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Jucker T, Fischer FJ, Chave J, Coomes DA, Caspersen J, Ali A, Loubota Panzou GJ, Feldpausch TR, Falster D, Usoltsev VA, Adu‐Bredu S, Alves LF, Aminpour M, Angoboy IB, Anten NPR, Antin C, Askari Y, Muñoz R, Ayyappan N, Balvanera P, Banin L, Barbier N, Battles JJ, Beeckman H, Bocko YE, Bond‐Lamberty B, Bongers F, Bowers S, Brade T, van Breugel M, Chantrain A, Chaudhary R, Dai J, Dalponte M, Dimobe K, Domec J, Doucet J, Duursma RA, Enríquez M, van Ewijk KY, Farfán‐Rios W, Fayolle A, Forni E, Forrester DI, Gilani H, Godlee JL, Gourlet‐Fleury S, Haeni M, Hall JS, He J, Hemp A, Hernández‐Stefanoni JL, Higgins SI, Holdaway RJ, Hussain K, Hutley LB, Ichie T, Iida Y, Jiang H, Joshi PR, Kaboli H, Larsary MK, Kenzo T, Kloeppel BD, Kohyama T, Kunwar S, Kuyah S, Kvasnica J, Lin S, Lines ER, Liu H, Lorimer C, Loumeto J, Malhi Y, Marshall PL, Mattsson E, Matula R, Meave JA, Mensah S, Mi X, Momo S, Moncrieff GR, Mora F, Nissanka SP, O'Hara KL, Pearce S, Pelissier R, Peri PL, Ploton P, Poorter L, Pour MJ, Pourbabaei H, Dupuy‐Rada JM, Ribeiro SC, Ryan C, Sanaei A, Sanger J, Schlund M, Sellan G, Shenkin A, Sonké B, Sterck FJ, Svátek M, Takagi K, Trugman AT, Ullah F, Vadeboncoeur MA, Valipour A, Vanderwel MC, Vovides AG, Wang W, Wang L, Wirth C, Woods M, Xiang W, Ximenes FDA, Xu Y, Yamada T, Zavala MA. Tallo: A global tree allometry and crown architecture database. GLOBAL CHANGE BIOLOGY 2022; 28:5254-5268. [PMID: 35703577 PMCID: PMC9542605 DOI: 10.1111/gcb.16302] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 05/12/2022] [Accepted: 06/06/2022] [Indexed: 06/15/2023]
Abstract
Data capturing multiple axes of tree size and shape, such as a tree's stem diameter, height and crown size, underpin a wide range of ecological research-from developing and testing theory on forest structure and dynamics, to estimating forest carbon stocks and their uncertainties, and integrating remote sensing imagery into forest monitoring programmes. However, these data can be surprisingly hard to come by, particularly for certain regions of the world and for specific taxonomic groups, posing a real barrier to progress in these fields. To overcome this challenge, we developed the Tallo database, a collection of 498,838 georeferenced and taxonomically standardized records of individual trees for which stem diameter, height and/or crown radius have been measured. These data were collected at 61,856 globally distributed sites, spanning all major forested and non-forested biomes. The majority of trees in the database are identified to species (88%), and collectively Tallo includes data for 5163 species distributed across 1453 genera and 187 plant families. The database is publicly archived under a CC-BY 4.0 licence and can be access from: https://doi.org/10.5281/zenodo.6637599. To demonstrate its value, here we present three case studies that highlight how the Tallo database can be used to address a range of theoretical and applied questions in ecology-from testing the predictions of metabolic scaling theory, to exploring the limits of tree allometric plasticity along environmental gradients and modelling global variation in maximum attainable tree height. In doing so, we provide a key resource for field ecologists, remote sensing researchers and the modelling community working together to better understand the role that trees play in regulating the terrestrial carbon cycle.
