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Dufresnes C, Ghielmi S, Halpern B, Martínez-Freiría F, Mebert K, Jelić D, Crnobrnja-Isailović J, Gippner S, Jablonski D, Joger U, Laddaga L, Petrovan S, Tomović L, Vörös J, İğci N, Kariş M, Zinenko O, Ursenbacher S. Phylogenomic insights into the diversity and evolution of Palearctic vipers. Mol Phylogenet Evol 2024; 197:108095. [PMID: 38729384 DOI: 10.1016/j.ympev.2024.108095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Revised: 04/27/2024] [Accepted: 05/06/2024] [Indexed: 05/12/2024]
Abstract
Despite decades of molecular research, phylogenetic relationships in Palearctic vipers (genus Vipera) still essentially rely on a few loci, such as mitochondrial barcoding genes. Here we examined the diversity and evolution of Vipera with ddRAD-seq data from 33 representative species and subspecies. Phylogenomic analyses of ∼ 1.1 Mb recovered nine major clades corresponding to known species/species complexes which are generally consistent with the mitochondrial phylogeny, albeit with a few deep discrepancies that highlight past hybridization events. The most spectacular case is the Italian-endemic V. walser, which is grouped with the alpine genetic diversity of V. berus in the nuclear tree despite carrying a divergent mitogenome related to the Caucasian V. kaznakovi complex. Clustering analyses of SNPs suggest potential admixture between diverged Iberian taxa (V. aspis zinnikeri and V. seoanei), and confirm that the Anatolian V. pontica corresponds to occasional hybrids between V. (ammodytes) meridionalis and V. kaznakovi. Finally, all analyzed lineages of the V. berus complex (including V. walser and V. barani) form vast areas of admixture and may be delimited as subspecies. Our study sets grounds for future taxonomic and phylogeographic surveys on Palearctic vipers, a group of prime interest for toxinological, ecological, biogeographic and conservation research.
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Affiliation(s)
- Christophe Dufresnes
- Laboratory for Amphibian Systematics and Evolutionary Research, College of Biology & the Environment, Nanjing Forestry University, Nanjing, China; Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE-PSL, Université des Antilles, Paris, France.
| | | | - Bálint Halpern
- MME Birdlife Hungary, Budapest, Hungary; Department of Systematic Zoology and Ecology, Institute of Biology, ELTE-Eötvös Loránd University, Budapest, Hungary; HUN-REN - ELTE - MTM Integrative Ecology Research Group, Budapest, Hungary
| | - Fernando Martínez-Freiría
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, 4485-661 Vairão, Portugal
| | - Konrad Mebert
- Global Biology, 5242 Birr, Switzerland; Institute of Development, Ecology, Conservation and Cooperation, 00144 Rome, Italy
| | - Dusan Jelić
- Croatian Institute for Biodiversity, BIOTA Ltd, 10000 Zagreb, Croatia
| | - Jelka Crnobrnja-Isailović
- Department of Biology and Ecology, Faculty of Sciences and Mathematics, University of Niš, 18000 Niš, Serbia; Department of Evolutionary Biology, Institute for Biological Research « S. Stanković », University of Belgrade - National Institute for Republic of Serbia, 11108 Belgrade, Serbia
| | - Sven Gippner
- Zoological Institute, Technical University of Braunschweig, Mendelssohnstr. 4, 38106 Braunschweig, Germany
| | - Daniel Jablonski
- Department of Zoology, Comenius University in Bratislava, Bratislava, Slovakia
| | - Ulrich Joger
- State Museum of Natural History, Braunschweig, Germany
| | - Lorenzo Laddaga
- Società di Scienze Naturali del Verbano Cusio Ossola, Museo di Scienze Naturali, Collegio Mellerio Rosmini, Domodossola, Italy
| | - Silviu Petrovan
- Conservation Science Group, Department of Zoology, University of Cambridge, UK
| | - Ljiljana Tomović
- Institute of Zoology, Faculty of Biology, University of Belgrade, Studentski trg 16, 11000 Belgrade, Serbia
| | - Judit Vörös
- Department of Zoology, Hungarian Natural History Museum, 1088 Budapest, Hungary
| | - Naşit İğci
- Department of Molecular Biology and Genetics, Faculty of Science and Arts, Nevşehir Haci Bektaş Veli University, 50300 Nevşehir, Türkiye
| | - Mert Kariş
- Laboratory Technology Program, Acıgöl Vocational School of Technical Sciences, Nevşehir Haci Bektaş Veli University, 50300 Nevşehir, Türkiye
| | | | - Sylvain Ursenbacher
- info fauna - Karch, University of Neuchâtel, Avenue de Bellevaux 51, 2000 Neuchâtel, Switzerland; Balaton Limnological Research Institute, Klebelsberg Kuno u. 3, 8237 Tihany, Hungary.
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Di Nicola MR, Crevani M, Avella I, Cerullo A, Dorne JLCM, Paolino G, Zattera C. A Guide to the Clinical Management of Vipera Snakebite in Italy. Toxins (Basel) 2024; 16:255. [PMID: 38922149 PMCID: PMC11209566 DOI: 10.3390/toxins16060255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Revised: 05/22/2024] [Accepted: 05/29/2024] [Indexed: 06/27/2024] Open
Abstract
The genus Vipera encompasses most species of medically significant venomous snakes of Europe, with Italy harbouring four of them. Envenomation by European vipers can result in severe consequences, but underreporting and the absence of standardised clinical protocols hinder effective snakebite management. This study provides an updated, detailed set of guidelines for the management and treatment of Vipera snakebite tailored for Italian clinicians. It includes taxonomic keys for snake identification, insights into viper venom composition, and recommendations for clinical management. Emphasis is placed on quick and reliable identification of medically relevant snake species, along with appropriate first aid measures. Criteria for antivenom administration are outlined, as well as indications on managing potential side effects. While the protocol is specific to Italy, its methodology can potentially be adapted for other European countries, depending on local resources. The promotion of comprehensive data collection and collaboration among Poison Control Centres is advocated to optimise envenomation management protocols and improve the reporting of epidemiological data concerning snakebite at the country level.
