Immunoprecipitation of some forms of simian virus 40 large-T antigen by antibodies to synthetic peptides

Synthetic oligopeptides define epitopes at the amino- and carboxy-terminus of simian virus 40 large tumor antigen which are recognized by monoclonal antibodies

Synthetic oligopeptides were used to define the epitopes recognized by monoclonal antibodies directed against the SV40 large tumor (T) antigen. The two monoclonal antibodies PAb 1622 and PAb 1626 reacted with the N-terminal undecapeptide Met(1)-Leu(11) as detected by inhibition of nuclear SV40 T antigen immunofluorescence. Antibody PAb 1605 recognized the hexapeptide Thr(701)-Pro(706) at the carboxy-terminus of the SV40 T antigen as detected by inhibition of an enzyme-linked immunosorbent assay. The specificities of these monoclonal antibodies differ from those of antibodies previously raised against the respective synthetic oligopeptides.

The effect of protein context on nuclear location signal function

The effect of position and number and of another intracellular location signal on the activity of the nuclear location signal was investigated. A minimal signal was inserted into several sites within the polypeptide chain of pyruvate kinase. The results observed suggest that a nuclear location signal can function at a variety of positions within a protein but that in some locations its activity is masked. Multiple copies of a partially defective signal were integrated into pyruvate kinase. The data suggest that multiple signals can cooperate to enhance nuclear accumulation. A nuclear location signal failed to function when inserted into polyomavirus middle T but was active in an identical variant lacking the carboxy-terminal hydrophobic tail. We conclude that while a minimal nuclear location signal is sufficient for nuclear localization, its activity is crucially dependent on the protein context within which it is present.

Induction and characterization of antisera against terminal and internal peptides of SV40 large T antigen

Thirteen synthetic peptides corresponding to different regions of the SV40 large T antigen were used as immunogens after coupling to a carrier protein. All peptide conjugates elicited sera that recognized the inducing peptide. In 10 cases the corresponding sites in the native large T antigen also were recognized, as determined by immunoprecipitation. The degree of recognition of the native protein varied between 0.5 and 80%, the most reactive sera being those induced by the terminal peptides. The ability of internal peptides to induce antibodies reactive with native large T antigen appeared to be correlated with peptide hydrophilicity and possibly atomic mobility. No such correlation was apparent with predicted features of secondary structure. The influence of peptide length on induction of protein-recognizing antisera will also be discussed.

DNA-binding region of the simian virus 40 tumor antigen

The simian virus 40 (SV40) tumor (T) antigen was purified by immunoaffinity chromatography and cleaved with small amounts of trypsin, and the resulting fragments were subjected to SV40 DNA cellulose chromatography. A 44,000-molecular-weight fragment (44K fragment) from the left end of the molecule and a 30K fragment mapping from approximately Lys 131 to Lys 371 bound to the column and were eluted with 1 M NaCl. In a second series of experiments, T antigen was immunoprecipitated with hamster anti-T serum or various monoclonal antibodies and partially digested with trypsin. Fragments that were solubilized by this treatment were tested for DNA-binding activity by using an SV40 DNA fragment-binding assay. A 17K fragment which originated from the amino-terminal region of the polypeptide had no apparent binding activity in this assay. On the other hand, larger fragments (76K, 46K, and 30K) whose amino termini were mapped around Lys 131 did display DNA-binding activity. Finally, complexes consisting of SV40 DNA and T-antigen fragments were precipitated in the DNA-binding assay with monoclonal antibodies that recognize the central region of the protein; however, antibodies with specificities to the amino- or carboxy-terminal regions were inactive. These results strongly suggest that the DNA-binding region of T antigen lies approximately between Lys 131 and Lys 371, corresponding to 0.51 and 0.37 map units on the DNA.

