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Pogue BW, Zhu TC, Ntziachristos V, Wilson BC, Paulsen KD, Gioux S, Nordstrom R, Pfefer TJ, Tromberg BJ, Wabnitz H, Yodh A, Chen Y, Litorja M. AAPM Task Group Report 311: Guidance for performance evaluation of fluorescence-guided surgery systems. Med Phys 2024; 51:740-771. [PMID: 38054538 DOI: 10.1002/mp.16849] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 11/02/2023] [Accepted: 11/06/2023] [Indexed: 12/07/2023] Open
Abstract
The last decade has seen a large growth in fluorescence-guided surgery (FGS) imaging and interventions. With the increasing number of clinical specialties implementing FGS, the range of systems with radically different physical designs, image processing approaches, and performance requirements is expanding. This variety of systems makes it nearly impossible to specify uniform performance goals, yet at the same time, utilization of different devices in new clinical procedures and trials indicates some need for common knowledge bases and a quality assessment paradigm to ensure that effective translation and use occurs. It is feasible to identify key fundamental image quality characteristics and corresponding objective test methods that should be determined such that there are consistent conventions across a variety of FGS devices. This report outlines test methods, tissue simulating phantoms and suggested guidelines, as well as personnel needs and professional knowledge bases that can be established. This report frames the issues with guidance and feedback from related societies and agencies having vested interest in the outcome, coming from an independent scientific group formed from academics and international federal agencies for the establishment of these professional guidelines.
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Affiliation(s)
- Brian W Pogue
- Department of Medical Physics, University of Wisconsin-Madison, Madison, Wisconsin, USA
- Thayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA
| | - Timothy C Zhu
- Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA
| | - Vasilis Ntziachristos
- Institute for Biological and Medical Imaging, Technical University of Munich, Helmholtz Zentrum Munich, Munich, Germany
| | - Brian C Wilson
- Department of Medical Biophysics, University of Toronto, University Health Network, Toronto, Ontario, Canada
| | - Keith D Paulsen
- Thayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA
| | - Sylvain Gioux
- Department of Biomedical Engineering, University of Strasbourg, Strasbourg, France
| | - Robert Nordstrom
- Cancer Imaging Program, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA
| | - T Joshua Pfefer
- Center for Devices and Radiological Health, US Food and Drug Administration, Silver Spring, Maryland, USA
| | - Bruce J Tromberg
- National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, Maryland, USA
| | | | - Arjun Yodh
- Department of Physics, University of Pennsylvania, Philadelphia, Pennsylvania, USA
| | - Yu Chen
- Department of Biomedical Engineering, University of Massachusetts Amherst, Amherst, Massachusetts, USA
| | - Maritoni Litorja
- Sensor Science Division, National Institute of Standards and Technology, Gaithersburg, Maryland, USA
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2
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Polyanskiy MN. Refractiveindex.info database of optical constants. Sci Data 2024; 11:94. [PMID: 38238330 PMCID: PMC10796781 DOI: 10.1038/s41597-023-02898-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 12/27/2023] [Indexed: 01/22/2024] Open
Abstract
We introduce the refractiveindex.info database, a comprehensive open-source repository containing optical constants for a wide array of materials, and describe in detail the underlying dataset. This collection, derived from a meticulous compilation of data sourced from peer-reviewed publications, manufacturers' datasheets, and authoritative texts, aims to advance research in optics and photonics. The data is stored using a YAML-based format, ensuring integrity, consistency, and ease of access. Each record is accompanied by detailed metadata, facilitating a comprehensive understanding and efficient utilization of the data. In this descriptor, we outline the data curation protocols and the file format used for data records, and briefly demonstrate how the data can be organized in a user-friendly fashion akin to the books in a traditional library.
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Affiliation(s)
- Mikhail N Polyanskiy
- Brookhaven National Laboratory, Accelerator Test Facility, Upton, NY, 11973, USA.
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3
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Yang M, Wei Y, Reineck P, Ebendorff-Heidepriem H, Li J, McLaughlin RA. Development of a glass-based imaging phantom to model the optical properties of human tissue. BIOMEDICAL OPTICS EXPRESS 2024; 15:346-359. [PMID: 38223187 PMCID: PMC10783914 DOI: 10.1364/boe.504774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Revised: 11/30/2023] [Accepted: 12/03/2023] [Indexed: 01/16/2024]
Abstract
The fabrication of a stable, reproducible optical imaging phantom is critical to the assessment and optimization of optical imaging systems. We demonstrate the use of an alternative material, glass, for the development of tissue-mimicking phantoms. The glass matrix was doped with nickel ions to approximate the absorption of hemoglobin. Scattering levels representative of human tissue were induced in the glass matrix through controlled crystallization at elevated temperatures. We show that this type of glass is a viable material for creating tissue-mimicking optical phantoms by providing controlled levels of scattering and absorption with excellent optical homogeneity, long-term stability and reproducibility.
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Affiliation(s)
- Mingze Yang
- School of Biomedicine, The University of Adelaide, Adelaide, SA, Australia
- Institute for Photonics and Advanced Sensing, The University of Adelaide, Adelaide, SA, Australia
| | - Yunle Wei
- Institute for Photonics and Advanced Sensing, The University of Adelaide, Adelaide, SA, Australia
- School of Physics, Chemistry and Earth Sciences, The University of Adelaide, Adelaide, SA, Australia
| | - Philipp Reineck
- School of Science, RMIT University, Melbourne, VIC, Australia
| | - Heike Ebendorff-Heidepriem
- Institute for Photonics and Advanced Sensing, The University of Adelaide, Adelaide, SA, Australia
- School of Physics, Chemistry and Earth Sciences, The University of Adelaide, Adelaide, SA, Australia
| | - Jiawen Li
- Institute for Photonics and Advanced Sensing, The University of Adelaide, Adelaide, SA, Australia
- School of Electrical and Mechanical Engineering, The University of Adelaide, Adelaide, SA, Australia
| | - Robert A. McLaughlin
- School of Biomedicine, The University of Adelaide, Adelaide, SA, Australia
- Institute for Photonics and Advanced Sensing, The University of Adelaide, Adelaide, SA, Australia
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4
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Gautam R, Ahmed R, Haugen E, Unal M, Fitzgerald S, Uppuganti S, Mahadevan-Jansen A, Nyman JS. Assessment of spatially offset Raman spectroscopy to detect differences in bone matrix quality. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 303:123240. [PMID: 37591015 PMCID: PMC10528408 DOI: 10.1016/j.saa.2023.123240] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2023] [Revised: 07/03/2023] [Accepted: 08/04/2023] [Indexed: 08/19/2023]
Abstract
Since spatially offset Raman spectroscopy (SORS) can acquire biochemical measurements of tissue quality through light scattering materials, we investigated the feasibility of this technique to acquire Raman bands related to the fracture resistance of bone. Designed to maximize signals at different offsets, a SORS probe was used to acquire spectra from cadaveric bone with and without skin-like tissue phantoms attenuating the light. Autoclaving the lateral side of femur mid-shafts from 5 female and 5 male donors at 100 °C and again at 120 °C reduced the yield stress of cortical beams subjected to three-point bending. It did not affect the volumetric bone mineral density or porosity. Without tissue phantoms, autoclaving affected more Raman characteristics of the organic matrix when determined by peak intensity ratios, but fewer matrix properties depended on the three offsets (5 mm, 6 mm, and 7 mm) when determined by band area ratios. The cut-off in the thickness of the tissue phantom layers was ∼4 mm for most properties, irrespective of offset. Matching trends when spectra were acquired without phantom layers between bone and the probe, ν1PO43-/Amide III and ν1PO43-/(proline + OH-proline) were higher and lower in the non-treated bone than in the autoclaved bone, respectively, when the thickness of tissue phantom layers was 4 mm. The layers, however, caused a loss of sensitivity to autoclaving-related changes in ν3CO3/ν1PO43- and crystallinity. Without advanced post-processing of Raman spectra, SORS acquisition through turbid layers can detect changes in Raman properties of bone that accompany a loss in bone strength.
