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Dawar FU, Shi Y, Zhou Y, Jin X, Zhao Z. Bacterial infection-biased abundance of proteins in the skin mucus of obscure puffer (Takifugu Obscurus). COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. PART D, GENOMICS & PROTEOMICS 2024; 52:101306. [PMID: 39116716 DOI: 10.1016/j.cbd.2024.101306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Revised: 07/31/2024] [Accepted: 08/02/2024] [Indexed: 08/10/2024]
Abstract
The skin mucus of fish is equipped with immunological and antimicrobial peptides that confer protection against invading pathogens. The skin mucus has been studied in fish however information regarding its immunological roles in bacterial infection is rare. This study highlighted the proteins and peptides in the skin mucus of Obscure puffer Takifugu obscurus that quantitatively altered against Aeromonas hydrophila infection. We infected the fish through bath immersion, intraperitonially, and treated with PBS (control) then compared the level of proteins in the skin mucus among the groups using liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis. The Tandem Mass Tag (TMT) based quantification showed that 4896 proteins were Deferentially Quantified Proteins (DQPs), based on 19,751 unique peptides. Of which 170 were depleted (decreased in abundance) and 69 were abundant in comparison of Bath Treated (BT) vs Control (C) groups. Similarly, 76 DQPs were depleted and 70 were abundant in comparison of Treated (T) vs BT groups. Further, 126 DQPs were depleted, and 34 were abundant in comparison to T vs C groups. The DQPs we report were mostly immunological and were involved in unique biological functions and pathways. The interesting protein we report, where some of the proteins are for the first time in fish, shows the protein-rich structure of the mucus of fish, which may act as a biomarker to be targeted for bacterial disease therapy in fish and ultimately hint to the way of making resistance in fish against bacterial pathogens.
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Affiliation(s)
- Farman Ullah Dawar
- Jiangsu Province Engineering Research Center for Marine Bio-resources Sustainable Utilization, College of Oceanography, Hohai University, 1 Xikang Road, Nanjing, Jiangsu 210098, China; Laboratory of Fisheries and Aquaculture, Department of Zoology, Kohat University of Science and Technology Kohat, 26000, Khyber Pakhtunkhwa, Pakistan
| | - Yan Shi
- Jiangsu Province Engineering Research Center for Marine Bio-resources Sustainable Utilization, College of Oceanography, Hohai University, 1 Xikang Road, Nanjing, Jiangsu 210098, China
| | - Yu Zhou
- Jiangsu Province Engineering Research Center for Marine Bio-resources Sustainable Utilization, College of Oceanography, Hohai University, 1 Xikang Road, Nanjing, Jiangsu 210098, China
| | - Xingkun Jin
- Jiangsu Province Engineering Research Center for Marine Bio-resources Sustainable Utilization, College of Oceanography, Hohai University, 1 Xikang Road, Nanjing, Jiangsu 210098, China
| | - Zhe Zhao
- Jiangsu Province Engineering Research Center for Marine Bio-resources Sustainable Utilization, College of Oceanography, Hohai University, 1 Xikang Road, Nanjing, Jiangsu 210098, China.
