to promote lipid accumulation in oilseed crops is not well characterized. In this study, we evaluated the effect of Pseudomonas fluorescens LBUM677 on lipid accumulation in three oilseed crops: soybean (Glycine max), canola (Brassica napus) and corn gromwell (Buglossoides arvensis), a plant of high nutraceutical interest for its accumulation of the omega-3 stearidonic acid. METHODS AND RESULTS Pot experiments were conducted under controlled conditions where seeds were inoculated or not with LBUM677 and plants were harvested at 4, 8 and 12 weeks. A qPCR assay specifically targeting LBUM677 was used in parallel to correlate LBUM677 soil rhizosphere competency to growth promotion and seed lipid accumulation. Total oil seed content and fatty acid composition were analysed at seed maturity. Results showed that LBUM677 was able to establish itself in the rhizosphere of the three plant species at similar levels, but it differentially increased plant biomass, total oil content and lipid composition in a plant-specific manner. CONCLUSIONS Despite some species-specific differences observed in P. fluorescens LBUM677's effect on different crops, the strain appears to be a generalist plant growth-promoting rhizobacteria of oilseed crops. SIGNIFICANCE AND IMPACT OF THE STUDY LBUM677 shows great potential to be used as an inoculum to promote oil yield and fatty acid accumulation in oilseed crops.
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Affiliation(s)
- J A Jiménez
- Biology Department, Université de Moncton, Moncton, NB, Canada
| | - A Novinscak
- Biology Department, Université de Moncton, Moncton, NB, Canada
| | - M Filion
- Biology Department, Université de Moncton, Moncton, NB, Canada
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Ferchichi N, Toukabri W, Vrhovsek U, Angeli A, Masuero D, Mhamdi R, Trabelsi D. Inoculation of Lupinus albus with the nodule-endophyte Paenibacillus glycanilyticus LJ121 improves grain nutritional quality. Arch Microbiol 2019; 202:283-291. [PMID: 31650197 DOI: 10.1007/s00203-019-01745-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2019] [Revised: 09/27/2019] [Accepted: 10/10/2019] [Indexed: 12/01/2022]
Abstract
Metabolic changes occurring in white lupine grain were investigated in response to Plant Growth Promoting Rhizobacteria (PGPR) root inoculation under field condition. We precisely targeted lipids and phenolics changes occurring in white lupine grain in response to Pseudomonas brenneri LJ215 and/or Paenibacillus glycanilyticus LJ121 inoculation. Lipids and phenolic composition were analyzed using an Ultra High-Performance Liquid Chromatography/Tandem Mass Spectrometry Methods. As compared to grain of un-inoculated control plant, Paenibacillus glycaniliticus inoculation highly increased the total lipids content (from 232.55 in seeds of un-inoculated control plant to 944.95 mg/kg) and the relative percentage of several fatty acid such as oleic acid (+20.95%) and linoleic acid (+14.28%) and decreased the relative percentage of glycerophospholipids (- 13.11%), sterol (- 0.2% and - 0.34% for stigmasterol and campesterol, respectively) and prenol (- 17.45%) class. Paenibacillus glycaniliticus inoculation did not affect total phenolic content, while it modulated content of individual phenolic compounds and induced the accumulation of "new" phenolics compounds such as kaempferol. Paenibacillus glycanilyticus LJ121 can be a useful bio-fertilizer to enhance nutritional quality of white lupine grain.
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Affiliation(s)
- Nouha Ferchichi
- Faculté Des Sciences de Tunis, Université de Tunis El Manar, 2092, El Manar Tunis, Tunisia.,Food Quality and Nutrition Department, Fondazione Edmund Mach, IASMA Research and Innovation Centre, via E. Mach 1, 38010, San Michele all'Adige, Italy.,Centre of Biotechnology of Borj-Cedria (CBBC), Laboratory of Legumes, BP 901, 2050, Hammam Lif, Tunisia
| | - Wael Toukabri
- Faculté Des Sciences de Tunis, Université de Tunis El Manar, 2092, El Manar Tunis, Tunisia.,Centre of Biotechnology of Borj-Cedria (CBBC), Laboratory of Legumes, BP 901, 2050, Hammam Lif, Tunisia
| | - Urska Vrhovsek
- Food Quality and Nutrition Department, Fondazione Edmund Mach, IASMA Research and Innovation Centre, via E. Mach 1, 38010, San Michele all'Adige, Italy
| | - Andrea Angeli
- Food Quality and Nutrition Department, Fondazione Edmund Mach, IASMA Research and Innovation Centre, via E. Mach 1, 38010, San Michele all'Adige, Italy
| | - Domenico Masuero
- Food Quality and Nutrition Department, Fondazione Edmund Mach, IASMA Research and Innovation Centre, via E. Mach 1, 38010, San Michele all'Adige, Italy
| | - Ridha Mhamdi
- Centre of Biotechnology of Borj-Cedria (CBBC), Laboratory of Legumes, BP 901, 2050, Hammam Lif, Tunisia
| | - Darine Trabelsi
- Centre of Biotechnology of Borj-Cedria (CBBC), Laboratory of Legumes, BP 901, 2050, Hammam Lif, Tunisia.
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Complete Genome Sequence of the Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens LBUM677. Microbiol Resour Announc 2019; 8:8/25/e00438-19. [PMID: 31221648 PMCID: PMC6588369 DOI: 10.1128/mra.00438-19] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022] Open
Abstract
Pseudomonas fluorescens LBUM677 has shown the ability to increase plant biomass and seed oil yield in soybean, canola, and Buglossoides arvensis (corn gromwell) when inoculated in the rhizosphere. Here, we report a draft genome sequence of P. fluorescens LBUM677, with an estimated size of 6.14 Mb. Pseudomonas fluorescens LBUM677 has shown the ability to increase plant biomass and seed oil yield in soybean, canola, and Buglossoides arvensis (corn gromwell) when inoculated in the rhizosphere. Here, we report a draft genome sequence of P. fluorescens LBUM677, with an estimated size of 6.14 Mb.
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Novinscak A, Filion M. Persistence ofPseudomonas fluorescensLBUM677 in the rhizosphere of corn gromwell (Buglossoides arvensis) under field conditions and its impact on seed oil and stearidonic acid bioaccumulation. J Appl Microbiol 2019; 127:208-218. [DOI: 10.1111/jam.14283] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2019] [Revised: 04/02/2019] [Accepted: 04/12/2019] [Indexed: 12/13/2022]
Affiliation(s)
- A. Novinscak
- Department of Biology Université de Moncton Moncton NB Canada
| | - M. Filion
- Department of Biology Université de Moncton Moncton NB Canada
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