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Leonardelli M, Tissot N, Podolec R, Ares-Orpel F, Glauser G, Ulm R, Demarsy E. Photoreceptor-induced sinapate synthesis contributes to photoprotection in Arabidopsis. PLANT PHYSIOLOGY 2024; 196:1518-1533. [PMID: 38918833 PMCID: PMC11444301 DOI: 10.1093/plphys/kiae352] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 05/21/2024] [Accepted: 06/01/2024] [Indexed: 06/27/2024]
Abstract
Plants must balance light capture for photosynthesis with protection from potentially harmful ultraviolet (UV) radiation. Photoprotection is mediated by concerted action of photoreceptors, but the underlying molecular mechanisms are not fully understood. In this study, we provide evidence that UV RESISTANCE LOCUS 8 (UVR8) UV-B, phytochrome red, and cryptochrome blue-light photoreceptors converge on the induction of FERULIC ACID 5-HYDROXYLASE 1 (FAH1) that encodes a key enzyme in the phenylpropanoid biosynthesis pathway, leading to the accumulation of UV-absorbing sinapate esters in Arabidopsis (Arabidopsis thaliana). FAH1 induction depends on the basic leucine zipper transcription factors ELONGATED HYPOCOTYL 5 (HY5) and HY5 HOMOLOG that function downstream of all 3 photoreceptors. Noticeably, mutants with hyperactive UVR8 signaling rescue fah1 UV sensitivity. Targeted metabolite profiling suggests that this phenotypic rescue is due to the accumulation of UV-absorbing metabolites derived from precursors of sinapate synthesis, namely, coumaroyl glucose and feruloyl glucose. Our genetic dissection of the phenylpropanoid pathway combined with metabolomic and physiological analyses show that both sinapate esters and flavonoids contribute to photoprotection with sinapates playing a major role for UV screening. Our findings indicate that photoreceptor-mediated regulation of FAH1 and subsequent accumulation of sinapate "sunscreen" compounds are key protective mechanisms to mitigate damage, preserve photosynthetic performance, and ensure plant survival under UV.
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Affiliation(s)
- Manuela Leonardelli
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, CH-1211 Geneva, Switzerland
| | - Nicolas Tissot
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, CH-1211 Geneva, Switzerland
| | - Roman Podolec
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, CH-1211 Geneva, Switzerland
- Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, CH-1211 Geneva, Switzerland
| | - Florence Ares-Orpel
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, CH-1211 Geneva, Switzerland
| | - Gaétan Glauser
- Neuchâtel Platform of Analytical Chemistry, University of Neuchâtel, CH-2000 Neuchâtel, Switzerland
| | - Roman Ulm
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, CH-1211 Geneva, Switzerland
- Institute of Genetics and Genomics in Geneva (iGE3), University of Geneva, CH-1211 Geneva, Switzerland
| | - Emilie Demarsy
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, CH-1211 Geneva, Switzerland
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2
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Morales-Merida BE, Grimaldi-Olivas JC, Cruz-Mendívil A, Villicaña C, Valdez-Torres JB, Heredia JB, León-Chan RG, Lightbourn-Rojas LA, Monribot-Villanueva JL, Guerrero-Analco JA, Ruiz-May E, León-Félix J. Integrating Proteomics and Metabolomics Approaches to Elucidate the Mechanism of Responses to Combined Stress in the Bell Pepper ( Capsicum annuum). PLANTS (BASEL, SWITZERLAND) 2024; 13:1861. [PMID: 38999705 PMCID: PMC11244445 DOI: 10.3390/plants13131861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2024] [Revised: 06/21/2024] [Accepted: 07/03/2024] [Indexed: 07/14/2024]
Abstract
Bell pepper plants are sensitive to environmental changes and are significantly affected by abiotic factors such as UV-B radiation and cold, which reduce their yield and production. Various approaches, including omics data integration, have been employed to understand the mechanisms by which this crop copes with abiotic stress. This study aimed to find metabolic changes in bell pepper stems caused by UV-B radiation and cold by integrating omic data. Proteome and metabolome profiles were generated using liquid chromatography coupled with mass spectrometry, and data integration was performed in the plant metabolic pathway database. The combined stress of UV-B and cold induced the accumulation of proteins related to photosynthesis, mitochondrial electron transport, and a response to a stimulus. Further, the production of flavonoids and their glycosides, as well as affecting carbon metabolism, tetrapyrrole, and scopolamine pathways, were identified. We have made the first metabolic regulatory network map showing how bell pepper stems respond to cold and UV-B stress. We did this by looking at changes in proteins and metabolites that help with respiration, photosynthesis, and the buildup of photoprotective and antioxidant compounds.
