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Li S, Zhang Y, Xin X, Ding C, Lv F, Mo W, Xia Y, Wang S, Cai J, Sun L, Du M, Dong C, Gao X, Dai X, Zhang J, Sun J. The Osmotin-Like Protein Gene PdOLP1 Is Involved in Secondary Cell Wall Biosynthesis during Wood Formation in Poplar. Int J Mol Sci 2020; 21:E3993. [PMID: 32498411 PMCID: PMC7312728 DOI: 10.3390/ijms21113993] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Revised: 05/13/2020] [Accepted: 05/28/2020] [Indexed: 12/26/2022] Open
Abstract
Osmotin-like proteins (OLPs) mediate defenses against abiotic and biotic stresses and fungal pathogens in plants. However, no OLPs have been functionally elucidated in poplar. Here, we report an osmotin-like protein designated PdOLP1 from Populus deltoides (Marsh.). Expression analysis showed that PdOLP1 transcripts were mainly present in immature xylem and immature phloem during vascular tissue development in P. deltoides. We conducted phenotypic, anatomical, and molecular analyses of PdOLP1-overexpressing lines and the PdOLP1-downregulated hybrid poplar 84K (Populus alba × Populus glandulosa) (Hybrid poplar 84K PagOLP1, PagOLP2, PagOLP3 and PagOLP4 are highly homologous to PdOLP1, and are downregulated in PdOLP1-downregulated hybrid poplar 84K). The overexpression of PdOLP1 led to a reduction in the radial width and cell layer number in the xylem and phloem zones, in expression of genes involved in lignin biosynthesis, and in the fibers and vessels of xylem cell walls in the overexpressing lines. Additionally, the xylem vessels and fibers of PdOLP1-downregulated poplar exhibited increased secondary cell wall thickness. Elevated expression of secondary wall biosynthetic genes was accompanied by increases in lignin content, dry weight biomass, and carbon storage in PdOLP1-downregulated lines. A PdOLP1 coexpression network was constructed and showed that PdOLP1 was coexpressed with a large number of genes involved in secondary cell wall biosynthesis and wood development in poplar. Moreover, based on transcriptional activation assays, PtobZIP5 and PtobHLH7 activated the PdOLP1 promoter, whereas PtoBLH8 and PtoWRKY40 repressed it. A yeast one-hybrid (Y1H) assay confirmed interaction of PtoBLH8, PtoMYB3, and PtoWRKY40 with the PdOLP1 promoter in vivo. Together, our results suggest that PdOLP1 is a negative regulator of secondary wall biosynthesis and may be valuable for manipulating secondary cell wall deposition to improve carbon fixation efficiency in tree species.
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Affiliation(s)
- Shaofeng Li
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Yaoxiang Zhang
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Xuebing Xin
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Changjun Ding
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Key Laboratory of Tree Breeding and Cultivation, State Forestry Administration, Beijing 100091, China;
| | - Fuling Lv
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Wenjuan Mo
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Yongxiu Xia
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Shaoli Wang
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Jingyan Cai
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Lifang Sun
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Manyi Du
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Chenxi Dong
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Xu Gao
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Xinlu Dai
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
| | - Jianhui Zhang
- Department of Pharmaceutical Science, Biomanufacturing Research Institute and Technology Enterprise, North Carolina Central University, Durham, NC 27707, USA
| | - Jinshuang Sun
- Experimental Center of Forestry in North China, Chinese Academy of Forestry, Beijing 100023, China; (S.L.); (Y.Z.); (X.X.); (F.L.); (W.M.); (Y.X.); (S.W.); (J.C.); (L.S.); (M.D.); (C.D.); (X.G.); (X.D.)