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Affiliation(s)
- Rekha Gautam
- Department of Biomedical Engineering, Vanderbilt University, 5824 Stevenson Center, Nashville, TN 37232, USA; Biophotonics@Tyndall, IPIC, Tyndall National Institute, Cork, Ireland
| | - Rafay Ahmed
- Department of Orthopaedic Surgery, Vanderbilt University Medical Center, 1215 21st Ave. S., Suite 4200, Nashville, TN 37232, USA
| | - Ezekiel Haugen
- Department of Biomedical Engineering, Vanderbilt University, 5824 Stevenson Center, Nashville, TN 37232, USA
| | - Mustafa Unal
- Department of Bioengineering, Karamanoglu Mehmetbey University, Karaman, 70200, Turkey; Department of Biophysics, Faculty of Medicine, Karamanoglu Mehmetbey University, Karaman 70200, Turkey
| | - Sean Fitzgerald
- Department of Biomedical Engineering, Vanderbilt University, 5824 Stevenson Center, Nashville, TN 37232, USA
| | - Sasidhar Uppuganti
- Department of Orthopaedic Surgery, Vanderbilt University Medical Center, 1215 21st Ave. S., Suite 4200, Nashville, TN 37232, USA
| | - Anita Mahadevan-Jansen
- Department of Biomedical Engineering, Vanderbilt University, 5824 Stevenson Center, Nashville, TN 37232, USA; Vanderbilt Biophotonics Center, 410 24th Ave. S., Nashville, TN 37232, USA
| | - Jeffry S Nyman
- Department of Biomedical Engineering, Vanderbilt University, 5824 Stevenson Center, Nashville, TN 37232, USA; Department of Orthopaedic Surgery, Vanderbilt University Medical Center, 1215 21st Ave. S., Suite 4200, Nashville, TN 37232, USA; Department of Veterans Affairs, Tennessee Valley Healthcare System, 1310 24th Ave. S., Nashville, TN 37212, USA.
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5
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Fritzsche N, Ott F, Pink K, Kienle A. Focusing Coherent Light through Volume Scattering Phantoms via Wavefront Shaping. SENSORS (BASEL, SWITZERLAND) 2023; 23:8397. [PMID: 37896491 PMCID: PMC10611003 DOI: 10.3390/s23208397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 10/06/2023] [Accepted: 10/09/2023] [Indexed: 10/29/2023]
Abstract
Manipulating the wavefront of coherent light incident on scattering media to enhance the imaging depth, sensitivity, and resolution is a common technique in biomedical applications. Local phase variations cause changes in the interference and can be used to create a focus inside or behind a scattering medium. We use wavefront shaping (WFS) to force constructive interference at an arbitrary location. The amount of light transmitted into a given region strongly depends on the scattering and absorption characteristics. These are described by their respective coefficients μs and μa and the scattering phase function. Controlling the scattering and absorption coefficients, we study the behavior of wavefront shaping and the achievable intensity enhancement behind volume scattering media with well-defined optical properties. The phantoms designed in this publication are made of epoxy resin. Into these epoxy matrices, specific amounts of scattering and absorbing particles, such as titanium dioxide pigments and molecular dyes, are mixed. The mixture obtained is filled into 3D-printed frames of various thicknesses. After a precise fabrication procedure, an integrating sphere-based setup characterizes the phantoms experimentally. It detects the total hemispherical transmission and reflection. Further theoretical characterization is performed with a newly developed hybrid PN method. This method senses the flux of light into a particular angular range at the lower boundary of a slab. The calculations are performed without suffering from ringing and fulfill the exact boundary conditions there. A decoupled two-path detection system allows for fast optimization as well as sensitive detection. The measurements yield results that agree well with the theoretically expected behavior.
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Affiliation(s)
- Niklas Fritzsche
- Institut für Lasertechnologien in der Medizin und Meßtechnik an der Universität Ulm, D-89081 Ulm, Germany
- Faculty of Natural Sciences, Ulm University, D-89081 Ulm, Germany
| | - Felix Ott
- Institut für Lasertechnologien in der Medizin und Meßtechnik an der Universität Ulm, D-89081 Ulm, Germany
- Faculty of Natural Sciences, Ulm University, D-89081 Ulm, Germany
| | - Karsten Pink
- Institut für Lasertechnologien in der Medizin und Meßtechnik an der Universität Ulm, D-89081 Ulm, Germany
- Faculty of Natural Sciences, Ulm University, D-89081 Ulm, Germany
| | - Alwin Kienle
- Institut für Lasertechnologien in der Medizin und Meßtechnik an der Universität Ulm, D-89081 Ulm, Germany
- Faculty of Natural Sciences, Ulm University, D-89081 Ulm, Germany
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6
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Reiser M, Muller T, Flock K, Amft O, Breidenassel A. Comparison of non-pulsating reflective PPG signals in skin phantom, wearable device prototype, and Monte Carlo simulations. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2023; 2023:1-4. [PMID: 38083409 DOI: 10.1109/embc40787.2023.10340790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2023]
Abstract
We obtain and compare the non-pulsating part of reflective Photoplethysmogram (PPG) measurements in a porcine skin phantom and a wearable device prototype with Monte Carlo simulations and analyse the received signal. In particular, we investigate typical PPG wavelengths at 520, 637 and 940 nm and source-detector distances between 1.5 and 8.0 mm. We detail the phantom's optical parameters, the wearable device design, and the simulation setup. Monte Carlo simulations were using layer-based and voxel-based structures. Pattern of the detected photon weights showed comparable trends. PPG signal, differential pathlength factor (DPF), mean maximum penetration depth, and signal level showed dependencies on the source-detector distance d for all wavelengths. We demonstrate the signal dependence of emitter and detection angles, which is of interest for the development of wearables.
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7
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Haugen EJ, Throckmorton GA, Walter AB, Mahadevan-Jansen A, Baba JS. Measurement of rat and human tissue optical properties for improving the optical detection and visualization of peripheral nerves. BIOMEDICAL OPTICS EXPRESS 2023; 14:2839-2856. [PMID: 37342709 PMCID: PMC10278628 DOI: 10.1364/boe.488761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Revised: 04/29/2023] [Accepted: 04/30/2023] [Indexed: 06/23/2023]
Abstract
Peripheral nerve damage frequently occurs in challenging surgical cases resulting in high costs and morbidity. Various optical techniques have proven effective in detecting and visually enhancing nerves, demonstrating their translational potential for assisting in nerve-sparing medical procedures. However, there is limited data characterizing the optical properties of nerves in comparison to surrounding tissues, thus limiting the optimization of optical nerve detection systems. To address this gap, the absorption and scattering properties of rat and human nerve, muscle, fat, and tendon were determined from 352-2500 nm. The optical properties highlighted an ideal region in the shortwave infrared for detecting embedded nerves, which remains a significant challenge for optical approaches. A 1000-1700 nm hyperspectral diffuse reflectance imaging system was used to confirm these results and identify optimal wavelengths for nerve imaging contrast in an in vivo rat model. Optimal nerve visualization contrast was achieved using 1190/1100 nm ratiometric imaging and was sustained for nerves embedded under ≥600 µm of fat and muscle. Overall, the results provide valuable insights for optimizing the optical contrast of nerves, including those embedded in tissue, which could lead to improved surgical guidance and nerve-sparing outcomes.
