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Hird C, Barham KE, Franklin CE. Looking beyond the mean: quantile regression for comparative physiologists. J Exp Biol 2024; 227:jeb247122. [PMID: 38323449 PMCID: PMC10949063 DOI: 10.1242/jeb.247122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Accepted: 02/01/2024] [Indexed: 02/08/2024]
Abstract
Statistical analyses that physiologists use to test hypotheses predominantly centre on means, but the tail ends of the response distribution can behave quite differently and underpin important scientific phenomena. We demonstrate that quantile regression (QR) offers a way to bypass some limitations of least squares regression (LSR) by building a picture of independent variable effects across the whole distribution of a dependent variable. We used LSR and QR with simulated and real datasets. With simulated data, LSR showed no change in the mean response but missed significant effects in the tails of the distribution found using QR. With real data, LSR showed a significant change in the mean response but missed a lack of response in the upper quantiles which was biologically revealing. Together, this highlights that QR can help to ask and answer more questions about variation in nature.
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Affiliation(s)
- Coen Hird
- School of the Environment, The University of Queensland, Brisbane (Magandjin), QLD 4072, Australia
| | - Kaitlin E. Barham
- School of the Environment, The University of Queensland, Brisbane (Magandjin), QLD 4072, Australia
| | - Craig E. Franklin
- School of the Environment, The University of Queensland, Brisbane (Magandjin), QLD 4072, Australia
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Cones AG, Schneider ER, Westneat DF. The incubation environment does not explain significant variation in heart rate plasticity among avian embryos. J Exp Biol 2024; 227:jeb247120. [PMID: 38456553 PMCID: PMC10949066 DOI: 10.1242/jeb.247120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Accepted: 01/29/2024] [Indexed: 03/09/2024]
Abstract
The conditions an organism experiences during development can modify how they plastically respond to short-term changes in their environment later in life. This can be adaptive because the optimal average trait value and the optimal plastic change in trait value in response to the environment may differ across different environments. For example, early developmental temperatures can adaptively modify how reptiles, fish and invertebrates metabolically respond to temperature. However, whether individuals within populations respond differently (a prerequisite to adaptive evolution), and whether this occurs in birds, which are only ectothermic for part of their life cycle, is not known. We experimentally tested these possibilities by artificially incubating the embryos of Pekin ducks (Anas platyrhynchos domesticus) at constant or variable temperatures. We measured their consequent heart rate reaction norms to short-term changes in egg temperature and tracked their growth. Contrary to expectations, the early thermal environment did not modify heart rate reaction norms, but regardless, these reaction norms differed among individuals. Embryos with higher average heart rates were smaller upon hatching, but heart rate reaction norms did not predict subsequent growth. Our data also suggests that the thermal environment may affect both the variance in heart rate reaction norms and their covariance with growth. Thus, individual avian embryos can vary in their plasticity to temperature, and in contrast to fully ectothermic taxa, the early thermal environment does not explain this variance. Because among-individual variation is one precondition to adaptive evolution, the factors that do contribute to such variability may be important.
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Affiliation(s)
- Alexandra G. Cones
- Department of Biology, University of Kentucky, 101 Thomas Hunt Morgan Building, Lexington, KY 40506, USA
| | - Eve R. Schneider
- Department of Biology, University of Kentucky, 101 Thomas Hunt Morgan Building, Lexington, KY 40506, USA
| | - David F. Westneat
- Department of Biology, University of Kentucky, 101 Thomas Hunt Morgan Building, Lexington, KY 40506, USA
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Gvoždík L. Individual variation in thermally induced plasticity of metabolic rates: ecological and evolutionary implications for a warming world. Philos Trans R Soc Lond B Biol Sci 2024; 379:20220494. [PMID: 38186270 PMCID: PMC10772608 DOI: 10.1098/rstb.2022.0494] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Accepted: 09/11/2023] [Indexed: 01/09/2024] Open
Abstract
Energy metabolism is a fundamental property of life providing the energy for all processes and functions within an organism. As it is temperature-dependent, it mediates the effects of changing climate on ectotherm fitness and population dynamics. Though resting metabolic rate is a highly labile trait, part of its variation is individually consistent. Recent findings show that resting metabolic rate contains consistent variation not only in the elevations (intercepts) but also in the slopes of individual thermal dependence curves, challenging the thermal dependence assumption for this trait in several ectotherm taxa. I argue that among-individual variation in thermal metabolic curves represents a previously undetected component of ectotherm response to climate change, potentially affecting their adaptive capacity and population resilience under increasing stochasticity of thermal environment. Future studies need to examine not only the amount of among-individual variation in thermal metabolic curves across phylogenetic contexts but also other aspects concerning its mechanisms and adaptive significance to improve predictions about the impact of climate change on ectotherm population dynamics. This article is part of the theme issue 'The evolutionary significance of variation in metabolic rates'.
