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Xu J, Liu X, Cai C, Su W, Xie J, Zhang Z, Yang P, Lyu S, Li Z, Lei C, Chen H, Wang E, Ru B, Huang Y. Two cSNPs sites in the fatty acid-binding protein 4 ( FABP4) gene and their association analysis with body measurement data in five Chinese cattle breeds. Anim Biotechnol 2022; 33:1545-1552. [PMID: 34392778 DOI: 10.1080/10495398.2021.1916511] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Single nucleotide polymorphisms (SNPs) include the transition and transversion of a single base. In this study, we found two cSNPs (rs110757796 and rs110652478) in the FABP4 (fatty acid-binding protein 4) gene and tested their population genetic parameters in five Chinese cattle breeds. FABP4 is a key marker molecule for lipid production. It plays a crucial role in the growth and development of animals. Thus, we also analyze the association between the two cSNPs of FABP4 gene and body measurement data of Chinese cattle. Our results were indicated that rs110757796 was significantly associated with the chest width in Chinese cattle groups (p < 0.05). In addition, we tested the spatiotemporal expression profile of the bovine FABP4 gene and effect of genetic variation on its expression. It was found that bovine FABP4 gene has tissue-differential expression. Then, the genetic variation located on the exon has a certain effect on the expression of FABP4 gene in bovine muscle. Overall, our results provide that FABP4 could as a candidate gene to improve the progress of cattle molecular breeding.
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Affiliation(s)
- Jiawei Xu
- College of Animal Science and Technology, Northwest A&F University, Xianyang, People's Republic of China
| | - Xian Liu
- Henan Provincial Animal Husbandry General Station, Zhengzhou, People's Republic of China
| | - Cuicui Cai
- Guyuan Branch of Ningxia Academy of Agriculture and Forestry Sciences, Guyuan, People's Republic of China
| | - Woyu Su
- College of Animal Science and Technology, Northwest A&F University, Xianyang, People's Republic of China
| | - Jianliang Xie
- Guyuan Branch of Ningxia Academy of Agriculture and Forestry Sciences, Guyuan, People's Republic of China
| | - Zijing Zhang
- Institute of Animal Husbandry and Veterinary Science, Henan Academy of Agricultural Sciences, Zhengzhou, People's Republic of China
| | - Peng Yang
- College of Animal Science and Technology, Northwest A&F University, Xianyang, People's Republic of China
| | - Shijie Lyu
- Institute of Animal Husbandry and Veterinary Science, Henan Academy of Agricultural Sciences, Zhengzhou, People's Republic of China
| | - Zhiming Li
- Henan Provincial Animal Husbandry General Station, Zhengzhou, People's Republic of China
| | - Chuzhao Lei
- College of Animal Science and Technology, Northwest A&F University, Xianyang, People's Republic of China
| | - Hong Chen
- College of Animal Science and Technology, Northwest A&F University, Xianyang, People's Republic of China
| | - Eryao Wang
- Institute of Animal Husbandry and Veterinary Science, Henan Academy of Agricultural Sciences, Zhengzhou, People's Republic of China
| | - Baorui Ru
- Henan Provincial Animal Husbandry General Station, Zhengzhou, People's Republic of China
| | - Yongzhen Huang
- College of Animal Science and Technology, Northwest A&F University, Xianyang, People's Republic of China
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Valentine MJ, Ciraola B, Aliota MT, Vandenplas M, Marchi S, Tenebray B, Leparc-Goffart I, Gallagher CA, Beierschmitt A, Corey T, Dore KM, de Lamballerie X, Wang C, Murdock CC, Kelly PJ. No evidence for sylvatic cycles of chikungunya, dengue and Zika viruses in African green monkeys (Chlorocebus aethiops sabaeus) on St. Kitts, West Indies. Parasit Vectors 2020; 13:540. [PMID: 33126907 PMCID: PMC7598228 DOI: 10.1186/s13071-020-04419-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Accepted: 10/21/2020] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Dengue, chikungunya and Zika viruses (DENV, CHIKV and ZIKV) are transmitted in sylvatic transmission cycles between non-human primates and forest (sylvan) mosquitoes in Africa and Asia. It remains unclear if sylvatic cycles exist or could establish themselves elsewhere and contribute to the epidemiology of these diseases. The Caribbean island of St. Kitts has a large African green monkey (AGM) (Chlorocebus aethiops sabaeus) population and is therefore ideally suited to investigate sylvatic cycles. METHODS We tested 858 AGM sera by ELISA and PRNT for virus-specific antibodies and collected and identified 9704 potential arbovirus vector mosquitoes. Mosquitoes were homogenized in 513 pools for testing by viral isolation in cell culture and by multiplex RT-qPCR after RNA extraction to detect the presence of DENV, CHIKV and ZIKVs. DNA was extracted from 122 visibly blood-fed individual mosquitoes and a polymorphic region of the hydroxymethylbilane synthase gene (HMBS) was amplified by PCR to determine if mosquitoes had fed on AGMs or humans. RESULTS All of the AGMs were negative for DENV, CHIKV or ZIKV antibodies. However, one AGM did have evidence of an undifferentiated Flavivirus infection. Similarly, DENV, CHIKV and ZIKV were not detected in any of the mosquito pools by PCR or culture. AGMs were not the source of any of the mosquito blood meals. CONCLUSION Sylvatic cycles involving AGMs and DENV, CHIKV and ZIKV do not currently exist on St. Kitts.