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Huang J, Jordan HR, Older CE, Griffin MJ, Allen PJ, Wise DJ, Goodman PM, Reifers JG, Yamamoto FY. Lactococcus lactis MA5 is a potential autochthonous probiotic for nutrient digestibility enhancement and bacterial pathogen inhibition in hybrid catfish (Ictalurus punctatus × I. furcatus). JOURNAL OF FISH DISEASES 2024:e13997. [PMID: 38973153 DOI: 10.1111/jfd.13997] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2024] [Revised: 06/19/2024] [Accepted: 06/24/2024] [Indexed: 07/09/2024]
Abstract
With the emergence of diseases, the U.S. catfish industry is under challenge. Current trends prefer autochthonous bacteria as potential probiotic candidates owing to their adaptability and capacity to effectively colonize the host's intestine, which can enhance production performance and bolster disease resistance. The objective of this study was to isolate an autochthonous bacterium as probiotic for hybrid catfish. Initially, an analysis of the intestinal microbiota of hybrid catfish reared in earthen ponds was conducted for subsequent probiotic development. Twenty lactic acid bacteria were isolated from the digesta of overperforming catfish, and most of the candidates demonstrated probiotic traits, including proteolytic and lipolytic abilities; antagonistic inhibition of catfish enteric bacterial pathogens, negative haemolytic activity and antibiotic susceptibility. Subsequent to this screening process, an isolate of Lactococcus lactis (MA5) was deemed the most promising probiotic candidate. In silico analyses were conducted, and several potential probiotic functions were predicted, including essential amino acids and vitamin synthesis. Moreover, genes for three bacteriocins, lactococcin A, enterolysin A and sactipeptide BmbF, were identified. Lastly, various protectant media for lyophilization of MA5 were assessed. These findings suggest that Lactococcus lactis MA5 can be an autochthonous probiotic from hybrid catfish, holding promise to be further tested in feeding trials.
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Affiliation(s)
- Jing Huang
- Thad Cochran National Warmwater Aquaculture Center, Delta Research and Extension Center, Mississippi State University, Stoneville, Mississippi, USA
- Department of Wildlife, Fisheries, and Aquaculture, College of Forest Resources, Mississippi State University, Mississippi State, Mississippi, USA
| | - Heather R Jordan
- Department of Biology, Mississippi State University, Mississippi State, Mississippi, USA
| | - Caitlin E Older
- Warmwater Aquaculture Research Unit, Agricultural Research Service, U.S. Department of Agriculture, Stoneville, Mississippi, USA
| | - Matt J Griffin
- Thad Cochran National Warmwater Aquaculture Center, Delta Research and Extension Center, Mississippi State University, Stoneville, Mississippi, USA
- Department of Pathobiology and Population Medicine, College of Veterinary Medicine, Mississippi State University, Stoneville, Mississippi, USA
| | - Peter J Allen
- Department of Wildlife, Fisheries, and Aquaculture, College of Forest Resources, Mississippi State University, Mississippi State, Mississippi, USA
| | - David J Wise
- Thad Cochran National Warmwater Aquaculture Center, Delta Research and Extension Center, Mississippi State University, Stoneville, Mississippi, USA
- Department of Wildlife, Fisheries, and Aquaculture, College of Forest Resources, Mississippi State University, Mississippi State, Mississippi, USA
| | - Penelope M Goodman
- Thad Cochran National Warmwater Aquaculture Center, Delta Research and Extension Center, Mississippi State University, Stoneville, Mississippi, USA
| | - J Grant Reifers
- Thad Cochran National Warmwater Aquaculture Center, Delta Research and Extension Center, Mississippi State University, Stoneville, Mississippi, USA
| | - Fernando Y Yamamoto
- Thad Cochran National Warmwater Aquaculture Center, Delta Research and Extension Center, Mississippi State University, Stoneville, Mississippi, USA
- Department of Wildlife, Fisheries, and Aquaculture, College of Forest Resources, Mississippi State University, Mississippi State, Mississippi, USA
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Janda JM, Duman M. Expanding the Spectrum of Diseases and Disease Associations Caused by Edwardsiella tarda and Related Species. Microorganisms 2024; 12:1031. [PMID: 38792860 PMCID: PMC11124366 DOI: 10.3390/microorganisms12051031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 05/12/2024] [Accepted: 05/16/2024] [Indexed: 05/26/2024] Open
Abstract
The genus Edwardsiella, previously residing in the family Enterobacteriaceae and now a member of the family Hafniaceae, is currently composed of five species, although the taxonomy of this genus is still unsettled. The genus can primarily be divided into two pathogenic groups: E. tarda strains are responsible for almost all human infections, and two other species (E. ictaluri, E. piscicida) cause diseases in fish. Human infections predominate in subtropical habitats of the world and in specific geospatial regions with gastrointestinal disease, bloodborne infections, and wound infections, the most common clinical presentations in decreasing order. Gastroenteritis can present in many different forms and mimic other intestinal disturbances. Chronic gastroenteritis is not uncommon. Septicemia is primarily found in persons with comorbid conditions including malignancies and liver disease. Mortality rates range from 9% to 28%. Most human infections are linked to one of several risk factors associated with freshwater or marine environments such as seafood consumption. In contrast, edwardsiellosis in fish is caused by two other species, in particular E. ictaluri. Both E. ictaluri and E. piscicida can cause massive outbreaks of disease in aquaculture systems worldwide, including enteric septicemia in channel catfish and tilapia. Collectively, these species are increasingly being recognized as important pathogens in clinical and veterinary medicine. This article highlights and provides a current perspective on the taxonomy, microbiology, epidemiology, and pathogenicity of this increasingly important group.
