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Allen C, Yeo AU, Hardcastle N, Franich RD. Evaluating synthetic computed tomography images for adaptive radiotherapy decision making in head and neck cancer. Phys Imaging Radiat Oncol 2023; 27:100478. [PMID: 37655123 PMCID: PMC10465931 DOI: 10.1016/j.phro.2023.100478] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2022] [Revised: 07/19/2023] [Accepted: 07/22/2023] [Indexed: 09/02/2023] Open
Abstract
Background and purpose Adaptive radiotherapy (ART) decision-making benefits from dosimetric information to supplement image inspection when assessing the significance of anatomical changes. This study evaluated a dosimetry-based clinical decision workflow for ART utilizing deformable registration of the original planning computed tomography (CT) image to the daily Cone Beam CT (CBCT) to replace the need for a replan CT for dose estimation. Materials and methods We used 12 retrospective Head & Neck patient cases having a ground truth - a replan CT (rCT) in response to anatomical changes apparent in the daily CBCT - to evaluate the accuracy of dosimetric assessment conducted on synthetic CTs (sCT) generated by deforming the original planning CT Hounsfield Units to the daily CBCT anatomy.The original plan was applied to the sCT and dosimetric accuracy of the sCT was assessed by analyzing plan objectives for targets and organs-at-risk compared to calculations on the ground-truth rCT. Three commercial DIR algorithms were compared. Results For the best-performing algorithms, the majority of dose metrics calculated on the sCTs differed by less than 4 Gy (5.7% of 70 Gy prescription dose). An uncertainty of ±2.5 Gy (3.6% of 70 Gy prescription) is recommended as a conservative tolerance when evaluating dose metrics on sCTs for head and neck. Conclusions Synthetic CTs present a valuable addition to the adaptive radiotherapy workflow, and synthetic CT dose estimates can be effectively used in addition to the current practice of visually inspecting the overlay of the planning CT and CBCT to assess the significance of anatomical change.
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Affiliation(s)
- Caitlin Allen
- Physical Sciences, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia
- School of Science, RMIT University, Melbourne, Victoria, Australia
| | - Adam U. Yeo
- Physical Sciences, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia
- School of Science, RMIT University, Melbourne, Victoria, Australia
| | - Nicholas Hardcastle
- Physical Sciences, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia
- Centre for Medical Radiation Physics, University of Wollongong, NSW, Australia
| | - Rick D. Franich
- Physical Sciences, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia
- School of Science, RMIT University, Melbourne, Victoria, Australia
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Garcia Hernandez A, Fau P, Wojak J, Mailleux H, Benkreira M, Rapacchi S, Adel M. Synthetic computed tomography generation for abdominal adaptive radiotherapy using low-field magnetic resonance imaging. Phys Imaging Radiat Oncol 2023; 25:100425. [PMID: 36896334 PMCID: PMC9988674 DOI: 10.1016/j.phro.2023.100425] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Revised: 02/12/2023] [Accepted: 02/17/2023] [Indexed: 02/24/2023] Open
Abstract
Background and Purpose Magnetic Resonance guided Radiotherapy (MRgRT) still needs the acquisition of Computed Tomography (CT) images and co-registration between CT and Magnetic Resonance Imaging (MRI). The generation of synthetic CT (sCT) images from the MR data can overcome this limitation. In this study we aim to propose a Deep Learning (DL) based approach for sCT image generation for abdominal Radiotherapy using low field MR images. Materials and methods CT and MR images were collected from 76 patients treated on abdominal sites. U-Net and conditional Generative Adversarial Network (cGAN) architectures were used to generate sCT images. Additionally, sCT images composed of only six bulk densities were generated with the aim of having a Simplified sCT.Radiotherapy plans calculated using the generated images were compared to the original plan in terms of gamma pass rate and Dose Volume Histogram (DVH) parameters. Results sCT images were generated in 2 s and 2.5 s with U-Net and cGAN architectures respectively.Gamma pass rates for 2%/2mm and 3%/3mm criteria were 91% and 95% respectively. Dose differences within 1% for DVH parameters on the target volume and organs at risk were obtained. Conclusion U-Net and cGAN architectures are able to generate abdominal sCT images fast and accurately from low field MRI.