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Affiliation(s)
- Tommaso Jucker
- School of Biological SciencesUniversity of BristolBristolUK
| | | | - Jérôme Chave
- Laboratoire Évolution et Diversité Biologique (EDB)UMR 5174 (CNRS/IRD/UPS)Toulouse Cedex 9France
- Université ToulouseToulouse Cedex 9France
| | - David A. Coomes
- Conservation Research InstituteUniversity of CambridgeCambridgeUK
| | - John Caspersen
- Institute of Forestry and ConservationUniversity of TorontoTorontoOntarioCanada
| | - Arshad Ali
- Forest Ecology Research Group, College of Life SciencesHebei UniversityBaodingHebeiChina
| | - Grace Jopaul Loubota Panzou
- Université de Liège, Gembloux Agro‐Bio TechGemblouxBelgium
- Laboratoire de Biodiversité, de Gestion des Ecosystèmes et de l'Environnement (LBGE), Faculté des Sciences et TechniquesUniversité Marien NgouabiBrazzavilleRepublic of Congo
| | - Ted R. Feldpausch
- College of Life and Environmental SciencesUniversity of ExeterExeterUK
| | - Daniel Falster
- Evolution & Ecology Research CentreUniversity of New South Wales SydneySydneyNew South WalesAustralia
| | - Vladimir A. Usoltsev
- Department of ForestryUral State Forest Engineering UniversityYekaterinburgRussia
- Department of Forest DynamicsBotanical Garden of the Ural Branch of Russian Academy of SciencesYekaterinburgRussia
| | - Stephen Adu‐Bredu
- Forestry Research Institute of Ghana, Council for Scientific and Industrial ResearchUniversityKumasiGhana
| | - Luciana F. Alves
- Center for Tropical Research, Institute of the Environment and SustainabilityUniversity of California Los AngelesLos AngelesCaliforniaUSA
| | - Mohammad Aminpour
- Natural Recourses and Watershed Management Office, West Azerbaijan ProvinceUrmiaIran
| | - Ilondea B. Angoboy
- Institut National pour l'Etude et la Recherche AgronimiquesDemocratic Republic of the Congo
| | - Niels P. R. Anten
- Center for Crop Systems AnalysisWageningen UniversityWageningenThe Netherlands
| | - Cécile Antin
- AMAP LabMontpellier University, IRD, CIRAD, CNRS, INRAEMontpellierFrance
| | - Yousef Askari
- Research Division of Natural Resources, Kohgiluyeh and Boyerahmad Agriculture and Natural Resources Research and Education Center, AREEOYasoujIran
| | - Rodrigo Muñoz
- Departamento de Ecología y Recursos Naturales, Facultad de CienciasUniversidad Nacional Autónoma de México, CoyoacánCiudad de MéxicoMexico
- Forest Ecology and Forest Management GroupWageningen UniversityWageningenThe Netherlands
| | | | - Patricia Balvanera
- Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de MéxicoMoreliaMichoacánMexico
| | | | - Nicolas Barbier
- AMAP LabMontpellier University, IRD, CIRAD, CNRS, INRAEMontpellierFrance
| | | | - Hans Beeckman
- Service of Wood BiologyRoyal Museum for Central AfricaTervurenBelgium
| | - Yannick E. Bocko
- Laboratoire de Biodiversité, de Gestion des Ecosystèmes et de l'Environnement (LBGE), Faculté des Sciences et TechniquesUniversité Marien NgouabiBrazzavilleRepublic of Congo
| | - Ben Bond‐Lamberty
- Pacific Northwest National LaboratoryJoint Global Change Research InstituteCollege ParkMarylandUSA
| | - Frans Bongers
- Forest Ecology and Forest Management GroupWageningen UniversityWageningenThe Netherlands
| | - Samuel Bowers
- School of GeoSciencesUniversity of EdinburghEdinburghUK
| | - Thomas Brade
- School of GeoSciencesUniversity of EdinburghEdinburghUK
| | - Michiel van Breugel
- Yale‐NUS CollegeSingapore
- ForestGEOSmithsonian Tropical Research InstituteApartadoPanamaRepublic of Panama
- Department of GeographyNational University of SingaporeSingapore
| | | | - Rajeev Chaudhary
- Division Forest OfficeMinistry of ForestDhangadhiSudurpashchim ProvinceNepal
| | - Jingyu Dai
- College of Urban and Environmental Sciences and MOE Laboratory for Earth Surface ProcessesPeking UniversityBeijingChina