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Affiliation(s)
- J. Michael Janda
- Kern County Public Health Laboratory, Bakersfield, CA 93306, USA
| | - Muhammed Duman
- Aquatic Animal Disease Department, Faculty of Veterinary Medicine, Bursa Uludag University, 16059 Bursa, Turkey;
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Vishnupriya V, Swaminathan TR, Dharmarathnam A, Sharma SRK, Preena PG. Virulent and Multi-drug-Resistant Edwardsiella tarda Infection in Oscar Fish: Unveiling the Threat of Mass Mortality and AMR Dissemination. Curr Microbiol 2024; 81:174. [PMID: 38753164 DOI: 10.1007/s00284-024-03698-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Accepted: 04/08/2024] [Indexed: 06/29/2024]
Abstract
The Oscar fish (Astronotus ocellatus) is among the most commonly domesticated and exported ornamental fish species from Kerala. The ornamental fish industry faces a significant challenge with the emergence of diseases caused by multi-drug-resistant bacteria. In the present study, six isolates were resolved from the diseased Oscar fish showing haemorrhages, necrosis, and loss of pigmentation. After phenotypic and genotypic characterization, the bacteria were identified as Edwardsiella tarda, Klebsiella pneumoniae, Enterococcus faecalis, Escherichia coli, Brevibacillus borstelensis, and Staphylococcus hominis. Experimental challenge studies in healthy Oscar fish showed that E. tarda caused 100% mortality within 240 h with 6.99 × 106 CFU/fish as LD50 and histopathology revealed the typical signs of infection. The pathogen was re-recovered from the moribund fish thereby confirming Koch's postulates. E. tarda was confirmed through the positive amplification of tarda-specific gene and virulence genes viz., etfD and escB were also detected using PCR. Antibiotic susceptibility tests using disc diffusion displayed that the pathogen is multi-drug-resistant towards antibiotics belonging to aminoglycosides, tetracyclines, and quinolones categories with a MAR index of 0.32, which implicated the antibiotic pressure in the farm. Plasmid curing studies showed a paradigm shift in the resistance pattern with MAR index of 0.04, highlighting the resistance genes are plasmid-borne except for the chromosome-borne tetracycline resistance gene (tetA). This study is the first of its kind in detecting mass mortality caused by E. tarda in Oscar fish. Vigilant surveillance and strategic actions are crucial for the precise detection of pathogens and AMR in aquaculture.
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Affiliation(s)
- Vijayan Vishnupriya
- Department of Marine Biosciences, Faculty of Ocean Science and Technology, Kerala University of Fisheries and Ocean Studies, Panangad, Kochi, Kerala, 682506, India
| | - T Raja Swaminathan
- Peninsular Aquatic Genetic Resources, Centre of ICAR-National Bureau of Fish Genetic Resources, CMFRI Campus, P.O. Number 1603, Kochi, Kerala, 682018, India
- Microbiology, Fermentation and Biotechnology Division, ICAR-Central Institute of Fisheries Technology, CIFT Junction, Willingdon Island, Matsyapuri P.O., Kochi, Kerala, 682029, India
| | - Arathi Dharmarathnam
- Peninsular Aquatic Genetic Resources, Centre of ICAR-National Bureau of Fish Genetic Resources, CMFRI Campus, P.O. Number 1603, Kochi, Kerala, 682018, India
| | - S R Krupesha Sharma
- Marine Biotechnology, Fish Nutrition and Health Division, ICAR-Central Marine Fisheries Research Institute, Ernakulam North PO, Kochi, Kerala, 682018, India
| | - P G Preena
- Department of Marine Biosciences, Faculty of Ocean Science and Technology, Kerala University of Fisheries and Ocean Studies, Panangad, Kochi, Kerala, 682506, India.