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Affiliation(s)
- Armando Garcia Hernandez
- Aix Marseille Univ, CNRS, Centrale Marseille, Institut Fresnel, Marseille, France
- Corresponding author.
| | - Pierre Fau
- Institut Paoli-Calmettes, Bouches du Rhône, Marseille, France
| | - Julien Wojak
- Aix Marseille Univ, CNRS, Centrale Marseille, Institut Fresnel, Marseille, France
| | - Hugues Mailleux
- Institut Paoli-Calmettes, Bouches du Rhône, Marseille, France
| | | | | | - Mouloud Adel
- Aix Marseille Univ, CNRS, Centrale Marseille, Institut Fresnel, Marseille, France
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Kim SW, Shin HJ, Hwang JH, Shin JS, Park SK, Kim JY, Kim KJ, Kay CS, Kang YN. Image similarity evaluation of the bulk-density-assigned synthetic CT derived from MRI of intracranial regions for radiation treatment. PLoS One 2017; 12:e0185082. [PMID: 28926610 PMCID: PMC5605009 DOI: 10.1371/journal.pone.0185082] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2017] [Accepted: 09/06/2017] [Indexed: 11/30/2022] Open
Abstract
Objective Various methods for radiation-dose calculation have been investigated over previous decades, focusing on the use of magnetic resonance imaging (MRI) only. The bulk-density-assignment method based on manual segmentation has exhibited promising results compared to dose-calculation with computed tomography (CT). However, this method cannot be easily implemented in clinical practice due to its time-consuming nature. Therefore, we investigated an automatic anatomy segmentation method with the intention of providing the proper methodology to evaluate synthetic CT images for a radiation-dose calculation based on MR images. Methods CT images of 20 brain cancer patients were selected, and their MR images including T1-weighted, T2-weighted, and PETRA were retrospectively collected. Eight anatomies of the patients, such as the body, air, eyeball, lens, cavity, ventricle, brainstem, and bone, were segmented for bulk-density-assigned CT image (BCT) generation. In addition, water-equivalent CT images (WCT) with only two anatomies—body and air—were generated for a comparison with BCT. Histogram comparison and gamma analysis were performed by comparison with the original CT images, after the evaluation of automatic segmentation performance with the dice similarity coefficient (DSC), false negative dice (FND) coefficient, and false positive dice (FPD) coefficient. Results The highest DSC value was 99.34 for air segmentation, and the lowest DSC value was 73.50 for bone segmentation. For lens segmentation, relatively high FND and FPD values were measured. The cavity and bone were measured as over-segmented anatomies having higher FPD values than FND. The measured histogram comparison results of BCT were better than those of WCT in all cases. In gamma analysis, the averaged improvement of BCT compared to WCT was measured. All the measured results of BCT were better than those of WCT. Therefore, the results of this study show that the introduced methods, such as histogram comparison and gamma analysis, are valid for the evaluation of the synthetic CT generation from MR images. Conclusions The image similarity results showed that BCT has superior results compared to WCT for all measurements performed in this study. Consequently, more accurate radiation treatment for the intracranial regions can be expected when the proper image similarity evaluation introduced in this study is performed.