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Affiliation(s)
- Brandon Estefano Morales-Merida
- Laboratorio de Biología Molecular y Genómica Funcional, Centro de Investigación en Alimentación y Desarrollo, A.C., Carretera a Eldorado Km 5.5, Campo el Diez, Culiacán 80110, Sinaloa, Mexico
| | - Jesús Christian Grimaldi-Olivas
- Laboratorio de Biología Molecular y Genómica Funcional, Centro de Investigación en Alimentación y Desarrollo, A.C., Carretera a Eldorado Km 5.5, Campo el Diez, Culiacán 80110, Sinaloa, Mexico
| | - Abraham Cruz-Mendívil
- CONAHCYT-Instituto Politécnico Nacional, Centro Interdisciplinario de Investigación para el Desarrollo Integral Regional Unidad Sinaloa, Guasave 81101, Sinaloa, Mexico
| | - Claudia Villicaña
- CONAHCYT-Laboratorio de Biología Molecular y Genómica Funcional, Centro de Investigación en Alimentación y Desarrollo, A.C., Carretera a Eldorado Km 5.5, Campo el Diez, Culiacán 80110, Sinaloa, Mexico
| | - José Benigno Valdez-Torres
- Laboratorio de Biología Molecular y Genómica Funcional, Centro de Investigación en Alimentación y Desarrollo, A.C., Carretera a Eldorado Km 5.5, Campo el Diez, Culiacán 80110, Sinaloa, Mexico
| | - J Basilio Heredia
- Laboratorio de Biología Molecular y Genómica Funcional, Centro de Investigación en Alimentación y Desarrollo, A.C., Carretera a Eldorado Km 5.5, Campo el Diez, Culiacán 80110, Sinaloa, Mexico
| | - Rubén Gerardo León-Chan
- Laboratorio de Genética, Instituto de Investigación Lightbourn, A.C., Carretera las Pampas Km 2.5, Jiménez 33980, Chihuahua, Mexico
| | - Luis Alberto Lightbourn-Rojas
- Laboratorio de Genética, Instituto de Investigación Lightbourn, A.C., Carretera las Pampas Km 2.5, Jiménez 33980, Chihuahua, Mexico
| | - Juan L Monribot-Villanueva
- Red de Estudios Moleculares Avanzados, Instituto de Ecología, A.C., Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa 91073, Veracruz, Mexico
| | - José A Guerrero-Analco
- Red de Estudios Moleculares Avanzados, Instituto de Ecología, A.C., Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa 91073, Veracruz, Mexico
| | - Eliel Ruiz-May
- Red de Estudios Moleculares Avanzados, Instituto de Ecología, A.C., Carretera Antigua a Coatepec 351, Congregación el Haya, Xalapa 91073, Veracruz, Mexico
| | - Josefina León-Félix
- Laboratorio de Biología Molecular y Genómica Funcional, Centro de Investigación en Alimentación y Desarrollo, A.C., Carretera a Eldorado Km 5.5, Campo el Diez, Culiacán 80110, Sinaloa, Mexico
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3
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Barnes PW, Robson TM, Zepp RG, Bornman JF, Jansen MAK, Ossola R, Wang QW, Robinson SA, Foereid B, Klekociuk AR, Martinez-Abaigar J, Hou WC, Mackenzie R, Paul ND. Interactive effects of changes in UV radiation and climate on terrestrial ecosystems, biogeochemical cycles, and feedbacks to the climate system. Photochem Photobiol Sci 2023; 22:1049-1091. [PMID: 36723799 PMCID: PMC9889965 DOI: 10.1007/s43630-023-00376-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 01/13/2023] [Indexed: 02/02/2023]
Abstract
Terrestrial organisms and ecosystems are being exposed to new and rapidly changing combinations of solar UV radiation and other environmental factors because of ongoing changes in stratospheric ozone and climate. In this Quadrennial Assessment, we examine the interactive effects of changes in stratospheric ozone, UV radiation and climate on terrestrial ecosystems and biogeochemical cycles in the context of the Montreal Protocol. We specifically assess effects on terrestrial organisms, agriculture and food supply, biodiversity, ecosystem services and feedbacks to the climate system. Emphasis is placed on the role of extreme climate events in altering the exposure to UV radiation of organisms and ecosystems and the potential effects on biodiversity. We also address the responses of