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5
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Fernández A, Suárez-Santana C, Alonso-Almorox P, Consoli FA, Suárez González Z, Molpeceres-Diego I, Iglesias González C, Hernández ML, Pérez AH, Martín-Barrasa JL, Llorente LI, Medina FM, Guzmán RG, Rueda DL, Arbelo M, Sierra E. Case Report: Ambergris coprolite and septicemia in a male sperm whale stranded in La Palma (Canary Islands). Front Vet Sci 2024; 11:1388276. [PMID: 38650849 PMCID: PMC11034612 DOI: 10.3389/fvets.2024.1388276] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Accepted: 03/22/2024] [Indexed: 04/25/2024] Open
Abstract
On the 21st of May 2023, a dead adult male sperm whale (Physeter macrocephalus) of 13 m in length and estimated weight of around 18,000 kg was reportedly stranded at Playa Los Nogales, La Palma, Canary Islands, Spain. A necropsy was performed 48hpm. A 50 cm diameter and 9.5 kg coprolite was found obstructing the caudal colon-rectal lumen. Necro-hemorrhagic lesions were found in heart muscles and three different bacteria of intestinal origin were isolated and identified (Edwarsiella tarda, Hathewaya limosa and Clostridium perfringens). It is reported a lethal septicemia of intestinal origin associated with ambergris coprolite as cause of death in this sperm whale.
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Affiliation(s)
- Antonio Fernández
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Cristian Suárez-Santana
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Paula Alonso-Almorox
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Francesco Achille Consoli
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Zuleima Suárez González
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Ignacio Molpeceres-Diego
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Claudia Iglesias González
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | | | - Amaranta Hugo Pérez
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - José Luis Martín-Barrasa
- Group of Fish Health and Infectious Diseases, University Institute of Animal Health, and Food Safety (IUSA), University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Country Animal Facility, Research Unit, Hospital Universitario de Gran Canaria Dr. Negrín, Las Palmas de Gran Canaria, Spain
| | - Laura Iglesias Llorente
- Microbiology Department, Hospital Universitario de Gran Canaria Dr. Negrín, Las Palmas de Gran Canaria, Spain
| | - Félix M. Medina
- Biodiversity Unit, Cabildo de la Isla de La Palma, Canary Islands, Spain
| | - Raiden Grandía Guzmán
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Diego Llinás Rueda
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Manuel Arbelo
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
| | - Eva Sierra
- Veterinary Histology and Pathology, Institute of Animal Health and Food Safety (IUSA), Atlantic Center for Cetacean Research, Marine Mammals Health WOAH col Centre, University of Las Palmas de Gran Canaria, Veterinary School, Las Palmas, Spain
- Canary Islands Stranding Network, Canary Islands Government, Canary Islands, Spain
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Xu X, Yin P, Zhang Y, Yang H. The immune response of fairy shrimp Branchinella kugenumaensis against Edwardsiella anguillarum infections by de novo transcriptome analysis. FISH & SHELLFISH IMMUNOLOGY 2024; 144:109260. [PMID: 38043874 DOI: 10.1016/j.fsi.2023.109260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 11/24/2023] [Accepted: 11/24/2023] [Indexed: 12/05/2023]
Abstract