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Affiliation(s)
- Shin-Wook Kim
- Department of Radiation Oncology, Incheon St. Mary’s Hospital, College of Medicine, The Catholic University of Korea, Seoul, Korea
| | - Hun-Joo Shin
- Department of Radiation Oncology, Incheon St. Mary’s Hospital, College of Medicine, The Catholic University of Korea, Seoul, Korea
| | - Jin-Ho Hwang
- Department of Biomedical Engineering, College of Medicine, The Catholic University of Korea, Seoul, Korea
| | - Jin-Sol Shin
- Department of Biomedical Engineering, College of Medicine, The Catholic University of Korea, Seoul, Korea
| | - Sung-Kwang Park
- Department of Radiation Oncology, Busan Paik Hospital, Inje University, Busan, Korea
| | - Jin-Young Kim
- Department of Radiation Oncology, Haeundae Paik Hospital, Inje University, Busan, Korea
| | - Ki-Jun Kim
- Department of Radiology, Incheon St. Mary’s Hospital, College of Medicine, The Catholic University of Korea, Seoul, Korea
| | - Chul-Seung Kay
- Department of Radiation Oncology, Incheon St. Mary’s Hospital, College of Medicine, The Catholic University of Korea, Seoul, Korea
| | - Young-Nam Kang
- Department of Radiation Oncology, Seoul St. Mary’s Hospital, College of Medicine, The Catholic University of Korea, Seoul, Korea
- * E-mail:
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Wachowicz K, De Zanche N, Yip E, Volotovskyy V, Fallone BG. CNR considerations for rapid real-time MRI tumor tracking in radiotherapy hybrid devices: Effects of B0 field strength. Med Phys 2017; 43:4903. [PMID: 27487907 DOI: 10.1118/1.4959542] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
PURPOSE This work examines the subject of contrast-to-noise ratio (CNR), specifically between tumor and tissue background, and its dependence on the MRI field strength, B0. This examination is motivated by the recent interest and developments in MRI/radiotherapy hybrids where real-time imaging can be used to guide treatment beams. The ability to distinguish a tumor from background tissue is of primary importance in this field, and this work seeks to elucidate the complex relationship between the CNR and B0 that is too often assumed to be purely linear. METHODS Experimentally based models of B0-dependant relaxation for various tumor and normal tissues from the literature were used in conjunction with signal equations for MR sequences suitable for rapid real-time imaging to develop field-dependent predictions for CNR. These CNR models were developed for liver, lung, breast, glioma, and kidney tumors for spoiled gradient-echo, balanced steady-state free precession (bSSFP), and single-shot half-Fourier fast spin echo sequences. RESULTS Due to the pattern in which the relaxation properties of tissues are found to vary over B0 field (specifically the T1 time), there was always an improved CNR at lower fields compared to linear dependency. Further, in some tumor sites, the CNR at lower fields was found to be comparable to, or sometimes higher than those at higher fields (i.e., bSSFP CNR for glioma, kidney, and liver tumors). CONCLUSIONS In terms of CNR, lower B0 fields have been shown to perform as well or better than higher fields for some tumor sites due to superior T1 contrast. In other sites this effect was less pronounced, reversing the CNR advantage. This complex relationship between CNR and B0 reveals both low and high magnetic fields as viable options for tumor tracking in MRI/radiotherapy hybrids.
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Affiliation(s)
- K Wachowicz
- Division of Medical Physics, Department of Oncology, University of Alberta, Cross Cancer Institute, 11560 University Avenue, Edmonton, Alberta T6G 1Z2, Canada
| | - N De Zanche
- Division of Medical Physics, Department of Oncology, University of Alberta, Cross Cancer Institute, 11560 University Avenue, Edmonton, Alberta T6G 1Z2, Canada
| | - E Yip
- Division of Medical Physics, Department of Oncology, University of Alberta, Cross Cancer Institute, 11560 University Avenue, Edmonton, Alberta T6G 1Z2, Canada
| | - V Volotovskyy
- Cross Cancer Institute, Alberta Health Services, 11560 University Avenue, Edmonton, Alberta T6G 1Z2, Canada
| | - B G Fallone
- Department of Medical Physics, Cross Cancer Institute, 11560 University Avenue, Edmonton, Alberta T6G 1Z2, Canada and Departments of Oncology and Physics, University of Alberta, 11560 University Avenue, Edmonton, Alberta T6G 1Z2, Canada
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Martínez Ortega J, Gómez González N, Castro Tejero P, Pinto Monedero M, Tolani NB, Núñez Martín L, Sánchez Montero R. A portal dosimetry dose prediction method based on collapsed cone algorithm using the clinical beam model. Med Phys 2017; 44:333-341. [PMID: 28102946 DOI: 10.1002/mp.12018] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2016] [Revised: 09/28/2016] [Accepted: 11/13/2016] [Indexed: 11/12/2022] Open
Abstract