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Affiliation(s)
- Ezekiel J. Haugen
- Vanderbilt Biophotonics Center, Vanderbilt University, Nashville, TN, USA
- Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA
| | - Graham A. Throckmorton
- Vanderbilt Biophotonics Center, Vanderbilt University, Nashville, TN, USA
- Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA
| | - Alec B. Walter
- Vanderbilt Biophotonics Center, Vanderbilt University, Nashville, TN, USA
- Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA
| | - Anita Mahadevan-Jansen
- Vanderbilt Biophotonics Center, Vanderbilt University, Nashville, TN, USA
- Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA
- Department of Surgery, Vanderbilt University Medical Center, Nashville, TN, USA
- Department of Otolaryngology, Vanderbilt University Medical Center, Nashville, TN, USA
- Department of Neurological Surgery, Vanderbilt University Medical Center, Nashville, TN, USA
| | - Justin S. Baba
- Vanderbilt Biophotonics Center, Vanderbilt University, Nashville, TN, USA
- Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA
- Yaya Scientific, LLC, Nashville, TN, USA
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8
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Glöckler F, Reitzle D, Gierke AM, Kienle A. Radiative transfer equation-based color prediction and color adjustment strategies. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2023; 40:549-559. [PMID: 37133031 DOI: 10.1364/josaa.477183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
This paper discusses different strategies for color prediction and matching. Although many groups use the two-flux model (i.e., the Kubelka-Munk theory or its extensions), we introduce a solution of the P N approximation for the radiative transfer equation (RTE) with modified Mark boundaries for the prediction of the transmittance and reflectance of turbid slabs with or without a glass layer on top. To demonstrate the capabilities of our solution, we have presented a way to prepare samples with different scatterers and absorbers where we can control and predict the optical properties and discussed three color-matching strategies: the approximation of the scattering and absorption coefficient, the adjustment of the reflectance, and the direct matching of the color valueL ∗ a ∗ b ∗.
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9
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Walter AB, Jansen ED. Development of a platform for broadband, spectra-fitted, tissue optical phantoms. JOURNAL OF BIOMEDICAL OPTICS 2023; 28:025001. [PMID: 36814953 PMCID: PMC9940728 DOI: 10.1117/1.jbo.28.2.025001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 01/24/2023] [Indexed: 06/18/2023]
Abstract
SIGNIFICANCE Current methods of producing optical phantoms are incapable of accurately capturing the wavelength-dependent properties of tissue critical for many optical modalities. AIM We aim to introduce a method of producing solid, inorganic phantoms whose wavelength-dependent optical properties can be matched to those of tissue over the wavelength range of 370 to 950 nm. APPROACH The concentration-dependent optical properties of 20 pigments were characterized and used to determine combinations that result in optimal fits compared to the target properties over the full spectrum. Phantoms matching the optical properties of muscle and nerve, the diffuse reflectance of pale and melanistic skin, and the chromophore concentrations of a computational skin model with varying oxygen saturation ( StO 2 ) were made with this method. RESULTS Both optical property phantoms were found to accurately mimic their respective tissues' absorption and scattering properties across the entire spectrum. The diffuse reflectance phantoms were able to closely approximate skin reflectance regardless of skin type. All three computational skin phantoms were found to have emulated chromophore concentrations close to the model, with an average percent error for the StO 2 of 4.31%. CONCLUSIONS This multipigment phantom platform represents a powerful tool for creating spectrally accurate tissue phantoms, which should increase the availability of standards for many optical techniques.
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Affiliation(s)
- Alec B. Walter
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
- Vanderbilt University, Biophotonics Center, Nashville, Tennessee, United States
| | - E. Duco Jansen
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
- Vanderbilt University, Biophotonics Center, Nashville, Tennessee, United States
- Vanderbilt University Medical Center, Department of Neurosurgery, Nashville, Tennessee, United States
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10
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O'Brien CM, Bishop KW, Zhang H, Xu X, Shmuylovich L, Conley E, Nwosu K, Duncan K, Mondal SB, Sudlow G, Achilefu S. Quantitative tumor depth determination using dual wavelength excitation fluorescence. BIOMEDICAL OPTICS EXPRESS 2022; 13:5628-5642. [PMID: 36733737 PMCID: PMC9872884 DOI: 10.1364/boe.468059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 08/10/2022] [Accepted: 08/16/2022] [Indexed: 06/07/2023]
Abstract
Quantifying solid tumor margins with fluorescence-guided surgery approaches is a challenge, particularly when using near infrared (NIR) wavelengths due to increased penetration depths. An NIR dual wavelength excitation fluorescence (DWEF) approach was developed that capitalizes on the wavelength-dependent attenuation of light in tissue to determine fluorophore depth. A portable dual wavelength excitation fluorescence imaging system was built and tested in parallel with an NIR tumor-targeting fluorophore in tissue mimicking phantoms, chicken tissue, and in vivo mouse models of breast cancer. The system showed high accuracy in all experiments. The low cost and simplicity of this approach make it ideal for clinical use.
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Affiliation(s)
- Christine M O'Brien
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
- Department of Biomedical Engineering, Washington University in St. Louis, 1 Brookings Drive St. Louis, MO 63130, USA
- These authors contributed equally to this work
| | - Kevin W Bishop
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
| | - Haini Zhang
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
- Department of Biomedical Engineering, Washington University in St. Louis, 1 Brookings Drive St. Louis, MO 63130, USA
| | - Xiao Xu
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
| | - Leo Shmuylovich
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
- Division of Dermatology, Department of Medicine, Washington University School of Medicine, 4960 Children's Place, St. Louis, MO 63110, USA
| | - Elizabeth Conley
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
| | - Karen Nwosu
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
| | - Kathleen Duncan
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
| | - Suman B Mondal
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
| | - Gail Sudlow
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
| | - Samuel Achilefu
- Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave., St. Louis, MO, 63110, USA
- Department of Biomedical Engineering, Washington University in St. Louis, 1 Brookings Drive St. Louis, MO 63130, USA
- Department of Medicine, Washington University School of Medicine, 4960 Children's Place, St. Louis, MO 63110, USA
- Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, 660 S. Euclid Ave., St. Louis, MO 63110, USA
- These authors contributed equally to this work
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11
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Lindner B, Foschum F, Kienle A. Spatially resolved reflectance from turbid media having a rough surface. Part I: simulations. APPLIED OPTICS 2022; 61:8361-8370. [PMID: 36256149 DOI: 10.1364/ao.469985] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Accepted: 09/01/2022] [Indexed: 06/16/2023]
Abstract
Determining the optical properties of turbid media with spatially resolved reflectance measurements is a well-known method in optical metrology. Typically, the surfaces of the investigated materials are assumed to be perfectly smooth. In most realistic cases, though, the surface has a rough topography and scatters light. In this study, we investigated the influence of the Cook-Torrance surface scattering model and the generalized Harvey-Shack surface scattering model on the spatially resolved reflectance based on Monte Carlo simulations. Besides analyzing the spatially resolved reflectance signal, we focused on the influence of surface scattering on the determination of the reduced scattering coefficients and absorption coefficients of turbid media. Both models led to significant errors in the determination of optical properties when roughness was not accounted for.