Kinetics of nuclear transport and oligomerization of simian virus 40 large T antigen

The kinetics of nuclear transport and of oligomerization of simian virus 40 (SV40) large T antigen in lytically infected cells were investigated by pulse-chase experiments, cell fractionation, and sedimentation analyses in sucrose gradients. After synthesis, large T was rapidly translocated to the nucleus. Within 10 min, half of the pulse-labeled molecules had entered the nucleus and after an additional 30 min, nuclear accumulation of large T reached a constant plateau of about 95%. Within that time, the majority of large T was in monomeric form suggesting that nuclear transport takes place in this state. In the nucleus, conversion to tetramers proceeded slowly and steadily. By 60 min half of the molecules had formed tetramers and by 6 hr a steady-state ratio between tetramers and monomers of 4:1 was observed. A small fraction of large T remaining in the cytoplasm oligomerized considerably faster than large T in the nuclear fraction. This phenomenon of accelerated oligomerization was also observed with a mutant of large T defective for nuclear transport. Perhaps, the nuclear envelope is a barrier for the complex forms of large T which prevents premature oligomers in the cytoplasm from entering the nucleus and oligomers in the nucleus from migrating back to the cytoplasm.

Peptide antibodies: new tools for cell biology

The process of preparing antibodies against small peptide subsets of larger proteins is now a very routine and effective tool for cell biological investigations. Now that the identification of genes is commonplace, it is imperative to be able to identify, purify, and characterize the products of these genes. Antibodies against synthetic peptides will aid in discovering the elusive functions of these proteins. Over the past 5 years, peptide antibodies have contributed, and they will doubtless continue to contribute, to the identification of functional domains of proteins. Peptide antibodies provide a means for identifying functional domains conserved during the evolution of families of proteins, and for inhibiting specific functions of multifunctional proteins. Domain-specific antibodies have already increased the molecular resolution with which cell biologists can immunologically examine the function of cellular proteins. Finally, many proteins are now known to exist in subtly different forms, either as the products of separate genes or as the result of posttranslational modifications. Peptide antibodies allow molecular cell biologists, for the first time, to design antibodies for the specific assay of altered forms of a protein. Because they are amenable to specific immunolocalization of highly similar species, peptide antibodies can be considered to be subcellular probes of gene expression and posttranslational modification.

Simian virus 40 origin DNA-binding domain on large T antigen

Fifty variant forms of simian virus 40 (SV40) large T antigen bearing point, multiple point, deletion, or termination mutations within a region of the protein thought to be involved in DNA binding were tested for their ability to bind to SV40 origin DNA. A number of the mutant large T species including some with point mutations were unable to bind, whereas many were wild type in this activity. The clustering of the mutations that are defective in origin DNA binding both reported here and by others suggests a DNA-binding domain on large T maps between residues 139 and approximately 220, with a particularly sensitive sequence between amino acids 147 and 166. The results indicate that the domain is involved in binding to both site I and site II on SV40 DNA, but it remains unclear whether it is responsible for binding to cellular DNA. Since all the mutants retain the ability to transform Rat-1 cells, we conclude that the ability of large T to bind to SV40 origin DNA is not a prerequisite for its transforming activity.

Could the loss of regulation of genetic expression in cancer cells be used to cause their necrosis?

In cancer cells the control over the genetic message involved in the induction of mitosis is irreversibly lost. This fact is indicated by certain phenomena displayed by cancer cells under restricted nutritional conditions. Cells transformed by DNA viruses (which stabilize "p53") keep on cycling and die. In starving cells at the inside of tumors the synthesis of pre-rRNA still proceeds while all other anabolic processes are already at a standstill. The reason is that glutamine, glycine and aspartate are channelled into the enzymatic pathways for the synthesis of nucleosides: thus, protein synthesis is denied those aminoacids. Such situations might be imitated through the administration of excess nucleosides and (within limits) the simultaneous restriction of some selected aminoacids. DNA replication depends on the stabilization of p53, but an accumulation of pre-rRNA might occur, which ultimately might be harmful for cancer cells. Several ways to improve this rationale might be tested on cultured cells and on research animals. They include the destruction of methionine with bacterial enzymes, or the addition of ornithine, a precursor of putrescine, which is an important factor of DNA and pre-rRNA synthesis.