To explore the immune defense mechanisms of the ancient crustacean fairy shrimp (B.kugenumaensis) and uncover antibacterial-related gene resources, the present study analyzed the pathological changes in B. kugenumaensis infected with E. anguillarum. Differential gene expression changes between the infected and uninfected groups were investigated through comparative transcriptome sequencing to elucidate the molecular responses to the infection. Under transmission electron microscopy, the intestinal mucosal structure of B. kugenumaensis was damaged, the microvilli disappeared, the number of mitochondria and endoplasmic reticulum increased, mitochondria vacuolated and arranged disordered. The transcriptome data indicated that a total of 250,520,580 clean reads were assembled into 66,502 unigenes, with an average length of 789 bp and an N50 length of 1326 bp. Following bacterial infection, approximately 2678 differentially expressed genes (DEGs) were identified, with 1732 genes upregulated and 946 genes downregulated. The detected DEGs related to immune responses, particularly involving apoptosis, lysosome, autophagy, phagosome, and MAPK signaling pathways. Moreover, 9 immunity-related genes with different expressions were confirmed by using real-time quantitative PCR (RT-qPCR). This study first reports the pathogenicity of E. anguillarum on B. kugenumaensis and speculates that immune effectors such as lysozyme and lectin, as well as apoptosis, lysosome, and the MAPK signaling pathway, play crucial roles in the innate immunity of fairy shrimp. These findings deepen our understanding of fairy shrimp immune regulatory mechanisms and provide a theoretical foundation for disease prevention and control.
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Affiliation(s)
- Xinrui Xu
- College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China
| | - Peng Yin
- College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China
| | - Yingying Zhang
- College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China
| | - Hui Yang
- College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China.
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Ali S, Ullah W, Kamarulzaman AFS, Hassan M, Rauf M, Khattak MNK, Dawar FU. Proteomic profile of epidermal mucus from Labeo rohita reveals differentially abundant proteins after Aeromonas hydrophila infection. FISH AND SHELLFISH IMMUNOLOGY REPORTS 2023; 5:100115. [PMID: 37771818 PMCID: PMC10523009 DOI: 10.1016/j.fsirep.2023.100115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Revised: 09/13/2023] [Accepted: 09/13/2023] [Indexed: 09/30/2023] Open
Abstract
We report the proteomic profile of Epidermal Mucus (EM) from Labeo rohita and identified the differentially abundant proteins (DAPs) against Aeromonas hydrophila infection through label-free liquid chromatography-mass spectrometry (LC-MS/MS). Using discovery-based proteomics, a total of 2039 proteins were quantified in nontreated group and 1,328 proteins in the treated group, of which 114 were identified as DAPs in both the groups. Of the 114 DAPs, 68 proteins were upregulated and 46 proteins were downregulated in the treated group compared to nontreated group. Functional annotations of these DAPs shows their association with metabolism, cellular process, molecular process, cytoskeletal, stress, and particularly immune system. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis and Fisher's exact test between the two groups shows that most of the proteins were immune-related, which were significantly associated with the proteasome, phagosome, and Salmonella infection pathways. Overall, this study shows a basic and primary way for further functional research of the involvement of vitellogenin 2, alpha-2-macroglobulin-like protein, toll-like receptors (TLR-13), calpain, keratin-like proteins, and heat shock proteins against bacterial infection. Nonetheless, this first-ever comprehensive report of a proteomic sketch of EM from L. rohita after A. hydrophila infection provides systematic protein information to broadly understand the biological role of fish EM against bacterial infection.