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12
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Lindner B, Foschum F, Kienle A. Spatially resolved reflectance from turbid media having a rough surface. Part II: experiments. APPLIED OPTICS 2022; 61:8123-8132. [PMID: 36255935 DOI: 10.1364/ao.469988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Accepted: 09/01/2022] [Indexed: 06/16/2023]
Abstract
Spatially resolved reflectance measurements are a standard tool for determining the absorption and scattering properties of turbid media such as biological tissue. However, in literature, it was shown that these measurements are subject to errors when a possible rough surface between the turbid medium and the surrounding is not accounted for. We evaluated these errors by comparing the spatially resolved reflectance measured on rough epoxy-based samples with Monte Carlo simulations using Lambertian surface scattering, the Cook-Torrance model, and the generalized Harvey-Shack model as surface scattering models. To this aim, goniometric measurements on the epoxy-based samples were compared to the angularly resolved reflectance of the three surface models to estimate the corresponding model parameters. Finally, the optical properties of the phantoms were determined using a Monte Carlo model with a smooth surface.
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13
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Hacker L, Wabnitz H, Pifferi A, Pfefer TJ, Pogue BW, Bohndiek SE. Criteria for the design of tissue-mimicking phantoms for the standardization of biophotonic instrumentation. Nat Biomed Eng 2022; 6:541-558. [PMID: 35624150 DOI: 10.1038/s41551-022-00890-6] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Accepted: 02/07/2022] [Indexed: 01/08/2023]
Abstract
A lack of accepted standards and standardized phantoms suitable for the technical validation of biophotonic instrumentation hinders the reliability and reproducibility of its experimental outputs. In this Perspective, we discuss general criteria for the design of tissue-mimicking biophotonic phantoms, and use these criteria and state-of-the-art developments to critically review the literature on phantom materials and on the fabrication of phantoms. By focusing on representative examples of standardization in diffuse optical imaging and spectroscopy, fluorescence-guided surgery and photoacoustic imaging, we identify unmet needs in the development of phantoms and a set of criteria (leveraging characterization, collaboration, communication and commitment) for the standardization of biophotonic instrumentation.
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Affiliation(s)
- Lina Hacker
- Department of Physics, University of Cambridge, Cambridge, UK.,Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK
| | - Heidrun Wabnitz
- Physikalisch-Technische Bundesanstalt (PTB), Berlin, Germany
| | | | | | - Brian W Pogue
- Thayer School of Engineering, Dartmouth, Hanover, NH, USA
| | - Sarah E Bohndiek
- Department of Physics, University of Cambridge, Cambridge, UK. .,Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK.
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14
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Lindner B, Foschum F, Kienle A. Influence of Lambertian surface scattering on the spatially resolved reflectance from turbid media: a computational study. APPLIED OPTICS 2022; 61:2775-2787. [PMID: 35471353 DOI: 10.1364/ao.454744] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 03/10/2022] [Indexed: 06/14/2023]
Abstract
The determination of the optical properties in turbid media plays an essential role in medical diagnostics and process control. The method of spatially resolved reflectance measurements is a frequently used tool to evaluate the reduced scattering coefficient as well as the absorption coefficient. In most cases a smooth interface is assumed between the medium under investigation and the surrounding medium. However, in reality, a rough surface is present at the interface, which alters the light interaction with the surface and volume of the turbid medium. Hence, the idea behind this paper was to investigate the influence of rough surfaces on the spatially resolved reflectance and thus on the determination of the optical properties of turbid media. Particularly, the influence of a Lambertian scattering surface on the result of Monte Carlo simulations of a spatially resolved reflectance setup is shown. In addition, we distinguish between the different interaction modes of surface scattering on the spatially resolved reflectance. There is a strong influence of roughness when the light enters and leaves the turbid medium. Furthermore, the simulations show that, especially for small reduced scattering coefficients and absorption coefficients, large errors in the determination of the optical properties are obtained.
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15
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Ruiz AJ, Garg S, Streeter SS, Giallorenzi MK, LaRochelle EPM, Samkoe KS, Pogue BW. 3D printing fluorescent material with tunable optical properties. Sci Rep 2021; 11:17135. [PMID: 34429467 PMCID: PMC8384872 DOI: 10.1038/s41598-021-96496-0] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Accepted: 08/11/2021] [Indexed: 02/06/2023] Open
Abstract
The 3D printing of fluorescent materials could help develop, validate, and translate imaging technologies, including systems for fluorescence-guided surgery. Despite advances in 3D printing techniques for optical targets, no comprehensive method has been demonstrated for the simultaneous incorporation of fluorophores and fine-tuning of absorption and scattering properties. Here, we introduce a photopolymer-based 3D printing method for manufacturing fluorescent material with tunable optical properties. The results demonstrate the ability to 3D print various individual fluorophores at reasonably high fluorescence yields, including IR-125, quantum dots, methylene blue, and rhodamine 590. Furthermore, tuning of the absorption and reduced scattering coefficients is demonstrated within the relevant mamalian soft tissue coefficient ranges of 0.005-0.05 mm-1 and 0.2-1.5 mm-1, respectively. Fabrication of fluorophore-doped biomimicking and complex geometric structures validated the ability to print feature sizes less than 200 μm. The presented methods and optical characterization techniques provide the foundation for the manufacturing of solid 3D printed fluorescent structures, with direct relevance to biomedical optics and the broad adoption of fast manufacturing methods in fluorescence imaging.
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Affiliation(s)
- Alberto J Ruiz
- Thayer School of Engineering, Dartmouth College, 14 Engineering Dr., Hanover, NH, 03755, USA.
- QUEL Imaging LLC, 85 N Main Streeet, White River Junction, VT, 05001, USA.
| | - Sadhya Garg
- Thayer School of Engineering, Dartmouth College, 14 Engineering Dr., Hanover, NH, 03755, USA
| | - Samuel S Streeter
- Thayer School of Engineering, Dartmouth College, 14 Engineering Dr., Hanover, NH, 03755, USA
| | - Mia K Giallorenzi
- Thayer School of Engineering, Dartmouth College, 14 Engineering Dr., Hanover, NH, 03755, USA
| | | | - Kimberley S Samkoe
- Thayer School of Engineering, Dartmouth College, 14 Engineering Dr., Hanover, NH, 03755, USA
| | - Brian W Pogue
- Thayer School of Engineering, Dartmouth College, 14 Engineering Dr., Hanover, NH, 03755, USA
- QUEL Imaging LLC, 85 N Main Streeet, White River Junction, VT, 05001, USA
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16
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Gorpas D, Ntziachristos V, Tian J. Principles and Practice of Intraoperative Fluorescence Imaging. Mol Imaging 2021. [DOI: 10.1016/b978-0-12-816386-3.00009-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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17
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Suprano A, Giordani T, Gianani I, Spagnolo N, Pinker K, Kupferman J, Arnon S, Klemm U, Gorpas D, Ntziachristos V, Sciarrino F. Propagation of structured light through tissue-mimicking phantoms. OPTICS EXPRESS 2020; 28:35427-35437. [PMID: 33379657 DOI: 10.1364/oe.402467] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Accepted: 10/03/2020] [Indexed: 06/12/2023]
Abstract
Optical interrogation of tissues is broadly considered in biomedical applications. Nevertheless, light scattering by tissue limits the resolution and accuracy achieved when investigating sub-surface tissue features. Light carrying optical angular momentum or complex polarization profiles, offers different propagation characteristics through scattering media compared to light with unstructured beam profiles. Here we discuss the behaviour of structured light scattered by tissue-mimicking phantoms. We study the spatial and the polarization profile of the scattered modes as a function of a range of optical parameters of the phantoms, with varying scattering and absorption coefficients and of different lengths. These results show the non-trivial trade-off between the advantages of structured light profiles and mode broadening, stimulating further investigations in this direction.