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Affiliation(s)
- Matthew John Valentine
- One Health Centre for Zoonoses and Tropical Veterinary Medicine, Ross University School of Veterinary Medicine, West Farm, Basseterre, St. Kitts and Nevis
| | - Brenda Ciraola
- One Health Centre for Zoonoses and Tropical Veterinary Medicine, Ross University School of Veterinary Medicine, West Farm, Basseterre, St. Kitts and Nevis
| | | | - Michel Vandenplas
- Department of Biomedical Sciences, Ross University School of Veterinary Medicine, West Farm, Basseterre, St. Kitts and Nevis
| | - Silvia Marchi
- Department of Biomedical Sciences, Ross University School of Veterinary Medicine, West Farm, Basseterre, St. Kitts and Nevis
| | - Bernard Tenebray
- National Reference Laboratory for Arboviruses, Institut de Recherche Biomédicale des Armées, Marseille, France
- Unité des Virus Emergents (UVE), Aix Marseille Université, IRD 190, INSERM 1207, IHU Méditerranée Infection, Marseille, France
| | - Isabelle Leparc-Goffart
- National Reference Laboratory for Arboviruses, Institut de Recherche Biomédicale des Armées, Marseille, France
- Unité des Virus Emergents (UVE), Aix Marseille Université, IRD 190, INSERM 1207, IHU Méditerranée Infection, Marseille, France
| | - Christa Ann Gallagher
- Center for Conservation Medicine and Ecosystem Health, Ross University School of Veterinary Medicine, West Farm, Basseterre, St. Kitts and Nevis
| | - Amy Beierschmitt
- Department of Biomedical Sciences, Ross University School of Veterinary Medicine, West Farm, Basseterre, St. Kitts and Nevis
- Behavioral Science Foundation, Estridge Estate, Basseterre, St. Kitts and Nevis
| | - Tatiana Corey
- St. Kitts Biomedical Research Foundation, Bourryeau Estate, Christ Church Nichola Town, St. Kitts and Nevis
- Virscio, Inc, New Haven, CT USA
| | | | - Xavier de Lamballerie
- Unité des Virus Emergents (UVE), Aix Marseille Université, IRD 190, INSERM 1207, IHU Méditerranée Infection, Marseille, France
| | - Chengming Wang
- Department of Pathobiology, College of Veterinary Medicine, Auburn University, Auburn, AL USA
| | - Courtney Cuin Murdock
- Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA USA
- Odum School of Ecology, University of Georgia, Athens, GA USA
- Department of Entomology, College of Agriculture and Life Sciences, Cornell University, Ithaca, NY USA
- Center for Tropical Emerging and Global Diseases, University of Georgia, Athens, GA USA
- Center for Ecology of Infectious Diseases, Odum School of Ecology, University of Georgia, Athens, GA USA
- Center for Vaccines and Immunology, College of Veterinary Medicine, University of Georgia, Athens, GA USA
| | - Patrick John Kelly
- Department of Clinical Sciences, Ross University School of Veterinary Medicine, West Farm, Basseterre, St. Kitts and Nevis
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