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Affiliation(s)
- Shandana Ali
- Laboratory of Fisheries and Aquaculture, Department of Zoology, Kohat University of Science and Technology Kohat, 26000 Khyber Pakhtunkhwa, Pakistan
| | - Waheed Ullah
- Department of Microbiology, Kohat University of Science and Technology Kohat, 26000 Khyber Pakhtunkhwa, Pakistan
| | | | - Maizom Hassan
- Institute of System Biology (INBIOSIS), Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia
| | - Muhammad Rauf
- Laboratory of Fisheries and Aquaculture, Department of Zoology, Kohat University of Science and Technology Kohat, 26000 Khyber Pakhtunkhwa, Pakistan
| | - Muhammad Nasir Khan Khattak
- Department of Applied Biology, College of Sciences, University of Sharjah, Sharjah 27272, United Arab Emirates
| | - Farman Ullah Dawar
- Laboratory of Fisheries and Aquaculture, Department of Zoology, Kohat University of Science and Technology Kohat, 26000 Khyber Pakhtunkhwa, Pakistan
- Laboratory of Marine Biotechnology, College of Oceanography, Hohai University, 1 Xikang Road, Nanjing, Jiangsu 210098, China
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8
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Xiang J, Li MY, Li H. Aspartate metabolic flux promotes nitric oxide to eliminate both antibiotic-sensitive and -resistant Edwardsiella tarda in zebrafish. Front Immunol 2023; 14:1277281. [PMID: 37885884 PMCID: PMC10598754 DOI: 10.3389/fimmu.2023.1277281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Accepted: 09/15/2023] [Indexed: 10/28/2023] Open
Abstract
Introduction Metabolic reprogramming potentiates host protection against antibiotic-sensitive or -resistant bacteria. However, it remains unclear whether a single reprogramming metabolite is effective enough to combat both antibiotic-sensitive and -resistant bacteria. This knowledge is key for implementing an antibiotic-free approach. Methods The reprogramming metabolome approach was adopted to characterize the metabolic state of zebrafish infected with tetracycline-sensitive and -resistant Edwardsiella tarda and to identify overlapping depressed metabolite in dying zebrafish as a reprogramming metabolite. Results Aspartate was identify overlapping depressed metabolite in dying zebrafish as a reprogramming metabolite. Exogenous aspartate protects zebrafish against infection caused by tetracycline-sensitive and -resistant E. tarda. Mechanistically, exogenous aspartate promotes nitric oxide (NO) biosynthesis. NO is a well-documented factor of promoting innate immunity against bacteria, but whether it can play a role in eliminating both tetracycline-sensitive and -resistant E. tarda is unknown. Thus, in this study, aspartate was replaced with sodium nitroprusside to provide NO, which led to similar aspartate-induced protection against tetracycline-sensitive and -resistant E. tarda. Discussion These findings support the conclusion that aspartate plays an important protective role through NO against both types of E. tarda. Importantly, we found that tetracycline-sensitive and -resistant E. tarda are sensitive to NO. Therefore, aspartate is an effective reprogramming metabolite that allows implementation of an antibiotic-free approach against bacterial pathogens.
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Affiliation(s)
- Jiao Xiang
- State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Min-yi Li
- State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Hui Li
- State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
- Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China
- Guangdong Province Key Laboratory for Pharmaceutical Functional Genes, Sun Yat-sen University, Guangzhou, China
- Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China
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9
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Huo Y, Hu X, Lü J, Luo F, Liang J, Lei H, Lv A. Single-cell transcriptome, phagocytic activity and immunohistochemical analysis of crucian carp (Carassius auratus) in response to Rahnella aquatilis infection. FISH & SHELLFISH IMMUNOLOGY 2023; 140:108970. [PMID: 37488042 DOI: 10.1016/j.fsi.2023.108970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 07/14/2023] [Accepted: 07/20/2023] [Indexed: 07/26/2023]
Abstract
In teleost fish, kidney is an important immune and hematopoietic organ with multiple physiological functions. However, the immune cells and cellular markers of kidney require further elucidation in crucian carp (C. auratus). Here we report on the single-cell transcriptional landscape in posterior kidney, immunohistochemical and phagocytic features of C. auratus with R. aquatilis infection. The results showed that a total of 18 cell populations were identified for the main immune cells such as monocytes/macrophages (Mo/Mφ), dendritic cells (DCs), B cells, T cells, granulocytes and hematopoietic progenitor cells (HPCs). Pseudo-time trajectory analysis was reconstructed for the immune cells using Monocle2 to obtain additional insights into their developmental lineage relationships. In the detected tissues (liver, spleen, kidney, intestine, skin, and gills) of infected fish exhibited positive immunohistochemical staining with prepared for antibody to R. aquatilis. Apoptotic cells were fluorescently demonstrated by TUNEL assay, and bacterial phagocytic activity were observed for neutrophils and Mo/Mφ cells, respectively. Moreover, a similar up-ward/down-ward expression trend of the selected immune and inflammatory genes was found in the kidney against R. aquatilis infection, which were significantly involved in TLR/NLR, ECM adhesion, phago-lysosome, apoptosis, complement and coagulation pathways. To our knowledge, this is the first report on the detailed characterization of immune cells and host-R. aquatilis interaction, which will contribute to understanding on the biology of renal immune cells and repertoire of potential markers in cyprinid fish species.