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Johannsmeier S, Wenzel J, Torres-Mapa ML, Junge S, Sasse P, Stockhausen JD, Ripken T, Heinemann D, Heisterkamp A. Light-cell interactions in depth-resolved optogenetics. BIOMEDICAL OPTICS EXPRESS 2020; 11:6536-6550. [PMID: 33282507 PMCID: PMC7687973 DOI: 10.1364/boe.404388] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2020] [Revised: 10/06/2020] [Accepted: 10/09/2020] [Indexed: 06/12/2023]
Abstract
Light as a tool in medical therapy and biological research has been studied extensively and its application is subject to continuous improvement. However, safe and efficient application of light-based methods in photomedicine or optogenetics requires knowledge about the optical properties of the target tissue as well as the response characteristics of the stimulated cells. Here, we used tissue phantoms and a heart-like light-sensitive cell line to investigate optogenetic stimulation through tissue layers. The input power necessary for successful stimulation could be described as a function of phantom thickness. A model of light transmission through the tissue phantoms gives insights into the expected stimulation efficiency. Cell-type specific effects are identified that result in deviations of the stimulation threshold from the modelled predictions. This study provides insights into the complex interplay between light, tissue and cells during deep-tissue optogenetics. It can serve as an orientation for safe implementation of light-based methods in vivo.
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Affiliation(s)
- Sonja Johannsmeier
- Industrial and Biomedical Optics Department, Laser Zentrum Hannover e.V., Hollerithallee 8, 30419 Hannover, Germany
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development, Stadtfelddamm 34, 30625 Hannover, Germany
| | - Johannes Wenzel
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development, Stadtfelddamm 34, 30625 Hannover, Germany
- Institute of Quantum Optics, Gottfried Wilhelm Leibniz Universität Hannover, Welfengarten 1, 30167 Hannover, Germany
| | - Maria L. Torres-Mapa
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development, Stadtfelddamm 34, 30625 Hannover, Germany
- Institute of Quantum Optics, Gottfried Wilhelm Leibniz Universität Hannover, Welfengarten 1, 30167 Hannover, Germany
| | - Sebastian Junge
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development, Stadtfelddamm 34, 30625 Hannover, Germany
- Institute of Quantum Optics, Gottfried Wilhelm Leibniz Universität Hannover, Welfengarten 1, 30167 Hannover, Germany
| | - Philipp Sasse
- Institute of Physiology I, Medical Faculty, University of Bonn, Nussallee 11, 53115 Bonn, Germany
| | - Joshua D. Stockhausen
- Institute of Physiology I, Medical Faculty, University of Bonn, Nussallee 11, 53115 Bonn, Germany
| | - Tammo Ripken
- Industrial and Biomedical Optics Department, Laser Zentrum Hannover e.V., Hollerithallee 8, 30419 Hannover, Germany
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development, Stadtfelddamm 34, 30625 Hannover, Germany
| | - Dag Heinemann
- Industrial and Biomedical Optics Department, Laser Zentrum Hannover e.V., Hollerithallee 8, 30419 Hannover, Germany
- Department of Phytophotonics, Institute of Horticultural Production Systems and Hannover Centre for Optical Technologies (HOT), Gottfried Wilhelm Leibniz University Hannover, 30419 Hannover, Germany
| | - Alexander Heisterkamp
- Industrial and Biomedical Optics Department, Laser Zentrum Hannover e.V., Hollerithallee 8, 30419 Hannover, Germany
- Lower Saxony Centre for Biomedical Engineering, Implant Research and Development, Stadtfelddamm 34, 30625 Hannover, Germany
- Institute of Quantum Optics, Gottfried Wilhelm Leibniz Universität Hannover, Welfengarten 1, 30167 Hannover, Germany
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Ruiz AJ, Wu M, LaRochelle EPM, Gorpas D, Ntziachristos V, Pfefer TJ, Pogue BW. Indocyanine green matching phantom for fluorescence-guided surgery imaging system characterization and performance assessment. JOURNAL OF BIOMEDICAL OPTICS 2020; 25:1-15. [PMID: 32441066 PMCID: PMC7240319 DOI: 10.1117/1.jbo.25.5.056003] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2020] [Accepted: 05/11/2020] [Indexed: 05/13/2023]
Abstract
SIGNIFICANCE Expanded use of fluorescence-guided surgery with devices approved for use with indocyanine green (ICG) has led to a range of commercial systems available. There is a compelling need to be able to independently characterize system performance and allow for cross-system comparisons. AIM The goal of this work is to expand on previous proposed fluorescence imaging standard designs to develop a long-term stable phantom that spectrally matches ICG characteristics and utilizes 3D printing technology for incorporating tissue-equivalent materials. APPROACH A batch of test targets was created to assess ICG concentration sensitivity in the 0.3- to 1000-nM range, tissue-equivalent depth sensitivity down to 6 mm, and spatial resolution with a USAF test chart. Comparisons were completed with a range of systems that have significantly different imaging capabilities and applications, including the Li-Cor® Odyssey, Li-Cor® Pearl, PerkinElmer® Solaris, and Stryker® Spy Elite. RESULTS Imaging of the ICG-matching phantoms with all four commercially available systems showed the ability to benchmark system performance and allow for cross-system comparisons. The fluorescence tests were able to assess differences in the detectable concentrations of ICG with sensitivity differences >10× for preclinical and clinical systems. Furthermore, the tests successfully assessed system differences in the depth-signal decay rate, as well as resolution performance and image artifacts. The manufacturing variations, photostability, and mechanical design of the tests showed promise in providing long-term stable standards for fluorescence imaging. CONCLUSIONS The presented ICG-matching phantom provides a major step toward standardizing performance characterization and cross-system comparisons for devices approved for use with ICG. The developed hybrid manufacturing platform can incorporate long-term stable fluorescing agents with 3D printed tissue-equivalent material. Further, long-term testing of the phantom and refinements to the manufacturing process are necessary for future implementation as a widely adopted fluorescence imaging standard.