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Gorshkov O, Mokshina N, Ibragimova N, Ageeva M, Gogoleva N, Gorshkova T. Phloem fibres as motors of gravitropic behaviour of flax plants: level of transcriptome. FUNCTIONAL PLANT BIOLOGY : FPB 2018; 45:203-214. [PMID: 32291034 DOI: 10.1071/fp16348] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2016] [Accepted: 01/16/2017] [Indexed: 05/25/2023]
Abstract
Restoration of stem vertical position after plant inclination is a widely spread version of plant orientation in accordance with gravity vector direction. Gravitropic behaviour of flax plants involves the formation of curvature in stem region that has ceased elongation long in advance of stem inclination. The important participants of such behaviour are phloem fibres with constitutively formed tertiary cell wall (G-layer). We performed the large-scale transcriptome profiling of phloem fibres isolated from pulling and opposite sides of gravitropic curvature and compared with control plant fibres. Significant changes in transcript abundance take place for genes encoding proteins of several ion channels, transcription factors and other regulating elements. The largest number of upregulated genes belonged to the cell wall category; many of those were specifically upregulated in fibres of pulling stem side. The obtained data permit to suggest the mechanism of fibre participation in gravitropic reaction that involves the increase of turgor pressure and the rearrangements of cell wall structure in order to improve contractile properties, and to identify the regulatory elements that operate specifically in the fibres of the pulling stem side making gelatinous phloem fibres an important element of gravitropic response in herbaceous plants.
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Affiliation(s)
- Oleg Gorshkov
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Natalia Mokshina
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Nadezda Ibragimova
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Marina Ageeva
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Natalia Gogoleva
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, 420111, Russia
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Chabi M, Goulas E, Leclercq CC, de Waele I, Rihouey C, Cenci U, Day A, Blervacq AS, Neutelings G, Duponchel L, Lerouge P, Hausman JF, Renaut J, Hawkins S. A Cell Wall Proteome and Targeted Cell Wall Analyses Provide Novel Information on Hemicellulose Metabolism in Flax. Mol Cell Proteomics 2017; 16:1634-1651. [PMID: 28706005 PMCID: PMC5587863 DOI: 10.1074/mcp.m116.063727] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2016] [Revised: 07/10/2017] [Indexed: 12/20/2022] Open
Abstract
Experimentally-generated (nanoLC-MS/MS) proteomic analyses of four different flax organs/tissues (inner-stem, outer-stem, leaves and roots) enriched in proteins from 3 different sub-compartments (soluble-, membrane-, and cell wall-proteins) was combined with publically available data on flax seed and whole-stem proteins to generate a flax protein database containing 2996 nonredundant total proteins. Subsequent multiple analyses (MapMan, CAZy, WallProtDB and expert curation) of this database were then used to identify a flax cell wall proteome consisting of 456 nonredundant proteins localized in the cell wall and/or associated with cell wall biosynthesis, remodeling and other cell wall related processes. Examination of the proteins present in different flax organs/tissues provided a detailed overview of cell wall metabolism and highlighted the importance of hemicellulose and pectin remodeling in stem tissues. Phylogenetic analyses of proteins in the cell wall proteome revealed an important paralogy in the class IIIA xyloglucan endo-transglycosylase/hydrolase (XTH) family associated with xyloglucan endo-hydrolase activity.Immunolocalisation, FT-IR microspectroscopy, and enzymatic fingerprinting indicated that flax fiber primary/S1 cell walls contained xyloglucans with typical substituted side chains as well as glucuronoxylans in much lower quantities. These results suggest a likely central role of xyloglucans and endotransglucosylase/hydrolase activity in flax fiber formation and cell wall remodeling processes.
