Fibropapillomatosis: A Review of the Disease with Attention to the Situation Northern Coast of Brazil

Fibropapillomatosis in sea turtles is a potentially debilitating and fatal disease for which there is still a lack of knowledge, especially for specific regions of Brazil. The diagnosis is made through the observation of clinical manifestations, and despite its association with Chelonid Alphaherpesvirus 5 (ChHV5) as the etiological agent, the expression of the disease may also be related to immunological and environmental factors caused by anthropic degradation of the environment. Thus, this review aims to elucidate what is known about this disease globally, and especially in various regions of Brazil, promoting a better understanding of its evolution, spatiotemporal prevalence, and relationship with human activities. Furthermore, the review explores the molecular biology of ChHV5, including its genomic structure, replication cycle, and mechanisms of pathogenesis. The role of environmental factors, such as temperature and pollution, in modulating ChHV5 infection and FP development is also discussed. Additionally, the review summarizes current diagnostic methods for detecting ChHV5 infection in sea turtles, highlighting the importance of early detection and monitoring for effective disease management and conservation efforts. Finally, the review outlines future research directions aimed at improving our understanding of ChHV5 and developing strategies for FP control and prevention in sea turtle populations.

Hawksbill Sea Turtle (Eretmochelys imbricata) Blood and Eggs Organochlorine Pesticides Concentrations and Embryonic Development in a Nesting Area (Yucatan Peninsula, Mexico)

Environmental contaminants with chemical origins, such as organochlorine pesticides (OCPs) have major impacts on the health of marine animals, including sea turtles, due to the bioaccumulation of those substances by transference throughout the food chain. The effects of environmental pollution on the health of marine turtles are very important for management strategies and conservation. During recent decades, the south Gulf of Mexico and the Yucatan Peninsula have suffered from increasingly frequent disturbances from continental landmasses, river systems, urban wastewater runoff, port areas, tourism, industrial activities, pesticides from agricultural use, and other pollutants, such as metals, persistent organic pollutants (POPs) and hydrocarbons (from the oil industry activities), which contaminate water and sediments and worsen the environmental quality of the marine ecosystem in this region. In this study, we assessed the concentrations of OCPs in the blood and eggs of 60 hawksbill turtles (Eretmochelys imbricata) nesting at the Punta Xen turtle camp, and their effects on the nesting population's reproductive performance: specifically, maternal transfer and embryonic development were analyzed. Hematologic characteristics, including packed cell volume, white blood cell count, red blood cell count, and haemoglobin levels, and plasma chemistry values, including creatinine, blood urea nitrogen, uric acid, triglyceride, total cholesterol and glucose, were also measured. The general health of the turtles in this study, as well as their levels of urea, serum creatinine, glucose, uric, acid, cholesterol, and triglyceride, fell within normal ranges and was similar to other normal values, which could indicate the turtles' good energy levels and body conditions for nest-building activity, with all of the turtles able to successfully come ashore to nest. All the same, the obtained results also indicate that OCPs affect the nesting and reproductive performance of the hawksbill turtles, as well as their fertility and the development of the population of eggs and reproductive performance, specifically in terms of maternal transference and embryonic development. There were significant differences in the concentrations of OCPs (ΣHCHs and ΣDienes) between maternal blood and eggs, indicating that these chemicals are transferred from nesting females to eggs and, ultimately, to hatchlings. OCPs may, therefore, have an effect on the health and reproductive performance of hawksbill turtles, both in terms of their fertility and egg development. Conservation strategies need to be species-specific, due to differences in feeding, and address the reasons for any decline, focusing on regional assessments. Thus, accurate and comparable monitoring data are necessary, which requires the standardization of monitoring protocols.

Good and bad news for ocean predators

Some tunas and billfishes are recovering, but sharks continue to decline

Seventy years of tunas, billfishes, and sharks as sentinels of global ocean health

Fishing activity is closely monitored to an increasing degree, but its effects on biodiversity have not received such attention. Using iconic and well-studied fish species such as tunas, billfishes, and sharks, we calculate a continuous Red List Index of yearly changes in extinction risk over 70 years to track progress toward global sustainability and biodiversity targets. We show that this well-established biodiversity indicator is highly sensitive and responsive to fishing mortality. After ~58 years of increasing risk of extinction, effective fisheries management has shifted the biodiversity loss curve for tunas and billfishes, whereas the curve continues to worsen for sharks, which are highly undermanaged. While populations of highly valuable commercial species are being rebuilt, the next management challenge is to halt and reverse the harm afflicted by these same fisheries to broad oceanic biodiversity.