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Affiliation(s)
- Alberto J. Ruiz
- Dartmouth College, Thayer School of Engineering, Hanover, New Hampshire, United States
- Address all correspondence to Alberto J. Ruiz, E-mail: ; Brian W. Pogue, E-mail:
| | - Mindy Wu
- Dartmouth College, Thayer School of Engineering, Hanover, New Hampshire, United States
| | | | - Dimitris Gorpas
- Institute of Biological and Medical Imaging, Helmholtz Zentrum München, Munich, Germany
- Technical University Munich, Helmholtz Zentrum Munich, Munich, Germany
| | - Vasilis Ntziachristos
- Institute of Biological and Medical Imaging, Helmholtz Zentrum München, Munich, Germany
- Technical University Munich, Helmholtz Zentrum Munich, Munich, Germany
| | - T. Joshua Pfefer
- U.S. Food and Drug Administration, Center for Devices and Radiological Health, Rockville, Maryland, United States
| | - Brian W. Pogue
- Dartmouth College, Thayer School of Engineering, Hanover, New Hampshire, United States
- Geisel School of Medicine, Department of Surgery, Hanover, New Hampshire, United States
- Address all correspondence to Alberto J. Ruiz, E-mail: ; Brian W. Pogue, E-mail:
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20
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Bergmann F, Foschum F, Zuber R, Kienle A. Precise determination of the optical properties of turbid media using an optimized integrating sphere and advanced Monte Carlo simulations. Part 2: experiments. APPLIED OPTICS 2020; 59:3216-3226. [PMID: 32400606 DOI: 10.1364/ao.385939] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Based on theoretical investigations of the light propagation within an integrating sphere, we developed an accurate method to determine the optical properties of scattering media using an integrating sphere-based setup. The method takes into account the exact sphere geometry as well as the different angular distributions of the reflected and transmitted light from the sample and the calibration standard. We tested our novelties successfully in theory with Monte Carlo simulations and in practice using a 3D printed and professionally coated integrating sphere. As a result, we were able to determine precisely the effective scattering coefficient, μs', and the absorption coefficient, μa, between 400 nm and 1500 nm in a range of μa=1e-3mm-1 to 10mm-1 and μs'=0.2mm-1 to 100mm-1. Usually, the accuracy was around 1% for μs' and around 3% for μa for turbid phantom media with an optical thickness τ=μs'd>1 and a transmittance signal >0.1%.
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21
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Gorpas D, Koch M, Anastasopoulou M, Bozhko D, Klemm U, Nieberler M, Ntziachristos V. Multi-Parametric Standardization of Fluorescence Imaging Systems Based on a Composite Phantom. IEEE Trans Biomed Eng 2019; 67:185-192. [PMID: 30990172 DOI: 10.1109/tbme.2019.2910733] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
OBJECTIVE Fluorescence molecular imaging (FMI) has emerged as a promising tool for surgical guidance in oncology, with one of the few remaining challenges being the ability to offer quality control and data referencing. This paper investigates the use of a novel composite phantom to correct and benchmark FMI systems. METHODS This paper extends on previous work by describing a phantom design that can provide a more complete assessment of FMI systems through quantification of dynamic range and determination of spatial illumination patterns for both reflectance and fluorescence imaging. Various performance metrics are combined into a robust and descriptive "system benchmarking score," enabling not only the comprehensive comparison of different systems, but also for the first time, correction of the acquired data. RESULTS We show that systems developed for targeted fluorescence imaging can achieve benchmarking scores of up to 70%, while clinically available systems optimized for indocyanine green are limited to 50%, mostly due to greater leakage of ambient and excitation illumination and lower resolution. The image uniformity can also be approximated and employed for image flat-fielding, an important milestone toward data referencing. In addition, we demonstrate composite phantom use in assessing the performance of a surgical microscope and of a raster-scan imaging system. CONCLUSION Our results suggest that the new phantom has the potential to support high-fidelity FMI through benchmarking and image correction. SIGNIFICANCE Standardization of the FMI is a necessary process for establishing good imaging practices in clinical environments and for enabling high-fidelity imaging across patients and multi-center imaging studies.
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22
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Nothelfer S, Bergmann F, Liemert A, Reitzle D, Kienle A. Spatial frequency domain imaging using an analytical model for separation of surface and volume scattering. JOURNAL OF BIOMEDICAL OPTICS 2018; 24:1-10. [PMID: 30218505 PMCID: PMC6995876 DOI: 10.1117/1.jbo.24.7.071604] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2018] [Accepted: 08/10/2018] [Indexed: 05/06/2023]
Abstract
A method to correct for surface scattering in spatial frequency domain imaging (SFDI) is presented. The use of a modified analytical solution of the radiative transfer equation allows calculation of the reflectance and the phase of a rough semi-infinite geometry so that both spatial frequency domain reflectance and phase can be applied for precise retrieval of the bulk optical properties and the surface scattering. For validation of the method, phantoms with different surface roughness were produced. Contrarily, with the modified theory, it was possible to dramatically reduce systematic errors due to surface scattering. The evaluation of these measurements with the state-of-the-art theory and measuring modality, i.e., using crossed linear polarizers, reveals large errors in the determined optical properties, depending on the surface roughness, of up to ≈100 % . These results were confirmed with SFDI measurements on a phantom that has a structured rough surface.
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Affiliation(s)
- Steffen Nothelfer
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
- Address all correspondence to: Steffen Nothelfer, E-mail:
| | - Florian Bergmann
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - André Liemert
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - Dominik Reitzle
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - Alwin Kienle
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
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23
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Häffner A, Krauter P, Kienle A. Density-dependent determination of scattering properties of pharmaceutical tablets using coherent backscattering spectroscopy. OPTICS EXPRESS 2018; 26:19964-19971. [PMID: 30119315 DOI: 10.1364/oe.26.019964] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2018] [Accepted: 06/28/2018] [Indexed: 06/08/2023]
Abstract
We report on measurements of coherent backscattering from pharmaceutical tablets. Experimental data is analysed using the radiative transfer equation with focus on the determination of the reduced scattering coefficient μs'. The results show a good agreement with μs' determined by measuring the spatially resolved reflectance, whereat we demonstrate advantages of the coherent backscattering measurements. Furthermore, we present a correlation between μs' and tablet compression force, respectively density.
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24
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Stocker S, Foschum F, Kienle A. Spatially Resolved Lateral Transmission Measurements to Characterize Changes in the Scattering Coefficient and the Anisotropy Factor. APPLIED SPECTROSCOPY 2018; 72:757-764. [PMID: 29464961 DOI: 10.1177/0003702818757520] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
A new setup is described to characterize the scattering coefficient and the scattering phase function of liquid media. The setup utilizes the basic idea of a spatially resolved reflectance measurement combined with a sophisticated illumination geometry. The sample is illuminated parallel and close to the interface of the sample and a glass window to get information from single scattered and multiple scattered light. By illuminating the sample with a fiber orientated with the axis parallel to the glass surface, small distances to the source can be examined unimpeded by the illumination beam. The derived information is, for example, not only sensitive to the concentration of the scatterers but also to the size of the scattering particles. We present the setup including the theory to describe the light propagation in the whole configuration using Monte Carlo simulations. The validation has been done with polystyrene microsphere dispersions with different scattering coefficients. As application for the developed setup, we show measurements of different milk samples which vary in concentration of fat, protein, and in fat droplet size during homogenization process. By measuring milk, we show the ability of the sensor to determine information about the scattering phase function without diluting the sample. For sensors in the dairy industry, a measurement with no pre-processing and no diluting of the sample is worthwhile, because this can be used to determine the fat and protein concentration on-line.
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Affiliation(s)
- Sabrina Stocker
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - Florian Foschum
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - Alwin Kienle
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
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25
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Krauter P, Zoller C, Kienle A. Double anisotropic coherent backscattering of light. OPTICS LETTERS 2018; 43:1702-1705. [PMID: 29652344 DOI: 10.1364/ol.43.001702] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2018] [Accepted: 03/06/2018] [Indexed: 06/08/2023]
Abstract
A double anisotropic coherent backscattering cone was found. In contrast to the (single) anisotropic coherent backscattering, which was observed in liquid crystals, here, the long axis of the elongated structures changes its orientation with angular distance. We compared our results with the two-dimensional Fourier transform of spatially resolved reflectance measurements and found good agreement, which is predicted by the reciprocity thesis. Furthermore, a Monte Carlo model was applied to reproduce successfully the results of the experiment, whereas the double anisotropy is not predicted by diffusion models.