PURPOSE Amorphous silicon electronical portal imaging devices (EPIDs) are widely used for dosimetric measurements in Radiation Therapy. The purpose of this work was to determine if a portal dose prediction method can be utilized for dose map calculations based on the linear accelerator model within a commercial treatment planning system (Pinnacle3 v8.0 m). METHODS The method was developed for a 6 MV photon beam on the Varian Clinac 21-EX, at a nominal dose rate of 400 MU/min. The Varian aS1000 EPID was unmounted from the linear accelerator and scanned to acquire CT images of the EPID. The CT images were imported into Pinnacle3 and were used as a quality assurance phantom to calculate dose on the EPID setup at a source to detector distance of 105 cm. The best match of the dose distributions was obtained considering the image plane located at 106 cm from the source to detector plane. The EPID was calibrated according to the manufacturer procedure and corrections were made for output factors. Arm-backscattering effect, based on profile correction curves, has been introduced. Five low-modulated and three high-modulated clinical planned treatments were predicted and measured with the method presented here and with MatriXX (IBA Dosimetry, Schwarzenbruck, Germany). RESULTS A portal dose prediction method based on Pinnacle3 was developed without modifying the commissioned parameters of the model in use in the clinic. CT images of the EPID were acquired and used as a quality assurance phantom. The CT images indicated a mean density of 1.16 g/cm3 for the sensitive area of the EPID. Output factor measured with the EPID were lower for small fields and larger for larger fields (beyond 10 × 10 cm2 ). Arm-backscatter correction showed a better agreement at the target side of the EPID. Analysis of Gamma index comparison (3%, 3 mm) indicated a minimum of 97.4% pass rate for low modulated and 98.3% for high modulated treatments. Pass rates were similar for MatriXX measurements. CONCLUSIONS The method developed here can be easily implemented into clinic, as neither additional modeling of the clinical energy nor an independent image prediction algorithm are necessary. The main advantage of this method is that portal dose prediction is calculated with the same algorithm and beam model used for patient dose distribution calculation. This method was independently validated with an ionization chamber matrix.
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Affiliation(s)
- J Martínez Ortega
- Medical Physics Department, Hospital Universitario Puerta de Hierro. C/Manuel de Falla 1, 28222, Majadahonda, (Madrid), Spain
| | - N Gómez González
- Medical Physics Department, Hospital Universitario Puerta de Hierro. C/Manuel de Falla 1, 28222, Majadahonda, (Madrid), Spain
| | - P Castro Tejero
- Radiation Physics, Radiation Oncology Department, Hospital Universitario de La Princesa. C/Diego de León 62, 28006, Madrid, Spain
| | - M Pinto Monedero
- Medical Physics Department, Hospital Universitario Puerta de Hierro. C/Manuel de Falla 1, 28222, Majadahonda, (Madrid), Spain
| | - N B Tolani
- Radiotherapy Department, ME DeBakey VA Medical Center. 2002 Holcombe Boulevard, 77030, Houston, Texas, USA
| | - L Núñez Martín
- Medical Physics Department, Hospital Universitario Puerta de Hierro. C/Manuel de Falla 1, 28222, Majadahonda, (Madrid), Spain
| | - R Sánchez Montero
- Signal Theory and Communications Department, University of Alcala. Campus Universitario, Ctra Madrid-Barcelona, km 33.600., 28805, Alcala de Henares (Madrid), Spain
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Baddour N, Mandelis A. The Effect of Acoustic Impedance on Subsurface Absorber Geometry Reconstruction using 1D Frequency-Domain Photoacoustics. PHOTOACOUSTICS 2015; 3:132-142. [PMID: 31467844 PMCID: PMC6713063 DOI: 10.1016/j.pacs.2015.10.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2015] [Revised: 10/05/2015] [Accepted: 10/22/2015] [Indexed: 05/13/2023]
Abstract
This paper considers the effect of an impedance mismatch between the absorber and its surroundings on the aborber reconstructions from the photoacoustic signal profile, in particular when a non-delta input pulse is used. A transfer function approach is taken, demonstrating in the case of impedance mismatch how the total response can be modeled using the sum of the mismatch-free response and its time-delayed, time-reversed replicas, which may or may not overlap. It is shown how this approach can be exploited to accommodate the effects of non-delta pulses and/or pulse-equivalent waveforms such as linear-frequency-modulated (LFM) chirps, and impedance mismatches in any inversion algorithms, even in the presence of large reflection coefficients. As a consequence, for simple-absorber reconstruction algorithms that assume impulses or 'short enough' pulses, the compressive portion of the measured response may be used in reconstruction formulas that do not model the impedance mismatch, regardless of the size of the mismatch. For longer-duration input waveforms, it is demonstrated how existing reconstruction methods can be successfully adapted to include the effect of the impedance mismatch. Simulations are used to illustrate these ideas. The gained physical insight into how components of the generated pressure wave carry absorber information is then exploited for signal inversion and absorber reconstruction in the frequency domain when multi-frequency modulation chirps are used for photoacoustic radar pressure measurements. The foundational theoretical developments ultimately address impendance mismatch issues germane to the major photoacoustic frequency-domain imaging modality to-date, which is the photoacoustic radar.