Trade-offs between bycatch and target catches in static versus dynamic fishery closures

The incidental catch of threatened species is still one of the main barriers to fisheries sustainability. What would happen if we closed 30% of the ocean to fishing with the goal of reducing bycatch? Analyzing 15 different fisheries around the globe, we found that under static area management, such as classic no-take marine area closures, observed bycatch could be reduced by 16%. However, under dynamic ocean management based on observed bycatch and closing the same total area but fragmented in smaller areas that can move year to year, that reduction can increase up to 57% at minimal or no loss of target catch.

While there have been recent improvements in reducing bycatch in many fisheries, bycatch remains a threat for numerous species around the globe. Static spatial and temporal closures are used in many places as a tool to reduce bycatch. However, their effectiveness in achieving this goal is uncertain, particularly for highly mobile species. We evaluated evidence for the effects of temporal, static, and dynamic area closures on the bycatch and target catch of 15 fisheries around the world. Assuming perfect knowledge of where the catch and bycatch occurs and a closure of 30% of the fishing area, we found that dynamic area closures could reduce bycatch by an average of 57% without sacrificing catch of target species, compared to 16% reductions in bycatch achievable by static closures. The degree of bycatch reduction achievable for a certain quantity of target catch was related to the correlation in space and time between target and bycatch species. If the correlation was high, it was harder to find an area to reduce bycatch without sacrificing catch of target species. If the goal of spatial closures is to reduce bycatch, our results suggest that dynamic management provides substantially better outcomes than classic static marine area closures. The use of dynamic ocean management might be difficult to implement and enforce in many regions. Nevertheless, dynamic approaches will be increasingly valuable as climate change drives species and fisheries into new habitats or extended ranges, altering species-fishery interactions and underscoring the need for more responsive and flexible regulatory mechanisms.

Marine heatwave challenges solutions to human-wildlife conflict

Despite the increasing frequency and magnitude of extreme climate events, little is known about how their impacts flow through social and ecological systems or whether management actions can dampen deleterious effects. We examined how the record 2014-2016 Northeast Pacific marine heatwave influenced trade-offs in managing conflict between conservation goals and human activities using a case study on large whale entanglements in the U.S. west coast's most lucrative fishery (the Dungeness crab fishery). We showed that this extreme climate event diminished the power of multiple management strategies to resolve trade-offs between entanglement risk and fishery revenue, transforming near win-win to clear win-lose outcomes (for whales and fishers, respectively). While some actions were more cost-effective than others, there was no silver-bullet strategy to reduce the severity of these trade-offs. Our study highlights how extreme climate events can exacerbate human-wildlife conflict, and emphasizes the need for innovative management and policy interventions that provide ecologically and socially sustainable solutions in an era of rapid environmental change.

Bioactivity of the Protein Hydrolysates Obtained from the Most Abundant Crustacean Bycatch

The animals from bycatch of the shrimp fisheries can be a source of natural products and bioactive compounds. Thus, the present study aimed to evaluate the bioactivity of protein hydrolysates prepared from the two most abundant crabs from the bycatch of shrimp fisheries in Brazil (Callinectes ornatus and Hepatus pudibundus). Samples of C. ornatus and H. pudibundus were collected in the region of Ubatuba, State of São Paulo, Brazil. Muscles with small pieces of exoskeleton of both species were hydrolyzed using two enzymes, Alcalase 2.4 L® or Protamex®. The in vitro antioxidant capacity was analyzed used three methods: DPPH, sulfhydryl groups, and peroxyl radicals. Additionally, the cytotoxicity of the hydrolysates was investigated using pre-osteoblasts cells. The results showed that the degree of hydrolysis (DH) of H. pudibundus was superior to DH of C. ornatus using both enzymes and was higher when using the enzyme Alcalase 2.4 L® (32.0% ± 1.9). The analysis suggested that the hydrolysates have antioxidant activity. Besides that, no cytotoxic effect was observed on cell viability. Thus, protein hydrolysates of C. ornatus and H. pudibundus have bioactivity, which add value to these bycatch species and suggests their potential use as nutraceutical ingredient in the food industry.