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26
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Hassaninia I, Bostanabad R, Chen W, Mohseni H. Characterization of the Optical Properties of Turbid Media by Supervised Learning of Scattering Patterns. Sci Rep 2017; 7:15259. [PMID: 29127385 PMCID: PMC5681626 DOI: 10.1038/s41598-017-15601-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Accepted: 10/30/2017] [Indexed: 11/09/2022] Open
Abstract
Fabricated tissue phantoms are instrumental in optical in-vitro investigations concerning cancer diagnosis, therapeutic applications, and drug efficacy tests. We present a simple non-invasive computational technique that, when coupled with experiments, has the potential for characterization of a wide range of biological tissues. The fundamental idea of our approach is to find a supervised learner that links the scattering pattern of a turbid sample to its thickness and scattering parameters. Once found, this supervised learner is employed in an inverse optimization problem for estimating the scattering parameters of a sample given its thickness and scattering pattern. Multi-response Gaussian processes are used for the supervised learning task and a simple setup is introduced to obtain the scattering pattern of a tissue sample. To increase the predictive power of the supervised learner, the scattering patterns are filtered, enriched by a regressor, and finally characterized with two parameters, namely, transmitted power and scaled Gaussian width. We computationally illustrate that our approach achieves errors of roughly 5% in predicting the scattering properties of many biological tissues. Our method has the potential to facilitate the characterization of tissues and fabrication of phantoms used for diagnostic and therapeutic purposes over a wide range of optical spectrum.
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Affiliation(s)
- Iman Hassaninia
- Department of Electrical Engineering and Computer Science, Northwestern University, Evanston, IL, 60208, USA
| | - Ramin Bostanabad
- Department of Mechanical Engineering, Northwestern University, Evanston, IL, 60208, USA
| | - Wei Chen
- Department of Mechanical Engineering, Northwestern University, Evanston, IL, 60208, USA
| | - Hooman Mohseni
- Department of Electrical Engineering and Computer Science, Northwestern University, Evanston, IL, 60208, USA.
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27
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Stocker S, Foschum F, Krauter P, Bergmann F, Hohmann A, Scalfi Happ C, Kienle A. Broadband Optical Properties of Milk. APPLIED SPECTROSCOPY 2017; 71:951-962. [PMID: 27770046 DOI: 10.1177/0003702816666289] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Dairy products play an important role in our daily nutrition. As a turbid scattering medium with different kinds of particles and droplets, each alteration of these components changes the scattering properties of milk. The goal of this work is the determination of the amount of main scattering components, the fat droplets and the casein micelles, by understanding the light propagation in homogenized milk and in raw milk. To provide the absolute impact of these milk components, the geometrical and optical properties such as the size distribution and the refractive index (RI) of the components have to be examined. We determined the reduced scattering coefficient [Formula: see text] and the absorption coefficient [Formula: see text] from integrating sphere measurements. By use of a collimated transmission setup, the scattering coefficient [Formula: see text] was measured. Size measurements were performed to validate the influence of the fat droplet size on the results of the scattering properties; also, the RI of both components was determined by the said coefficients. These results were used to determine the absolute impact of the milk components on the scattering behavior. By fitting Mie theory calculations on scattering spectra [Formula: see text] and [Formula: see text] from different raw milk samples, it was possible to get reliable values for the concentrations of fat and casein and for the size of the fat droplets. By destroying the casein micelles, it was possible to separate the influence of the different scattering components on scattering behavior.
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Affiliation(s)
- Sabrina Stocker
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - Florian Foschum
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - Philipp Krauter
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - Florian Bergmann
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | - Ansgar Hohmann
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
| | | | - Alwin Kienle
- Institut für Lasertechnologien in der Medizin und Meßtechnik, Ulm, Germany
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28
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Naglič P, Pernuš F, Likar B, Bürmen M. Lookup table-based sampling of the phase function for Monte Carlo simulations of light propagation in turbid media. BIOMEDICAL OPTICS EXPRESS 2017; 8:1895-1910. [PMID: 28663872 PMCID: PMC5480587 DOI: 10.1364/boe.8.001895] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2016] [Revised: 01/25/2017] [Accepted: 02/15/2017] [Indexed: 05/28/2023]
Abstract
Analytical expressions for sampling the scattering angle from a phase function in Monte Carlo simulations of light propagation are available only for a limited number of phase functions. Consequently, numerical sampling methods based on tabulated values are often required instead. By using Monte Carlo simulated reflectance, we compare two existing and propose an improved numerical sampling method and show that both the number of the tabulated values and the numerical sampling method significantly influence the accuracy of the simulated reflectance. The provided results and guidelines should serve as a good starting point for conducting computationally efficient Monte Carlo simulations with numerical phase function sampling.
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29
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Schindler J, Schau P, Brodhag N, Frenner K, Osten W. Retrieving the axial position of fluorescent light emitting spots by shearing interferometry. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:125009. [PMID: 28030743 DOI: 10.1117/1.jbo.21.12.125009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2016] [Accepted: 12/07/2016] [Indexed: 06/06/2023]
Abstract
A method for the depth-resolved detection of fluorescent radiation based on imaging of an interference pattern of two intersecting beams and shearing interferometry is presented. The illumination setup provides the local addressing of the excitation of fluorescence and a coarse confinement of the excitation volume in axial and lateral directions. The reconstruction of the depth relies on the measurement of the phase of the fluorescent wave fronts. Their curvature is directly related to the distance of a source to the focus of the imaging system. Access to the phase information is enabled by a lateral shearing interferometer based on a Michelson setup. This allows the evaluation of interference signals even for spatially and temporally incoherent light such as emitted by fluorophors. An analytical signal model is presented and the relations for obtaining the depth information are derived. Measurements of reference samples with different concentrations and spatial distributions of fluorophors and scatterers prove the experimental feasibility of the method. In a setup optimized for flexibility and operating in the visible range, sufficiently large interference signals are recorded for scatterers placed in depths in the range of hundred micrometers below the surface in a material with scattering properties comparable to dental enamel.
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Affiliation(s)
- Johannes Schindler
- University of Stuttgart, Institut für Technische Optik, Pfaffenwaldring 9, 70569 Stuttgart, Germany
| | - Philipp Schau
- University of Stuttgart, Institut für Technische Optik, Pfaffenwaldring 9, 70569 Stuttgart, Germany
| | - Nicole Brodhag
- University of Stuttgart, Institut für Technische Optik, Pfaffenwaldring 9, 70569 Stuttgart, Germany
| | | | - Wolfgang Osten
- University of Stuttgart, Institut für Technische Optik, Pfaffenwaldring 9, 70569 Stuttgart, Germany
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Naglic P, Pernuš F, Likar B, Bürmen M. Estimation of optical properties by spatially resolved reflectance spectroscopy in the subdiffusive regime. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:95003. [PMID: 27653934 DOI: 10.1117/1.jbo.21.9.095003] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2016] [Accepted: 08/23/2016] [Indexed: 05/20/2023]
Abstract
We propose and objectively evaluate an inverse Monte Carlo model for estimation of absorption and reduced scattering coefficients and similarity parameter ? from spatially resolved reflectance (SRR) profiles in the subdiffusive regime. The similarity parameter ? carries additional information on the phase function that governs the angular properties of scattering in turbid media. The SRR profiles at five source-detector separations were acquired with an optical fiber probe. The inverse Monte Carlo model was based on a cost function that enabled robust estimation of optical properties from a few SRR measurements without a priori knowledge about spectral dependencies of the optical properties. Validation of the inverse Monte Carlo model was performed on synthetic datasets and measured SRR profiles of turbid phantoms comprising molecular dye and polystyrene microspheres. We observed that the additional similarity parameter ? substantially reduced the reflectance variability arising from the phase function properties and significantly improved the accuracy of the inverse Monte Carlo model. However, the observed improvement of the extended inverse Monte Carlo model was limited to reduced scattering coefficients exceeding ?15??cm?1, where the relative root-mean-square errors of the estimated optical properties were well within 10%.