plants to increased temporal variability in solar UV radiation, the interactive effects of UV radiation and other climate change factors (e.g. drought, temperature) on crops, and the role of UV radiation in driving the breakdown of organic matter from dead plant material (i.e. litter) and biocides (pesticides and herbicides). Our assessment indicates that UV radiation and climate interact in various ways to affect the structure and function of terrestrial ecosystems, and that by protecting the ozone layer, the Montreal Protocol continues to play a vital role in maintaining healthy, diverse ecosystems on land that sustain life on Earth. Furthermore, the Montreal Protocol and its Kigali Amendment are mitigating some of the negative environmental consequences of climate change by limiting the emissions of greenhouse gases and protecting the carbon sequestration potential of vegetation and the terrestrial carbon pool.
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Affiliation(s)
- P W Barnes
- Biological Sciences and Environment Program, Loyola University New Orleans, New Orleans, USA.
| | - T M Robson
- Organismal & Evolutionary Biology (OEB), Faculty of Biological and Environmental Sciences, Viikki Plant Sciences Centre (ViPS), University of Helsinki, Helsinki, Finland.
- National School of Forestry, University of Cumbria, Ambleside, UK.
| | - R G Zepp
- ORD/CEMM, US Environmental Protection Agency, Athens, GA, USA
| | - J F Bornman
- Food Futures Institute, Murdoch University, Perth, Australia
| | | | - R Ossola
- Atmospheric Chemistry Observations and Modeling Laboratory, National Center for Atmospheric Research, Boulder, USA
| | - Q-W Wang
- Institute of Applied Ecology, Chinese Academy of Sciences (CAS), Shenyang, China
| | - S A Robinson
- Global Challenges Program & School of Earth, Atmospheric and Life Sciences, Securing Antarctica's Environmental Future, University of Wollongong, Wollongong, Australia
| | - B Foereid
- Environment and Natural Resources, Norwegian Institute of Bioeconomy Research, Ås, Norway
| | - A R Klekociuk
- Antarctic Climate Program, Australian Antarctic Division, Kingston, Australia
| | - J Martinez-Abaigar
- Faculty of Science and Technology, University of La Rioja, Logroño (La Rioja), Spain
| | - W-C Hou
- Department of Environmental Engineering, National Cheng Kung University, Tainan City, Taiwan
| | - R Mackenzie
- Cape Horn International Center (CHIC), Puerto Williams, Chile
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, Chile
| | - N D Paul
- Lancaster Environment Centre, Lancaster University, Lancaster, UK
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Czégény G, Rácz A. Phenolic peroxidases: Dull generalists or purposeful specialists in stress responses? JOURNAL OF PLANT PHYSIOLOGY 2023; 280:153884. [PMID: 36543063 DOI: 10.1016/j.jplph.2022.153884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2022] [Revised: 11/11/2022] [Accepted: 11/27/2022] [Indexed: 06/17/2023]
Abstract
This study focuses on class III peroxidases (POD) (EC 1.11.1.7) as regulators of cellular H2O2 levels in leaves under oxidative stress. The effective regulation of reactive oxygen species (ROS) concentrations in plant tissues is crucial for plant survival, and has been extensively reviewed. However, the majority of studies regard POD as a generalist without substrate specificity. This is partly due to the fact that laboratory protocols assessing POD levels use substrates, which are not contained in plants. Here, we show that both base- and stress-inducible POD activity depends on the choice of substrate. Moreover, the application of diverse substrates, particularly those contained in plants, unmasks POD isoenzymes that are distinguished by substrate preferences. This functional heterogeneity of POD responses is worth studying, especially in parallel with stress-induced changes in the phenolic profiles.