| | - Michele Dalponte
- Research and Innovation Centre, Fondazione Edmund MachSan Michele all'AdigeItaly
| | - Kangbéni Dimobe
- Institut des Sciences de l'Environnement et du Développement Rural (ISEDR)Université de DédougouDédougouBurkina Faso
| | - Jean‐Christophe Domec
- Bordeaux Sciences Agro‐UMR ISPA, INRAEBordeauxFrance
- Nicholas School of the EnvironmentDuke UniversityDurhamNCUSA
| | | | | | - Moisés Enríquez
- Departamento de Ecología y Recursos Naturales, Facultad de CienciasUniversidad Nacional Autónoma de México, CoyoacánCiudad de MéxicoMexico
| | - Karin Y. van Ewijk
- Department of Geography and Planning, Queen's UniversityKingstonOntarioCanada
| | | | | | - Eric Forni
- CIRAD, UPR Forêts et SociétésMontpellierFrance
| | | | - Hammad Gilani
- Institute of Space Technology, Islamabad HighwayIslamabadPakistan
| | | | | | - Matthias Haeni
- Swiss Federal Research Institute WSLBirmensdorfSwitzerland
| | - Jefferson S. Hall
- ForestGEOSmithsonian Tropical Research InstituteApartadoPanamaRepublic of Panama
| | - Jie‐Kun He
- Spatial Ecology Lab, School of Life SciencesSouth China Normal UniversityGuangzhouGuangdongChina
| | - Andreas Hemp
- Department of Plant SystematicsUniversity of BayreuthBayreuthGermany
| | | | | | | | - Kiramat Hussain
- Gilgit‐Baltistan Forest Wildlife and Environment DepartmentGilgitPakistan
| | - Lindsay B. Hutley
- Research Institute for the Environment & LivelihoodsCharles Darwin UniversityCasuarinaNorthern TerritoryAustralia
| | - Tomoaki Ichie
- Faculty of Agriculture and Marine ScienceKochi UniversityNankokuKochiJapan
| | - Yoshiko Iida
- Forestry and Forest Products Research InstituteTsukubaIbarakiJapan
| | - Hai‐sheng Jiang
- Spatial Ecology Lab, School of Life SciencesSouth China Normal UniversityGuangzhouGuangdongChina
| | | | - Hasan Kaboli
- Faculty of Desert Studies Semnan UniversitySemnanIran
| | | | - Tanaka Kenzo
- Japan International Research Center for Agricultural SciencesTsukubaIbarakiJapan
| | - Brian D. Kloeppel
- Department of Geosciences and Natural ResourcesWestern Carolina UniversityCullowheeNorth CarolinaUSA
- Graduate School and ResearchWestern Carolina UnversityCullowheeNorth CarolinaUSA
| | - Takashi Kohyama
- Faculty of Environmental Earth ScienceHokkaido UniversitySapporoJapan
| | - Suwash Kunwar
- Division Forest OfficeMinistry of ForestDhangadhiSudurpashchim ProvinceNepal
- Department of Forest Resources Management, College of ForestryNanjing Forestry UniversityNanjingJiangsuChina
| | - Shem Kuyah
- Jomo Kenyatta University of Agriculture and Technology (JKUAT)NairobiKenya
| | - Jakub Kvasnica
- Department of Forest Botany, Dendrology and Geobiocoenology, Faculty of Forestry and Wood TechnologyMendel University in BrnoBrnoCzech Republic
| | - Siliang Lin
- Guangdong Provincial Key Laboratory of High Technology for Plant Protection, Plant Protection Research InstituteGuangdong Academy of Agricultural SciencesGuangzhouGuangdongChina
| | - Emily R. Lines
- Department of GeographyUniversity of CambridgeCambridgeUK
| | - Hongyan Liu
- College of Urban and Environmental Sciences and MOE Laboratory for Earth Surface ProcessesPeking UniversityBeijingChina
| | - Craig Lorimer
- Department of Forest and Wildlife EcologyUniversity of Wisconsin‐MadisonMadisonWisconsinUSA
| | - Jean‐Joël Loumeto
- Laboratoire de Biodiversité, de Gestion des Ecosystèmes et de l'Environnement (LBGE), Faculté des Sciences et TechniquesUniversité Marien NgouabiBrazzavilleRepublic of Congo
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the EnvironmentUniversity of OxfordOxfordUK
| | - Peter L. Marshall
- Faculty of ForestryUniversity of British ColumbiaVancouverBritish ColumbiaCanada
| | - Eskil Mattsson
