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Khodr A, Kay E, Gomez-Valero L, Ginevra C, Doublet P, Buchrieser C, Jarraud S. Molecular epidemiology, phylogeny and evolution of Legionella. INFECTION GENETICS AND EVOLUTION 2016; 43:108-22. [PMID: 27180896 DOI: 10.1016/j.meegid.2016.04.033] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2016] [Revised: 04/29/2016] [Accepted: 04/30/2016] [Indexed: 12/12/2022]
Abstract
Legionella are opportunistic pathogens that develop in aquatic environments where they multiply in protozoa. When infected aerosols reach the human respiratory tract they may accidentally infect the alveolar macrophages leading to a severe pneumonia called Legionnaires' disease (LD). The ability of Legionella to survive within host-cells is strictly dependent on the Dot/Icm Type 4 Secretion System that translocates a large repertoire of effectors into the host cell cytosol. Although Legionella is a large genus comprising nearly 60 species that are worldwide distributed, only about half of them have been involved in LD cases. Strikingly, the species Legionella pneumophila alone is responsible for 90% of all LD cases. The present review summarizes the molecular approaches that are used for L. pneumophila genotyping with a major focus on the contribution of whole genome sequencing (WGS) to the investigation of local L. pneumophila outbreaks and global epidemiology studies. We report the newest knowledge regarding the phylogeny and the evolution of Legionella and then focus on virulence evolution of those Legionella species that are known to have the capacity to infect humans. Finally, we discuss the evolutionary forces and adaptation mechanisms acting on the Dot/Icm system itself as well as the role of mobile genetic elements (MGE) encoding T4ASSs and of gene duplications in the evolution of Legionella and its adaptation to different hosts and lifestyles.
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Affiliation(s)
- A Khodr
- Institut Pasteur, Unité de Biologie des Bactéries Intracellulaires, France; CNRS, UMR 3525, 28, Rue du Dr Roux, 75724 Paris, France
| | - E Kay
- CIRI, International Center for Infectiology Research, Inserm, U1111, CNRS, UMR 5308, Université Lyon 1, École Normale Supérieure de Lyon, Lyon F-69008, France
| | - L Gomez-Valero
- Institut Pasteur, Unité de Biologie des Bactéries Intracellulaires, France; CNRS, UMR 3525, 28, Rue du Dr Roux, 75724 Paris, France
| | - C Ginevra
- CIRI, International Center for Infectiology Research, Inserm, U1111, CNRS, UMR 5308, Université Lyon 1, École Normale Supérieure de Lyon, Lyon F-69008, France; French National Reference Center of Legionella, Institut des agents infectieux, Hospices Civils de Lyon, Lyon, France
| | - P Doublet
- CIRI, International Center for Infectiology Research, Inserm, U1111, CNRS, UMR 5308, Université Lyon 1, École Normale Supérieure de Lyon, Lyon F-69008, France
| | - C Buchrieser
- Institut Pasteur, Unité de Biologie des Bactéries Intracellulaires, France; CNRS, UMR 3525, 28, Rue du Dr Roux, 75724 Paris, France
| | - S Jarraud
- CIRI, International Center for Infectiology Research, Inserm, U1111, CNRS, UMR 5308, Université Lyon 1, École Normale Supérieure de Lyon, Lyon F-69008, France; French National Reference Center of Legionella, Institut des agents infectieux, Hospices Civils de Lyon, Lyon, France
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Jakubek D, Guillaume C, Binet M, Leblon G, DuBow M, Le Brun M. Susceptibility of Legionella strains to the chlorinated biocide, monochloramine. Microbes Environ 2013; 28:336-45. [PMID: 24005820 PMCID: PMC4070956 DOI: 10.1264/jsme2.me12205] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
Members of the Legionella genus find suitable conditions for their growth and survival in nuclear power plant cooling circuits. To limit the proliferation of Legionella pathogenic bacteria in nuclear power plant cooling circuits, and ensure that levels remain below regulatory thresholds, monochloramine treatment can be used. Although the treatment is highly effective, i.e. it reduces Legionella numbers by over 99%, Legionella bacteria can still be detected at low concentrations and rapid re-colonisation of circuits can occur after the treatment has ceased. The aim of this study was to develop an in vitro methodology for determining the intrinsic susceptibility of L. pneumophila strains, collected from various nuclear power plant cooling circuits subjected to different treatment conditions. The methodology was developed by using an original approach based on response surface methodology (RSM) combined with a multifactorial experimental design. The susceptibility was evaluated by the Ct factor. The susceptibility of environmental strains varies widely and is, for some strains, greater than that of known tolerant species; however, strain susceptibility was not related to treatment conditions. Selection pressure induced by monochloramine use did not result in the selection of more tolerant Legionella strains and did not explain the detection of Legionella during treatment or the rapid re-colonisation of cooling circuits after disinfection has ceased.
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Jakubek D, Le Brun M, Leblon G, DuBow M, Binet M. The impact of monochloramine on the diversity and dynamics ofLegionella pneumophilasubpopulations in a nuclear power plant cooling circuit. FEMS Microbiol Ecol 2013; 85:302-12. [DOI: 10.1111/1574-6941.12121] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2012] [Revised: 03/19/2013] [Accepted: 03/20/2013] [Indexed: 11/28/2022] Open
Affiliation(s)
| | | | - Gerard Leblon
- Institut de Génétique et de Microbiologie; CNRS UMR 8621; Univ Paris-Sud; Orsay Cedex; France
| | - Michael DuBow
- Institut de Génétique et de Microbiologie; CNRS UMR 8621; Univ Paris-Sud; Orsay Cedex; France
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