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Affiliation(s)
- Yian Huo
- College of Fisheries, Tianjin Agricultural University, Tianjin, 300392, China
| | - Xiucai Hu
- Tianjin Key Lab of Aqua-Ecology and Aquaculture, Tianjin Agricultural University, Tianjin, 300392, China
| | - Jiarui Lü
- School of Foreign Languages, Peking University, Beijing, 100871, China
| | - Fuli Luo
- College of Fisheries, Tianjin Agricultural University, Tianjin, 300392, China
| | - Jing Liang
- College of Fisheries, Tianjin Agricultural University, Tianjin, 300392, China
| | - Haibo Lei
- College of Basic Science, Tianjin Agricultural University, Tianjin, 300392, China
| | - Aijun Lv
- College of Fisheries, Tianjin Agricultural University, Tianjin, 300392, China; Tianjin Key Lab of Aqua-Ecology and Aquaculture, Tianjin Agricultural University, Tianjin, 300392, China.
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Xue Z, Tian W, Han Y, Feng Z, Wang Y, Zhang W. The hidden diversity of microbes in ballast water and sediments revealed by metagenomic sequencing. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 882:163666. [PMID: 37094681 DOI: 10.1016/j.scitotenv.2023.163666] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Revised: 04/17/2023] [Accepted: 04/18/2023] [Indexed: 05/03/2023]
Abstract
With the rapid globalization of trade, the worldwide spread of pathogens through ballast water is becoming a major concern. Although the international maritime organization (IMO) convention has been adopted to prevent the spread of harmful pathogens, the limited species resolution of the current microbe-monitoring methods challenged the ballast water and sediments management (BWSM). In this study, we explored metagenomic sequencing to investigate the species composition of microbial communities in four international vessels for BWSM. Our results showed the largest species diversity (14,403) in ballast water and sediments, including bacteria (11,710), eukaryotes (1007), archaea (829), and viruses (790). A total of 129 phyla were detected, among which the Proteobacteria, followed by Bacteroidetes, and Actinobacteria were the most abundant. Notably, 422 pathogens that are potentially harmful to marine environments and aquaculture were identified. The co-occurrence network analysis showed that most of these pathogens were positively correlated with the commonly used indicator bacteria Vibrio cholerae, Escherichia coli, and intestinal Enterococci species, validating the D-2 standard in BWSM. The functional profile showed prominent pathways of methane and sulfur metabolism, indicating that the microbial community in the severe tank environment still utilizes the energy to sustain such a high level of microbe diversity. In conclusion, metagenomic sequencing provides novel information for BWSM.
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Affiliation(s)
- Zhaozhao Xue
- Marine College, Shandong University, Weihai, China
| | - Wen Tian
- Animal, Plant and Food Inspection Center of Nanjing Customs District, Nanjing, China
| | - Yangchun Han
- Integarted Technical Service Center of Jiangyin Customs, Jiangyin, China
| | - Zhen Feng
- Animal, Plant and Food Inspection Center of Nanjing Customs District, Nanjing, China
| | - Yu Wang
- Animal, Plant and Food Inspection Center of Nanjing Customs District, Nanjing, China
| | - Wei Zhang
- Marine College, Shandong University, Weihai, China.
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