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Affiliation(s)
- Malika Chabi
- From the ‡Université Lille, CNRS, UMR 8576, UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F 59000 Lille, France
| | - Estelle Goulas
- From the ‡Université Lille, CNRS, UMR 8576, UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F 59000 Lille, France
| | - Celine C Leclercq
- §Department Environmental Research and Innovation (ERIN), Luxembourg Institute of Science and Technology (LIST), L-4422 Belvaux, Luxembourg
| | - Isabelle de Waele
- **Université Lille, CNRS, UMR 8516, Laboratoire de Spectrochimie Infrarouge et Raman, F 59655 Villeneuve d'Ascq, France
| | - Christophe Rihouey
- ‖Laboratoire Polymère Biopolymère Surface, UMR6270 CNRS, Institut de Recherche et d'Innovation Biomédicale, Normandie Université, Mont-Saint-Aignan, France
| | - Ugo Cenci
- ‡‡Department of Biochemistry and Molecular Biology and Centre for Comparative Genomics and Evolutionary Bioinformatics Dalhousie University, Halifax, Canada
| | - Arnaud Day
- From the ‡Université Lille, CNRS, UMR 8576, UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F 59000 Lille, France
| | - Anne-Sophie Blervacq
- From the ‡Université Lille, CNRS, UMR 8576, UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F 59000 Lille, France
| | - Godfrey Neutelings
- From the ‡Université Lille, CNRS, UMR 8576, UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F 59000 Lille, France
| | - Ludovic Duponchel
- **Université Lille, CNRS, UMR 8516, Laboratoire de Spectrochimie Infrarouge et Raman, F 59655 Villeneuve d'Ascq, France
| | - Patrice Lerouge
- ¶Laboratoire Glyco-MEV EA 4358, Institut de Recherche et d'Innovation Biomédicale, Normandie Université, Mont-Saint-Aignan, France
| | - Jean-François Hausman
- §Department Environmental Research and Innovation (ERIN), Luxembourg Institute of Science and Technology (LIST), L-4422 Belvaux, Luxembourg
| | - Jenny Renaut
- §Department Environmental Research and Innovation (ERIN), Luxembourg Institute of Science and Technology (LIST), L-4422 Belvaux, Luxembourg
| | - Simon Hawkins
- From the ‡Université Lille, CNRS, UMR 8576, UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F 59000 Lille, France;
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Mokshina N, Gorshkov O, Ibragimova N, Chernova T, Gorshkova T. Cellulosic fibres of flax recruit both primary and secondary cell wall cellulose synthases during deposition of thick tertiary cell walls and in the course of graviresponse. FUNCTIONAL PLANT BIOLOGY : FPB 2017; 44:820-831. [PMID: 32480610 DOI: 10.1071/fp17105] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2016] [Accepted: 05/19/2017] [Indexed: 05/13/2023]
Abstract
Cellulose synthesising complex consists of cellulose synthase (CESA) subunits encoded by a multigene family; different sets of CESA genes are known to be expressed during primary and secondary cell wall formation. We examined the expression of LusCESAs in flax (Linum usitatissimum L.) cellulosic fibres at various stages of development and in the course of graviresponse by means of RNA-Seq and quantitative PCR. Transcripts for both primary and secondary cell wall-related CESAs were abundant in fibres depositing highly cellulosic tertiary cell walls. Gravistimulation of flax plants temporally increased the abundance of CESA transcripts, specifically in phloem fibres located at the pulling stem side. Construction of coexpression networks for LusCESAs revealed that both primary and secondary cell wall-related CESAs were involved in the joint coexpression group in fibres depositing tertiary cell walls, as distinct from other tissues, where these genes were within separate groups. The obtained data suggest that fibres depositing tertiary cell walls have a specific mechanism of cellulose biosynthesis and a specific way of its regulation.