Understanding the complex environmental management through a len of food-water-ecosystem nexus: Insights from an ecosystem restoration hotspot in dryland

The Ecosystem Restoration Project (ERP) is a critical and urgent practice to achieve the land degradation neutrality (LDN) targets. However, an insufficient understanding of the balance between contrasting sectors of the food-water-ecosystem nexus results in ineffectiveness in supporting complex environmental management (CEM), leading to undesirable ERP failures. The Ordos Plateau case identified the nexus evolution and the non-linear interactions between sectors, which were expected to support adaptive strategy formulations for CEM and achieve win-win outcomes. Revegetation in drylands substantially boosted ecosystem restoration, alleviating soil erosion. However, the excessive reliance on returning cropland to woodland and grassland has caused a significant loss of arable and grazing land. During the initial period of ERPs, this exacerbated decline in grain and meat productivity. In addition, aggressive revegetation activities have also reduced runoff yield and depleted soil water resources. Water scarcity is recognized as the most challenging issue in dryland ecosystem restoration, heavily influencing the interactions between sectors and threatening the long-term sustainability of ERPs. To accommodate for regional water carrying capacity, ERPs should adopt and properly allocate the use of suitable plant species with a proven anti-drought capability and high survival ratios without additional human interventions. In addition, the evolution regimes, driving factors, critical thresholds, and complex feedbacks between the nexus sectors should be fully understood to address the water resources constraints and reconcile trade-offs. This would enable the prevention of ecosystem shifts to undesirable failures and inform timely and cost-effective CEM to achieve the LDN targets.

Critical In-Water Habitats for Post-Nesting Sea Turtles from the Southern Gulf of Mexico

Marine turtles are globally endangered species that spend more than 95% of their life cycle in in-water habitats. Nevertheless, most of the conservation, recovery and research efforts have targeted the on-land habitats, due to their easier access, where adult females lay their eggs. Targeting the large knowledge gaps on the in-water critical habitats of turtles, particularly in the Large Marine Ecosystem Gulf of Mexico, is crucial for their conservation and recovery in the long term. We used satellite telemetry to track 85 nesting females from their beaches after they nested to identify their feeding and residency habitats, their migratory corridors and to describe the context for those areas. We delimited major migratory corridors in the southern Gulf of Mexico and West Caribbean and described physical features of internesting and feeding home ranges located mainly around the Yucatan Peninsula and Veracruz, Mexico. We also contributed by describing general aggregation and movement patterns for the four marine turtle species in the Atlantic, expanding the knowledge of the studied species. Several tracked individuals emigrated from the Gulf of Mexico to as far as Nicaragua, Honduras, and the Bahamas. This information is critical for identifying gaps in marine protection and for deciphering the spatial connectivity in large ocean basins, and it provides an opportunity to assess potential impacts on marine turtle populations and their habitats.

Characterizing Industrial and Artisanal Fishing Vessel Catch Composition Using Environmental DNA and Satellite-Based Tracking Data

The decline in wild-caught fisheries paired with increasing global seafood demand is pushing the need for seafood sustainability to the forefront of national and regional priorities. Validation of species identity is a crucial early step, yet conventional monitoring and surveillance tools are limited in their effectiveness because they are extremely time-consuming and require expertise in fish identification. DNA barcoding methods are a versatile tool for the genetic monitoring of wildlife products; however, they are also limited by requiring individual tissue samples from target specimens which may not always be possible given the speed and scale of seafood operations. To circumvent the need to individually sample organisms, we pilot an approach that uses forensic environmental DNA (eDNA) metabarcoding to profile fish species composition from the meltwater in fish holds on industrial and artisanal fishing vessels in Ecuador. Fish identified genetically as present were compared to target species reported by each vessel’s crew. Additionally, we contrasted the geographic range of identified species against the satellite-based fishing route data of industrial vessels to determine if identified species could be reasonably expected in the catch.