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Affiliation(s)
- Matteo Riccardo Di Nicola
- Unit of Dermatology and Cosmetology, Istituto di Ricovero e Cura a Carattere Scientifico San Raffaele Hospital, Via Olgettina 60, 20132 Milan, Italy
- Department of Pathobiology, Pharmacology and Zoological Medicine, Faculty of Veterinary Medicine, Wildlife Health Ghent, Ghent University, 9820 Merelbeke, Belgium
- Asociación Herpetológica Española, Apartado de correos 191, 28911 Leganés, Spain
| | - Marta Crevani
- Poison Control Centre, Azienda Socio-Sanitaria Territoriale Grande Ospedale Metropolitano Niguarda, 20162 Milan, Italy
| | - Ignazio Avella
- Landes-Offensive zur Entwicklung Wissenschaftlich-ökonomischer Exzellenz-Centre for Translational Biodiversity Genomics, Senckenberganlage 25, 60325 Frankfurt Am Main, Germany
- Institute for Insect Biotechnology, Justus-Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| | - Anna Cerullo
- Department of Veterinary Sciences, University of Turin, L.go Braccini 2, 10095 Grugliasco, Italy
| | - Jean-Lou C. M. Dorne
- Methodological and Scientific Support Unit, European Food Safety Authority, Via Carlo Magno 1A, 43100 Parma, Italy
| | - Giovanni Paolino
- Unit of Dermatology and Cosmetology, Istituto di Ricovero e Cura a Carattere Scientifico San Raffaele Hospital, Via Olgettina 60, 20132 Milan, Italy
| | - Caterina Zattera
- Unit of Emergency Medicine, Istituto di Ricovero e Cura a Carattere Scientifico Policlinico San Matteo University Hospital, University of Pavia, P.Le Golgi, 19, 27100 Pavia, Italy
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Sassoè-Pognetto M, Cavalcante R, Paonessa M. Acute compartment syndrome and fasciotomy after a viper bite in Italy: a case report. Ital J Pediatr 2024; 50:70. [PMID: 38627836 PMCID: PMC11020867 DOI: 10.1186/s13052-024-01638-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Accepted: 03/28/2024] [Indexed: 04/19/2024] Open
Abstract
BACKGROUND Bites caused by European vipers are rare medical emergencies but can occasionally cause life-threatening complications. Viper venom causes local symptoms, which can be accompanied by systemic manifestations in severe cases. The local effects of snakebites include edema and, more rarely, necrosis and compartment syndrome. The consequences of envenomation are often more pronounced in children due to their smaller body size. CASE PRESENTATION We present the case of a 6-year-old girl who experienced multiple viper bites in the lower limb in northwest Italy. The girl received supportive care but progressed to develop compartment syndrome that required emergency fasciotomy. The patient's condition improved promptly after surgical decompression and administration of antivenom, but full recovery required prolonged hospitalization and rehabilitation. CONCLUSIONS This case highlights the importance of obtaining a timely assessment of the severity of viper envenomation without delaying the administration of antivenom in most serious cases. The presence of multiple bite marks on the patient is one factor that may help to predict the clinical severity of snakebites and anticipate symptom progression.
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Affiliation(s)
- Marco Sassoè-Pognetto
- Department of Neuroscience "Rita Levi Montalcini", University of Torino, C.so Massimo d'Azeglio, 52, 10126, Torino, Italy.
| | - Riccardo Cavalcante
- Centro Emys Piemonte, ELEADE Società Cooperativa a.r.l, Chiaverano, TO, Italy
| | - Matteo Paonessa
- Pediatric Orthopedic Surgery Department, "Regina Margherita" Children's Hospital, Torino, Italy
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Nania D, Lumbierres M, Ficetola GF, Falaschi M, Pacifici M, Rondinini C. Maps of area of habitat for Italian amphibians and reptiles. NATURE CONSERVATION 2022. [DOI: 10.3897/natureconservation.49.82931] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Planning conservation actions requires detailed information on species’ geographic distribution. Species distribution data are most needed in areas hosting unique or endangered biodiversity. Italy is one of the European countries with the highest levels of herpetological diversity and endemism and is home to several threatened species of amphibians and reptiles. Information on the distribution of species’ habitats can help identify sites where the species is most likely to thrive, as viable populations depend on it. Area of Habitat (AOH) maps reveal the distribution of the habitat available to the species within their geographic range. We produced high resolution, freely accessible global area of habitat maps for 60 species of reptiles and amphibians distributed in Italy, which represent 60% of all Italian amphibian and reptile species. We validated a total of 44 AOH maps through a presence-only based evaluation method, with 86% of these maps showing a performance better than expected by chance. AOH maps can be used as a reference for conservation planning, as well as to investigate macroecological patterns of Italian herpetofauna. Furthermore, AOH maps can help monitoring habitat loss, which is known to be a major threat to many reptile and amphibian species in Europe.
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