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Affiliation(s)
- Peter Naglic
- University of Ljubljana, Laboratory of Imaging Technologies, Faculty of Electrical Engineering, Tržaška cesta 25, SI-1000, Ljubljana, Slovenia
| | - Franjo Pernuš
- University of Ljubljana, Laboratory of Imaging Technologies, Faculty of Electrical Engineering, Tržaška cesta 25, SI-1000, Ljubljana, Slovenia
| | - Boštjan Likar
- University of Ljubljana, Laboratory of Imaging Technologies, Faculty of Electrical Engineering, Tržaška cesta 25, SI-1000, Ljubljana, Slovenia
| | - Miran Bürmen
- University of Ljubljana, Laboratory of Imaging Technologies, Faculty of Electrical Engineering, Tržaška cesta 25, SI-1000, Ljubljana, Slovenia
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31
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Anastasopoulou M, Koch M, Gorpas D, Karlas A, Klemm U, Garcia-Allende PB, Ntziachristos V. Comprehensive phantom for interventional fluorescence molecular imaging. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:091309. [PMID: 27304578 DOI: 10.1117/1.jbo.21.9.091309] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2016] [Accepted: 05/23/2016] [Indexed: 05/03/2023]
Abstract
Fluorescence imaging has been considered for over a half-century as a modality that could assist surgical guidance and visualization. The administration of fluorescent molecules with sensitivity to disease biomarkers and their imaging using a fluorescence camera can outline pathophysiological parameters of tissue invisible to the human eye during operation. The advent of fluorescent agents that target specific cellular responses and molecular pathways of disease has facilitated the intraoperative identification of cancer with improved sensitivity and specificity over nonspecific fluorescent dyes that only outline the vascular system and enhanced permeability effects. With these new abilities come unique requirements for developing phantoms to calibrate imaging systems and algorithms. We briefly review herein progress with fluorescence phantoms employed to validate fluorescence imaging systems and results. We identify current limitations and discuss the level of phantom complexity that may be required for developing a universal strategy for fluorescence imaging calibration. Finally, we present a phantom design that could be used as a tool for interlaboratory system performance evaluation.
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Affiliation(s)
- Maria Anastasopoulou
- Helmholtz Zentrum München, Institute for Biological and Medical Imaging, Ingolstädter Landstraße 1, Neuherberg D-85764 GermanybTechnical University Munich, Chair for Biological Imaging, Arcisstraße 21, Munich D-80333, Germany
| | - Maximilian Koch
- Helmholtz Zentrum München, Institute for Biological and Medical Imaging, Ingolstädter Landstraße 1, Neuherberg D-85764 GermanybTechnical University Munich, Chair for Biological Imaging, Arcisstraße 21, Munich D-80333, Germany
| | - Dimitris Gorpas
- Helmholtz Zentrum München, Institute for Biological and Medical Imaging, Ingolstädter Landstraße 1, Neuherberg D-85764 GermanybTechnical University Munich, Chair for Biological Imaging, Arcisstraße 21, Munich D-80333, Germany
| | - Angelos Karlas
- Helmholtz Zentrum München, Institute for Biological and Medical Imaging, Ingolstädter Landstraße 1, Neuherberg D-85764 GermanybTechnical University Munich, Chair for Biological Imaging, Arcisstraße 21, Munich D-80333, Germany
| | - Uwe Klemm
- Helmholtz Zentrum München, Institute for Biological and Medical Imaging, Ingolstädter Landstraße 1, Neuherberg D-85764 Germany
| | - Pilar Beatriz Garcia-Allende
- Helmholtz Zentrum München, Institute for Biological and Medical Imaging, Ingolstädter Landstraße 1, Neuherberg D-85764 GermanybTechnical University Munich, Chair for Biological Imaging, Arcisstraße 21, Munich D-80333, Germany
| | - Vasilis Ntziachristos
- Helmholtz Zentrum München, Institute for Biological and Medical Imaging, Ingolstädter Landstraße 1, Neuherberg D-85764 GermanybTechnical University Munich, Chair for Biological Imaging, Arcisstraße 21, Munich D-80333, Germany
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Saager RB, Quach A, Rowland RA, Baldado ML, Durkin AJ. Low-cost tissue simulating phantoms with adjustable wavelength-dependent scattering properties in the visible and infrared ranges. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:67001. [PMID: 27292135 PMCID: PMC4904063 DOI: 10.1117/1.jbo.21.6.067001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2016] [Accepted: 05/23/2016] [Indexed: 05/09/2023]
Abstract
We present a method for low-cost fabrication of polydimethylsiloxane (PDMS) tissue simulating phantoms with tunable scattering spectra, spanning visible, and near-infrared regimes. These phantoms use optical polishing agents (aluminum oxide powders) at various grit sizes to approximate in vivo tissue scattering particles across multiple size distributions (range: 17 to 3 μm). This class of tunable scattering phantoms is used to mimic distinct changes in wavelength-dependent scattering properties observed in tissue pathologies such as partial thickness burns. Described by a power-law dependence on wavelength, the scattering magnitude of these phantoms scale linearly with particle concentration over a physiologic range [μs′=(0.5 to 2.0 mm−1)] whereas the scattering spectra, specific to each particle size distribution, correlate to distinct exponential coefficients (range: 0.007 to 0.32). Aluminum oxide powders used in this investigation did not detectably contribute to the absorption properties of these phantoms. The optical properties of these phantoms are verified through inverse adding-doubling methods and the tolerances of this fabrication method are discussed.
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Affiliation(s)
- Rolf B. Saager
- University of California, Irvine, 1002 Health Sciences Road, Irvine, California 92612, United States
- Address all correspondence to: Rolf B. Saager, E-mail:
| | - Alan Quach
- University of California, Irvine, 1002 Health Sciences Road, Irvine, California 92612, United States
| | - Rebecca A. Rowland
- University of California, Irvine, 1002 Health Sciences Road, Irvine, California 92612, United States
| | - Melissa L. Baldado
- University of California, Irvine, 1002 Health Sciences Road, Irvine, California 92612, United States
| | - Anthony J. Durkin
- University of California, Irvine, 1002 Health Sciences Road, Irvine, California 92612, United States
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Bodenschatz N, Krauter P, Nothelfer S, Foschum F, Bergmann F, Liemert A, Kienle A. Detecting structural information of scatterers using spatial frequency domain imaging. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:116006. [PMID: 26590206 DOI: 10.1117/1.jbo.20.11.116006] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2015] [Accepted: 10/16/2015] [Indexed: 05/23/2023]
Abstract
We demonstrate optical phantom experiments on the phase function parameter γ using spatial frequency domain imaging. The incorporation of two different types of scattering particles allows for control of the optical phantoms’ microscopic scattering properties. By laterally structuring areas with either TiO2 or Al2O3 scattering particles, we were able to obtain almost pure subdiffusive scattering contrast in a single optical phantom. Optical parameter mapping was then achieved using an analytical radiative transfer model revealing the microscopic structural contrast on a macroscopic field of view. As part of our study, we explain several correction and referencing techniques for high spatial frequency analysis and experimentally study the sampling depth of the subdiffusive parameter γ.
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