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Affiliation(s)
- Lumír Gvoždík
- Czech Academy of Sciences, Institute of Vertebrate Biology, Květná 8, 60300 Brno, Czech Republic
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Husain M, Rundle HD, Careau V. Among- and Within-Individual Variance in Metabolic Thermal Reaction Norms. ECOLOGICAL AND EVOLUTIONARY PHYSIOLOGY 2024; 97:64-70. [PMID: 38717371 DOI: 10.1086/729925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2024]
Abstract
AbstractIn ectotherms, temperature has a strong effect on metabolic rate (MR), yet the extent to which the thermal sensitivity of MR varies among versus within individuals is largely unknown. This is of interest because significant among-individual variation is a prerequisite for the evolution of metabolic thermal sensitivity. Here, we estimated the repeatability (R) of the thermal sensitivity of MR in individual virgin, adult male Drosophila melanogaster (N = 316 ) by taking repeated overnight measures of their MRs at two temperatures (~24°C and ~27°C). At the population level, thermal sensitivity decreased with locomotor activity, and older individuals showed a higher thermal sensitivity of MR than younger individuals. Taking these effects (and body mass) into account, we detected significant repeatability in both the centered intercept (R int = 0.52 ± 0.04 ) and the slope (R slp = 0.21 ± 0.07 ) of the metabolic thermal reaction norms, which respectively represent average MR and thermal sensitivity of MR. Furthermore, individuals with a higher overall MR also displayed greater increases in MR as temperature increased from ~24°C to ~27°C (r ind = 0.32 ± 0.14 ). Average MR and thermal sensitivity of MR were also positively correlated within individuals (r e = 0.15 ± 0.07 ). Our study represents a point of departure for future larger studies, in which more complex protocols (e.g., wider temperature range, breeding design) can be applied to quantify the causal components of variation in thermal sensitivity that are needed to make accurate predictions of adaptive responses to global warming.
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Friesen CR, Wapstra E, Olsson M. Of telomeres and temperature: Measuring thermal effects on telomeres in ectothermic animals. Mol Ecol 2022; 31:6069-6086. [PMID: 34448287 DOI: 10.1111/mec.16154] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Revised: 07/20/2021] [Accepted: 08/23/2021] [Indexed: 01/31/2023]
Abstract
Ectotherms are classic models for understanding life-history tradeoffs, including the reproduction-somatic maintenance tradeoffs that may be reflected in telomere length and their dynamics. Importantly, life-history traits of ectotherms are tightly linked to their thermal environment, with diverse or synergistic mechanistic explanations underpinning the variation. Telomere dynamics potentially provide a mechanistic link that can be used to monitor thermal effects on individuals in response to climatic perturbations. Growth rate, age and developmental stage are all affected by temperature, which interacts with telomere dynamics in complex and intriguing ways. The physiological processes underpinning telomere dynamics can be visualized and understood using thermal performance curves (TPCs). TPCs reflect the evolutionary history and the thermal environment during an individual's ontogeny. Telomere maintenance should be enhanced at or near the thermal performance optimum of a species, population and individual. The thermal sensitivity of telomere dynamics should reflect the interacting TPCs of the processes underlying them. The key processes directly underpinning telomere dynamics are mitochondrial function (reactive oxygen production), antioxidant activity, telomerase activity and telomere endcap protein status. We argue that identifying TPCs for these processes will significantly help design robust, repeatable experiments and field studies of telomere dynamics in ectotherms. Conceptually, TPCs are a valuable framework to predict and interpret taxon- and population-specific telomere dynamics across thermal regimes. The literature of thermal effects on telomeres in ectotherms is sparse and mostly limited to vertebrates, but our conclusions and recommendations are relevant across ectothermic animals.