- IVL Swedish Environmental Research InstituteGöteborgSweden
- Gothenburg Global Biodiversity Centre (GGBC), GothenburgSweden
| | - Radim Matula
- Faculty of Forestry and Wood SciencesCzech University of Life Sciences Prague, Prague 6SuchdolCzech Republic
| | - Jorge A. Meave
- Departamento de Ecología y Recursos Naturales, Facultad de CienciasUniversidad Nacional Autónoma de México, CoyoacánCiudad de MéxicoMexico
| | - Sylvanus Mensah
- Laboratoire de Biomathématiques et d'Estimations Forestières, Faculté des Sciences AgronomiquesUniversité d'Abomey CalaviCotonouBenin
| | - Xiangcheng Mi
- State Key Laboratory of Vegetation and Environmental Change, Institute of BotanyChinese Academy of SciencesBeijingChina
| | - Stéphane Momo
- AMAP LabMontpellier University, IRD, CIRAD, CNRS, INRAEMontpellierFrance
- Laboratoire de Botanique systématique et d'Ecologie, Département des Sciences Biologiques, Ecole Normale SupérieureUniversité de Yaoundé IYaoundéCameroon
| | - Glenn R. Moncrieff
- Fynbos Node, South African Environmental Observation NetworkClaremontSouth Africa
- Centre for Statistics in Ecology, Environment and Conservation, Department of Statistical SciencesUniversity of Cape TownRondeboschSouth Africa
| | - Francisco Mora
- Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de MéxicoMoreliaMichoacánMexico
| | - Sarath P. Nissanka
- Department of Crop Science, Faculty of AgricultureUniversity of PeradeniyaPeradeniyaSri Lanka
| | | | | | - Raphaël Pelissier
- AMAP LabMontpellier University, IRD, CIRAD, CNRS, INRAEMontpellierFrance
| | - Pablo L. Peri
- Universidad Nacional de la Patagonia Austral (UNPA) ‐ Instituto Nacional de Tecnología Agropecuaria (INTA) ‐ CONICETRío GallegosSanta CruzArgentina
| | - Pierre Ploton
- AMAP LabMontpellier University, IRD, CIRAD, CNRS, INRAEMontpellierFrance
| | - Lourens Poorter
- Forest Ecology and Forest Management GroupWageningen UniversityWageningenThe Netherlands
| | | | - Hassan Pourbabaei
- Department of Forestry, Faculty of Natural ResourcesUniversity of GuilanSomehsaraIran
| | - Juan Manuel Dupuy‐Rada
- Centro de Investigación Científica de Yucatán A.C., Unidad de Recursos NaturalesMéridaYucatánMexico
| | - Sabina C. Ribeiro
- Centro de Ciências Biológicas e da NaturezaUniversidade Federal do Acre, Campus UniversitárioRio BrancoBrazil
| | - Casey Ryan
- School of GeoSciencesUniversity of EdinburghEdinburghUK
| | - Anvar Sanaei
- Systematic Botany and Functional Biodiversity, Institute of BiologyLeipzig UniversityLeipzigGermany
| | | | - Michael Schlund
- Department of Natural Resources, Faculty of Geo‐information Science and Earth Observation (ITC)University of TwenteEnschedeThe Netherlands
| | - Giacomo Sellan
- UMR EcoFoG, CNRSKourouFrench Guiana
- Department of Natural SciencesManchester Metropolitan UniversityManchesterUK
| | - Alexander Shenkin
- Environmental Change Institute, School of Geography and the EnvironmentUniversity of OxfordOxfordUK
| | - Bonaventure Sonké
- Laboratoire de Botanique systématique et d'Ecologie, Département des Sciences Biologiques, Ecole Normale SupérieureUniversité de Yaoundé IYaoundéCameroon
| | - Frank J. Sterck
- Forest Ecology and Forest Management GroupWageningen UniversityWageningenThe Netherlands
| | - Martin Svátek
- Department of Forest Botany, Dendrology and Geobiocoenology, Faculty of Forestry and Wood TechnologyMendel University in BrnoBrnoCzech Republic
| | - Kentaro Takagi
- Field Science Center for Northern BiosphereHokkaido UniversityHoronobeJapan
| | - Anna T. Trugman
- Department of GeographyUniversity of California Santa BarbaraSanta BarbaraCaliforniaUSA
| | - Farman Ullah
- Forest Ecology Research Group, College of Life SciencesHebei UniversityBaodingHebeiChina
- Department of Forest Resources Management, College of ForestryNanjing Forestry UniversityNanjingJiangsuChina