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Affiliation(s)
- Natalie Baddour
- Department of Mechanical Engineering, University of Ottawa, 161 Louis Pasteur, Ottawa, K1 N 6N5, Canada
- Corresponding author.
| | - Andreas Mandelis
- Centre for Advanced Diffusion-Wave Technologies, Department of Mechanical and Industrial Engineering, 5 King's College Road, University of Toronto, Toronto, M5S 3G8, Canada
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Hu Y, Zhao W, Du D, Wooten HO, Olsen JR, Gay HA, Michalski JM, Mutic S. Magnetic resonance imaging-based treatment planning for prostate cancer: Use of population average tissue densities within the irradiated volume to improve plan accuracy. Pract Radiat Oncol 2015; 5:248-56. [DOI: 10.1016/j.prro.2014.12.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2014] [Revised: 12/09/2014] [Accepted: 12/23/2014] [Indexed: 11/16/2022]
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Material discrimination based on K-edge characteristics. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2013; 2013:308520. [PMID: 24319493 PMCID: PMC3844261 DOI: 10.1155/2013/308520] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/25/2013] [Revised: 09/28/2013] [Accepted: 10/02/2013] [Indexed: 11/19/2022]
Abstract
Spectral/multienergy CT employing the state-of-the-art energy-discriminative photon-counting detector can identify absorption features in the multiple ranges of photon energies and has the potential to distinguish different materials based on K-edge characteristics. K-edge characteristics involve the sudden attenuation increase in the attenuation profile of a relatively high atomic number material. Hence, spectral CT can utilize material K-edge characteristics (sudden attenuation increase) to capture images in available energy bins (levels/windows) to distinguish different material components. In this paper, we propose an imaging model based on K-edge characteristics for maximum material discrimination with spectral CT. The wider the energy bin width is, the lower the noise level is, but the poorer the reconstructed image contrast is. Here, we introduce the contrast-to-noise ratio (CNR) criterion to optimize the energy bin width after the K-edge jump for the maximum CNR. In the simulation, we analyze the reconstructed image quality in different energy bins and demonstrate that our proposed optimization approach can maximize CNR between target region and background region in reconstructed image.
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Disher B, Hajdok G, Wang A, Craig J, Gaede S, Battista JJ. Correction for ‘artificial’ electron disequilibrium due to cone-beam CT density errors: implications for on-line adaptive stereotactic body radiation therapy of lung. Phys Med Biol 2013; 58:4157-74. [DOI: 10.1088/0031-9155/58/12/4157] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Feasibility of CBCT-based dose calculation: Comparative analysis of HU adjustment techniques. Radiother Oncol 2012; 104:249-56. [DOI: 10.1016/j.radonc.2012.06.007] [Citation(s) in RCA: 94] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2011] [Revised: 06/10/2012] [Accepted: 06/17/2012] [Indexed: 11/22/2022]
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Intravenous Contrast Agent Influence on Thoracic Computed Tomography Simulation Investigated Through A Heterogeneous Dose Calculation Method Using 5-Bulk Densities. Am J Clin Oncol 2012; 35:110-4. [DOI: 10.1097/coc.0b013e318209a910] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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