Biological activities of the protein hydrolysate obtained from two fishes common in the fisheries bycatch

Shrimp trawling is an important socio-economic activity; however, the bycatch can be problematic to the environment. Thus, the present study investigated potential uses of the bycatch to generate value-added products. The biological activity of the protein hydrolysates obtained from the two most abundant fish species (Micropogonias furnieri and Paralonchurus brasiliensis) was evaluated. Muscle and skin samples of both species were hydrolyzed using two enzymes, Alcalase 2.4 L® or Protamex®. The in vitro antioxidant capacity against peroxyl radicals, DPPH, and sulfhydryl groups were analyzed. Cell viability, Western Blotting, Zymogram, and Real-time PCR analyses were performed. The results showed that the hydrolysates have antioxidant activity and no effect on cell viability at doses lower than 16 mg/mL. In addition, they can modulate extracellular remodelling and intracellular pathways related to cell adhesion. Thus, the hydrolysis of the fish bycatch allows the release of bioactive peptides with potential use in the food industry.

Resurgence of an apex marine predator and the decline in prey body size

Recent recoveries of marine mammal populations worldwide have heightened concerns for their potential impacts on global fisheries. While predator-induced reductions in prey abundance have been documented, trait-mediated changes in life-history characteristics are rarely considered. Here we provide a striking example of the impact of a resurging apex marine predator on a commercially important fish species through changes in prey life-history traits. We find that widespread declines in the body size of Chinook salmon over the past 50 y can be explained by intensified predation by growing populations of resident killer whales that selectively feed on large Chinook salmon, thus revealing a potential conflict between salmon fisheries and marine mammal conservation objectives.

In light of recent recoveries of marine mammal populations worldwide and heightened concern about their impacts on marine food webs and global fisheries, it has become increasingly important to understand the potential impacts of large marine mammal predators on prey populations and their life-history traits. In coastal waters of the northeast Pacific Ocean, marine mammals have increased in abundance over the past 40 to 50 y, including fish-eating killer whales that feed primarily on Chinook salmon. Chinook salmon, a species of high cultural and economic value, have exhibited marked declines in average size and age throughout most of their North American range. This raises the question of whether size-selective predation by marine mammals is generating these trends in life-history characteristics. Here we show that increased predation since the 1970s, but not fishery selection alone, can explain the changes in age and size structure observed for Chinook salmon populations along the west coast of North America. Simulations suggest that the decline in mean size results from the selective removal of large fish and an evolutionary shift toward faster growth and earlier maturation caused by selection. Our conclusion that intensifying predation by fish-eating killer whales contributes to the continuing decline in Chinook salmon body size points to conflicting management and conservation objectives for these two iconic species.

Rebuilding global fisheries under uncertainty

Current and future prospects for successfully rebuilding global fisheries remain debated due to uncertain stock status, variable management success, and disruptive environmental change. While scientists routinely account for some of this uncertainty in population models, the mechanisms by which this translates into decision-making and policy are problematic and can lead to unintentional overexploitation. Here, we explicitly track the role of measurement uncertainty and environmental variation in the decision-making process for setting catch quotas. Analyzing 109 well-sampled stocks from all oceans, we show that current practices may attain 55% recovery on average, while richer decision methods borrowed from robotics yield 85% recovery of global stocks by midcentury, higher economic returns, and greater robustness to environmental surprises. These results challenge the consensus that global fisheries can be rebuilt by existing approaches alone, while also underscoring that rebuilding stocks may still be achieved by improved decision-making tools that optimally manage this uncertainty.

Resolving the Measurement Uncertainty Paradox in Ecological Management

Ecological management and decision-making typically focus on uncertainty about the future, but surprisingly little is known about how to account for uncertainty of the present: that is, the realities of having only partial or imperfect measurements. Our primary paradigms for handling decisions under uncertainty-the precautionary principle and optimal control-have so far given contradictory results. This paradox is best illustrated in the example of fisheries management, where many ideas that guide thinking about ecological decision-making were first developed. We find that simplistic optimal control approaches have repeatedly concluded that a manager should increase catch quotas when faced with greater uncertainty about the fish biomass. Current best practices take a more precautionary approach, decreasing catch quotas by a fixed amount to account for uncertainty. Using comparisons to both simulated and historical catch data, we find that neither approach is sufficient to avoid stock collapses under moderate observational uncertainty. Using partially observed Markov decision process (POMDP) methods, we demonstrate how this paradox arises from flaws in the standard theory, which contributes to overexploitation of fisheries and increased probability of economic and ecological collapse. In contrast, we find that POMDP-based management avoids such overexploitation while also generating higher economic value. These results have significant implications for how we handle uncertainty in both fisheries and ecological management more generally.