| | | | - Ahmad Valipour
- Department of Forestry and The Center for Research and Development of Northern Zagros ForestryUniversity of KurdistanErbilIran
| | | | - Alejandra G. Vovides
- School of Geographical and Earth SciencesUniversity of Glasgow, East QuadrangleGlasgowUK
| | - Weiwei Wang
- State Key Laboratory of Vegetation and Environmental Change, Institute of BotanyChinese Academy of SciencesBeijingChina
| | - Li‐Qiu Wang
- Department of Forest Resources Management, College of ForestryNanjing Forestry UniversityNanjingJiangsuChina
| | - Christian Wirth
- Systematic Botany and Functional Biodiversity, Institute of BiologyUniversity of LeipzigLeipzigGermany
- German Centre for Integrative Biodiversity Research (iDiv) Halle‐Jena‐LeipzigLeipzigGermany
| | - Murray Woods
- Ontario Ministry of Natural ResourcesNorth BayOntarioCanada
| | - Wenhua Xiang
- Faculty of Life Science and TechnologyCentral South University of Forestry and TechnologyChangshaHunanChina
| | | | - Yaozhan Xu
- State Key Laboratory of Aquatic Botany and Watershed EcologyWuhan Botanical Garden, Chinese Academy of SciencesWuhanChina
- Center of Conservation Biology, Core Botanical GardensChinese Academy of SciencesWuhanChina
| | - Toshihiro Yamada
- Graduate School of Integrated Sciences of LifeHiroshima UniversityHiroshimaJapan
| | - Miguel A. Zavala
- Forest Ecology and Restoration Group (FORECO), Departamento de Ciencias de la VidaUniversidad de AlcaláMadridSpain
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Lindh M, Falster DS, Zhang L, Dieckmann U, Brännström Å. Latitudinal effects on crown shape evolution. Ecol Evol 2018; 8:8149-8158. [PMID: 30250691 PMCID: PMC6144995 DOI: 10.1002/ece3.4275] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2017] [Revised: 03/29/2018] [Accepted: 05/15/2018] [Indexed: 11/11/2022] Open
Abstract
Large variations in crown shape are observed across the globe, from plants with wide and deep crowns to those with leaves clustered at the top. While there have been advances in the large-scale monitoring of forests, little is known about factors driving variations in crown shape with environmental conditions. Previous theoretical research suggests a gradient in crown shape with latitude, due to the effects of sun angle. Yet, it remains unclear whether such changes are also predicted under competition. Using a size-structured forest-growth model that incorporates self-shading from plants and competitive shading from their neighbors, we investigate how changes in site productivity and sun angle shape crown evolution. We consider evolution in two traits describing the top-heaviness and width-to-height ratio of crowns, shaped by trade-offs reflecting the costs and benefits of alternative architectures. In top-heavy trees, most of the leaves are at the top half of the trunk. We show that, contrary to common belief, the angle of sun beams per se has only a weak influence on crown shapes, except at low site productivity. By contrast, reduced site productivity has a strong effect, with trees growing in less productive sites keeping their leaves closer to the ground. The crown width-to-height ratio is generally higher at a lower site productivity, but this trait is not strongly influenced by any environmental factor. This theoretical analysis brings into question established beliefs about the effects of latitude on crown shapes. By introducing geometry-related growth constraints caused by shading from both the surrounding forest and the tree on itself, and costs for constructing and maintaining a three-dimensional crown, our analysis suggests crown shapes may vary with latitude, mostly via effects on overall site productivity, and less because of the angle of the sun.