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Affiliation(s)
- Natalia Mokshina
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, Russia 420111
| | - Oleg Gorshkov
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, Russia 420111
| | - Nadezda Ibragimova
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, Russia 420111
| | - Tatyana Chernova
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, Russia 420111
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics of Kazan Scientific Centre of the Russian Academy of Sciences, Lobachevsky str., 2/31, Kazan, Russia 420111
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Extraction of High Quality RNA from Cannabis sativa Bast Fibres: A Vademecum for Molecular Biologists. FIBERS 2016. [DOI: 10.3390/fib4030023] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Gea G, Kjell S, Jean-François H. Integrated -omics: a powerful approach to understanding the heterogeneous lignification of fibre crops. Int J Mol Sci 2013; 14:10958-78. [PMID: 23708098 PMCID: PMC3709712 DOI: 10.3390/ijms140610958] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2013] [Revised: 05/15/2013] [Accepted: 05/17/2013] [Indexed: 12/15/2022] Open
Abstract
Lignin and cellulose represent the two main components of plant secondary walls and the most abundant polymers on Earth. Quantitatively one of the principal products of the phenylpropanoid pathway, lignin confers high mechanical strength and hydrophobicity to plant walls, thus enabling erect growth and high-pressure water transport in the vessels. Lignin is characterized by a high natural heterogeneity in its composition and abundance in plant secondary cell walls, even in the different tissues of the same plant. A typical example is the stem of fibre crops, which shows a lignified core enveloped by a cellulosic, lignin-poor cortex. Despite the great value of fibre crops for humanity, however, still little is known on the mechanisms controlling their cell wall biogenesis, and particularly, what regulates their spatially-defined lignification pattern. Given the chemical complexity and the heterogeneous composition of fibre crops' secondary walls, only the use of multidisciplinary approaches can convey an integrated picture and provide exhaustive information covering different levels of biological complexity. The present review highlights the importance of combining high throughput -omics approaches to get a complete understanding of the factors regulating the lignification heterogeneity typical of fibre crops.
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Affiliation(s)
- Guerriero Gea
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
| | - Sergeant Kjell
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
| | - Hausman Jean-François
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
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Day A, Fénart S, Neutelings G, Hawkins S, Rolando C, Tokarski C. Identification of cell wall proteins in the flax (Linum usitatissimum
) stem. Proteomics 2013; 13:812-25. [DOI: 10.1002/pmic.201200257] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2012] [Revised: 10/08/2012] [Accepted: 11/14/2012] [Indexed: 11/12/2022]
Affiliation(s)
- Arnaud Day
- Université de Lille 1 Sciences et Technologies and Protéomique; Modifications Post-traductionnelles et Glycobiologie IFR 147, Villeneuve d'Ascq France
- Stress Abiotiques et Différenciation des Végétaux Cultivés (SADV); INRA UMR 1281, Villeneuve d'Ascq France
| | - Stéphane Fénart
- Université de Lille 1 Sciences et Technologies and Protéomique; Modifications Post-traductionnelles et Glycobiologie IFR 147, Villeneuve d'Ascq France
- Stress Abiotiques et Différenciation des Végétaux Cultivés (SADV); INRA UMR 1281, Villeneuve d'Ascq France
| | - Godfrey Neutelings
- Université de Lille 1 Sciences et Technologies and Protéomique; Modifications Post-traductionnelles et Glycobiologie IFR 147, Villeneuve d'Ascq France
- Stress Abiotiques et Différenciation des Végétaux Cultivés (SADV); INRA UMR 1281, Villeneuve d'Ascq France
| | - Simon Hawkins
- Université de Lille 1 Sciences et Technologies and Protéomique; Modifications Post-traductionnelles et Glycobiologie IFR 147, Villeneuve d'Ascq France
- Stress Abiotiques et Différenciation des Végétaux Cultivés (SADV); INRA UMR 1281, Villeneuve d'Ascq France
| | - Christian Rolando
- Université de Lille 1 Sciences et Technologies and Protéomique; Modifications Post-traductionnelles et Glycobiologie IFR 147, Villeneuve d'Ascq France
- Miniaturisation pour la Synthèse, l'Analyse & la Protéomique (MSAP); USR CNRS 3290; Villeneuve d'Ascq; France
| | - Caroline Tokarski
- Université de Lille 1 Sciences et Technologies and Protéomique; Modifications Post-traductionnelles et Glycobiologie IFR 147, Villeneuve d'Ascq France
- Miniaturisation pour la Synthèse, l'Analyse & la Protéomique (MSAP); USR CNRS 3290; Villeneuve d'Ascq; France
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