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Affiliation(s)
- Gyula Czégény
- Department of Plant Biology, Faculty of Sciences, University of Pécs, H-7633, Ifjúság útja 6, Pécs, Hungary
| | - Arnold Rácz
- Department of Plant Biology, Faculty of Sciences, University of Pécs, H-7633, Ifjúság útja 6, Pécs, Hungary.
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5
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Liu S, Fang S, Cong B, Li T, Yi D, Zhang Z, Zhao L, Zhang P. The Antarctic Moss Pohlia nutans Genome Provides Insights Into the Evolution of Bryophytes and the Adaptation to Extreme Terrestrial Habitats. FRONTIERS IN PLANT SCIENCE 2022; 13:920138. [PMID: 35783932 PMCID: PMC9247546 DOI: 10.3389/fpls.2022.920138] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Accepted: 05/19/2022] [Indexed: 05/09/2023]
Abstract
The Antarctic continent has extreme natural environment and fragile ecosystem. Mosses are one of the dominant floras in the Antarctic continent. However, their genomic features and adaptation processes to extreme environments remain poorly understood. Here, we assembled the high-quality genome sequence of the Antarctic moss (Pohlia nutans) with 698.20 Mb and 22 chromosomes. We found that the high proportion of repeat sequences and a recent whole-genome duplication (WGD) contribute to the large size genome of P. nutans when compared to other bryophytes. The genome of P. nutans harbors the signatures of massive segmental gene duplications and large expansions of gene families, likely facilitating neofunctionalization. Genomic characteristics that may support the Antarctic lifestyle of this moss comprise expanded gene families involved in phenylpropanoid biosynthesis, unsaturated fatty acid biosynthesis, and plant hormone signal transduction. Additional contributions include the significant expansion and upregulation of several genes encoding DNA photolyase, antioxidant enzymes, flavonoid biosynthesis enzymes, possibly reflecting diverse adaptive strategies. Notably, integrated multi-omic analyses elucidate flavonoid biosynthesis may function as the reactive oxygen species detoxification under UV-B radiation. Our studies provide insight into the unique features of the Antarctic moss genome and their molecular responses to extreme terrestrial environments.
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Affiliation(s)
- Shenghao Liu
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
- School of Advanced Manufacturing, Fuzhou University, Jinjiang, China
| | - Shuo Fang
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
| | - Bailin Cong
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
- School of Advanced Manufacturing, Fuzhou University, Jinjiang, China
| | - Tingting Li
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
| | - Dan Yi
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
| | - Zhaohui Zhang
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
| | - Linlin Zhao
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China
- School of Advanced Manufacturing, Fuzhou University, Jinjiang, China
- *Correspondence: Linlin Zhao,
| | - Pengying Zhang
- National Glycoengineering Research Center, School of Life Sciences and Shandong University, Qingdao, China
- Pengying Zhang,
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Pescheck F, Rosenqvist E, Bilger W. Plants and UV-B radiation. PHYSIOLOGIA PLANTARUM 2021; 173:661-662. [PMID: 34671995 DOI: 10.1111/ppl.13577] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 09/30/2021] [Indexed: 06/13/2023]
Affiliation(s)
- Frauke Pescheck
- Botanical Institute and Botanical Garden, Christian-Albrechts-University of Kiel, Kiel, Germany
| | - Eva Rosenqvist
- Section of Crop Sciences, Institute of Plant and Environmental Sciences, University of Copenhagen, Tåstrup, Denmark
| | - Wolfgang Bilger
- Botanical Institute and Botanical Garden, Christian-Albrechts-University of Kiel, Kiel, Germany
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