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Affiliation(s)
- Magnus Lindh
- Magnus Lindh, Department of Physical GeographyStockholm UniversityStockholmSweden
| | - Daniel S. Falster
- Evolution & Ecology Research Centre, and School of Biological, Earth and Environmental SciencesUniversity of New South WalesSydneyNSWAustralia
| | - Lai Zhang
- School of Mathematical ScienceYangzhou UniversityYangzhouChina
| | - Ulf Dieckmann
- Evolution and Ecology ProgramInternational Institute for Applied Systems AnalysisLaxenburgAustria
| | - Åke Brännström
- Evolution and Ecology ProgramInternational Institute for Applied Systems AnalysisLaxenburgAustria
- Department of Mathematics and Mathematical StatisticsUmeå UniversityUmeåSweden
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Weng E, Farrior CE, Dybzinski R, Pacala SW. Predicting vegetation type through physiological and environmental interactions with leaf traits: evergreen and deciduous forests in an earth system modeling framework. GLOBAL CHANGE BIOLOGY 2017; 23:2482-2498. [PMID: 27782353 DOI: 10.1111/gcb.13542] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2016] [Revised: 10/17/2016] [Accepted: 10/18/2016] [Indexed: 06/06/2023]
Abstract
Earth system models are incorporating plant trait diversity into their land components to better predict vegetation dynamics in a changing climate. However, extant plant trait distributions will not allow extrapolations to novel community assemblages in future climates, which will require a mechanistic understanding of the trade-offs that determine trait diversity. In this study, we show how physiological trade-offs involving leaf mass per unit area (LMA), leaf lifespan, leaf nitrogen, and leaf respiration may explain the distribution patterns of evergreen and deciduous trees in the temperate and boreal zones based on (1) an evolutionary analysis of a simple mathematical model and (2) simulation experiments of an individual-based dynamic vegetation model (i.e., LM3-PPA). The evolutionary analysis shows that these leaf traits set up a trade-off between carbon- and nitrogen-use efficiency at the scale of individual trees and therefore determine competitively dominant leaf strategies. As soil nitrogen availability increases, the dominant leaf strategy switches from one that is high in nitrogen-use efficiency to one that is high in carbon-use efficiency or, equivalently, from high-LMA/long-lived leaves (i.e., evergreen) to low-LMA/short-lived leaves (i.e., deciduous). In a region of intermediate soil nitrogen availability, the dominant leaf strategy may be either deciduous or evergreen depending on the initial conditions of plant trait abundance (i.e., founder controlled) due to feedbacks of leaf traits on soil nitrogen mineralization through litter quality. Simulated successional patterns by LM3-PPA from the leaf physiological trade-offs are consistent with observed successional dynamics of evergreen and deciduous forests at three sites spanning the temperate to boreal zones.
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Affiliation(s)
- Ensheng Weng
- Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ, 08544, USA
| | - Caroline E Farrior
- Department of Integrative Biology, University of Texas at Austin, Austin, TX, 78712, USA
| | - Ray Dybzinski
- Institute of Environmental Sustainability, Loyola University Chicago, Chicago, IL, 60660, USA
| | - Stephen W Pacala
- Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ, 08544, USA
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