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Affiliation(s)
- Christopher R Friesen
- School of Earth, Atmospheric and Life Sciences, The University of Wollongong, Wollongong, New South Wales, Australia.,School of Life and Environmental Sciences, University of Sydney, Sydney, New South Wales, Australia
| | - Erik Wapstra
- School of Natural Sciences, University of Tasmania, Hobart, Tasmania, Australia
| | - Mats Olsson
- School of Earth, Atmospheric and Life Sciences, The University of Wollongong, Wollongong, New South Wales, Australia.,Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
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Hau M, Deimel C, Moiron M. Great tits differ in glucocorticoid plasticity in response to spring temperature. Proc Biol Sci 2022; 289:20221235. [PMID: 36350212 PMCID: PMC9653245 DOI: 10.1098/rspb.2022.1235] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Accepted: 10/14/2022] [Indexed: 09/05/2023] Open
Abstract
Fluctuations in environmental temperature affect energy metabolism and stimulate the expression of reversible phenotypic plasticity in vertebrate behavioural and physiological traits. Changes in circulating concentrations of glucocorticoid hormones often underpin environmentally induced phenotypic plasticity. Ongoing climate change is predicted to increase fluctuations in environmental temperature globally, making it imperative to determine the standing phenotypic variation in glucocorticoid responses of free-living populations to evaluate their potential for coping via plastic or evolutionary changes. Using a reaction norm approach, we repeatedly sampled wild great tit (Parus major) individuals for circulating glucocorticoid concentrations during reproduction across five years to quantify individual variation in glucocorticoid plasticity along an environmental temperature gradient. As expected, baseline and stress-induced glucocorticoid concentrations increased with lower environmental temperatures at the population and within-individual level. Moreover, we provide unique evidence that individuals differ significantly in their plastic responses to the temperature gradient for both glucocorticoid traits, with some displaying greater plasticity than others. Average concentrations and degree of plasticity covaried for baseline glucocorticoids, indicating that these two reaction norm components are linked. Hence, individual variation in glucocorticoid plasticity in response to a key environmental factor exists in a wild vertebrate population, representing a crucial step to assess their potential to endure temperature fluctuations.
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Affiliation(s)
- Michaela Hau
- Max Planck Institute for Ornithology, Seewiesen, Germany
- University of Konstanz, Konstanz, Germany
| | | | - Maria Moiron
- Institute of Avian Research, Wilhelmshaven, Germany
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Baškiera S, Gvoždík L. Individual Variation in Thermal Reaction Norms Reveals Metabolic-Behavioral Relationships in an Ectotherm. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.850941] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Ectothermic organisms respond to rapid environmental change through a combination of behavioral and physiological adjustments. As behavioral and physiological traits are often functionally linked, an effective ectotherm response to environmental perturbation will depend on the direction and magnitude of their association. The role of various modifiers in behavioral-physiological relationships remains largely unexplored. We applied a repeated-measures approach to examine the influence of body temperature and individual variation on the link between resting metabolic rate (RMR) and exploratory locomotor activity (ELA) in juvenile Alpine newts, Ichthyosaura alpestris. We analyzed trait relationships at two body temperatures separately and as parameters, intercepts and slopes, of thermal reaction norms for both traits. Body temperature affected the level of detectable among-individual variation in two different directions. Among-individual variation in ELA was detected at 12°C, while RMR was repeatable at 22°C. We found no support for a link between RMR and ELA at either temperature. While analysis of intercepts revealed among-individual variation in both traits, among-individual variation in slopes was detected in RMR only. Intercepts were positively associated at the individual, but not the whole-phenotypic, level. For ELA, the target of selection should be individual trait values across temperatures, rather than their thermal sensitivities. The positive association between intercepts of thermal reaction norms for ELA and RMR suggests that phenotypic selection acts on both traits in a correlated fashion. Measurements at one body temperature and within-individual variation hide the metabolic-behavioral relations. We conclude that correlative studies on flexible behavioral and physiological traits in ectotherms require repeated measurement at two or more body temperatures in order to avoid misleading results. This approach is needed to fully understand ectotherm responses to environmental change and its impact on their population dynamics.
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Abstract
AbstractPhenotypic plasticity is an important mechanism that allows populations to adjust to changing environments. Early life experiences can have lasting impacts on how individuals respond to environmental variation later in life (i.e., individual reaction norms), altering the capacity for populations to respond to selection. Here, we incubated lizard embryos (Lampropholis delicata) at two fluctuating developmental temperatures (cold = 23 ºC + / − 3 ºC, hot = 29 ºC + / − 3 ºC, ncold = 26, nhot = 25) to understand how it affected metabolic plasticity to temperature later in life. We repeatedly measured individual reaction norms across six temperatures 10 times over ~ 3.5 months (nobs = 3,818) to estimate the repeatability of average metabolic rate (intercept) and thermal plasticity (slope). The intercept and the slope of the population-level reaction norm was not affected by developmental temperature. Repeatability of average metabolic rate was, on average, 10% lower in hot incubated lizards but stable across all temperatures. The slope of the thermal reaction norm was overall moderately repeatable (R = 0.44, 95% CI = 0.035 – 0.93) suggesting that individual metabolic rate changed consistently with short-term changes in temperature, although credible intervals were quite broad. Importantly, reaction norm repeatability did not depend on early developmental temperature. Identifying factors affecting among-individual variation in thermal plasticity will be increasingly more important for terrestrial ectotherms living in changing climate. Our work implies that thermal metabolic plasticity is robust to early developmental temperatures and has the capacity to evolve, despite there being less consistent variation in metabolic rate under hot environments.
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