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Obermayer G, Afonyushkin T, Göderle L, Puhm F, Schrottmaier W, Taqi S, Schwameis M, Ay C, Pabinger I, Jilma B, Assinger A, Mackman N, Binder CJ. Natural IgM antibodies inhibit microvesicle-driven coagulation and thrombosis. Blood 2021; 137:1406-1415. [PMID: 33512411 DOI: 10.1182/blood.2020007155] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Accepted: 12/03/2020] [Indexed: 12/14/2022] Open
Abstract
Thrombosis and its associated complications are a major cause of morbidity and mortality worldwide. Microvesicles (MVs), a class of extracellular vesicles, are increasingly recognized as mediators of coagulation and biomarkers of thrombotic risk. Thus, identifying factors targeting MV-driven coagulation may help in the development of novel antithrombotic treatments. We have previously identified a subset of circulating MVs that is characterized by the presence of oxidation-specific epitopes and bound by natural immunoglobulin M (IgM) antibodies targeting these structures. This study investigated whether natural IgM antibodies, which are known to have important anti-inflammatory housekeeping functions, inhibit the procoagulatory properties of MVs. We found that the extent of plasma coagulation is inversely associated with the levels of both free and MV-bound endogenous IgM. Moreover, the oxidation epitope-specific natural IgM antibody LR04, which recognizes malondialdehyde adducts, reduced MV-dependent plasmatic coagulation and whole blood clotting without affecting thrombocyte aggregation. Intravenous injection of LR04 protected mice from MV-induced pulmonary thrombosis. Of note, LR04 competed the binding of coagulation factor X/Xa to MVs, providing a mechanistic explanation for its anticoagulatory effect. Thus, our data identify natural IgM antibodies as hitherto unknown modulators of MV-induced coagulation in vitro and in vivo and their prognostic and therapeutic potential in the management of thrombosis.
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Affiliation(s)
- Georg Obermayer
- Department of Laboratory Medicine, Medical University of Vienna, Vienna, Austria
- Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria
| | - Taras Afonyushkin
- Department of Laboratory Medicine, Medical University of Vienna, Vienna, Austria
- Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria
| | - Laura Göderle
- Department of Laboratory Medicine, Medical University of Vienna, Vienna, Austria
| | - Florian Puhm
- Department of Laboratory Medicine, Medical University of Vienna, Vienna, Austria
- Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria
| | | | - Soreen Taqi
- Department of Laboratory Medicine, Medical University of Vienna, Vienna, Austria
| | - Michael Schwameis
- Department of Clinical Pharmacology
- Department of Emergency Medicine, and
| | - Cihan Ay
- Clinical Division of Hematology and Hemostaseology, Department of Medicine I, Medical University of Vienna, Vienna, Austria
- Department of Medicine, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC
| | - Ingrid Pabinger
- Clinical Division of Hematology and Hemostaseology, Department of Medicine I, Medical University of Vienna, Vienna, Austria
| | | | | | - Nigel Mackman
- Department of Medicine, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC
| | - Christoph J Binder
- Department of Laboratory Medicine, Medical University of Vienna, Vienna, Austria
- Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria
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Shtam T, Evtushenko V, Samsonov R, Zabrodskaya Y, Kamyshinsky R, Zabegina L, Verlov N, Burdakov V, Garaeva L, Slyusarenko M, Nikiforova N, Konevega A, Malek A. Evaluation of immune and chemical precipitation methods for plasma exosome isolation. PLoS One 2020; 15:e0242732. [PMID: 33232386 PMCID: PMC7685508 DOI: 10.1371/journal.pone.0242732] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Accepted: 11/06/2020] [Indexed: 01/08/2023] Open
Abstract
Exosomes are a type of extracellular vesicles (EVs) secreted by multiple mammalian cell types and involved in intercellular communication. Numerous studies have explored the diagnostic and therapeutic potential of exosomes. The key challenge is the lack of efficient and standard techniques for isolation and downstream analysis of nanovesicles. Conventional isolation methods, such as ultracentrifugation, precipitation, filtration, chromatography, and immune-affinity-based approaches, rely on specific physical properties or on surface biomarkers. However, any of the existing methods has its limitations. Various parameters, such as efficacy, specificity, labor input, cost and scalability, and standardization options, must be considered for the correct choice of appropriate approach. The isolation of exosomes from biological fluids is especially challenged by the complex nature and variability of these liquids. Here, we present a comparison of five protocols for exosome isolation from human plasma: two chemical affinity precipitation methods (lectin-based purification and SubX™ technology), immunoaffinity precipitation, and reference ultracentrifugation-based exosome isolation method in two modifications. An approach for the isolation of exosomes based on the phenomenon of binding and aggregation of these particles via clusters of outer membrane phosphate groups in the presence of SubX™ molecules has been put forward in the present study. The isolated EVs were characterized based upon size, quantity, and protein content.
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Affiliation(s)
- Tatiana Shtam
- Petersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", Gatchina, Russia
- N.N. Petrov National Medical Research Center of Oncology, St. Petersburg, Russia
- National Research Center “Kurchatov Institute”, Moscow, Russia
- * E-mail: (TS); (AM)
| | - Vladimir Evtushenko
- Russian Scientific Center of Radiology and Surgical Technologies named by academician A.M. Granov, St. Petersburg, Russia
| | - Roman Samsonov
- N.N. Petrov National Medical Research Center of Oncology, St. Petersburg, Russia
- Russian Scientific Center of Radiology and Surgical Technologies named by academician A.M. Granov, St. Petersburg, Russia
| | - Yana Zabrodskaya
- Petersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", Gatchina, Russia
- National Research Center “Kurchatov Institute”, Moscow, Russia
- Peter the Great St. Petersburg Polytechnic University, St. Petersburg, Russia
| | - Roman Kamyshinsky
- National Research Center “Kurchatov Institute”, Moscow, Russia
- Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics” of Russian Academy of Sciences, Moscow, Russia
| | - Lidia Zabegina
- N.N. Petrov National Medical Research Center of Oncology, St. Petersburg, Russia
- Peter the Great St. Petersburg Polytechnic University, St. Petersburg, Russia
- Ltd Oncosystem, Skolkovo Innovation Center, Moscow, Russia
| | - Nikolay Verlov
- Petersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", Gatchina, Russia
- National Research Center “Kurchatov Institute”, Moscow, Russia
| | - Vladimir Burdakov
- Petersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", Gatchina, Russia
- National Research Center “Kurchatov Institute”, Moscow, Russia
| | - Luiza Garaeva
- Petersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", Gatchina, Russia
- National Research Center “Kurchatov Institute”, Moscow, Russia
- Peter the Great St. Petersburg Polytechnic University, St. Petersburg, Russia
| | - Maria Slyusarenko
- N.N. Petrov National Medical Research Center of Oncology, St. Petersburg, Russia
- Ltd Oncosystem, Skolkovo Innovation Center, Moscow, Russia
| | - Nadezhda Nikiforova
- N.N. Petrov National Medical Research Center of Oncology, St. Petersburg, Russia
- Ltd Oncosystem, Skolkovo Innovation Center, Moscow, Russia
| | - Andrey Konevega
- Petersburg Nuclear Physics Institute named by B.P. Konstantinov of National Research Center "Kurchatov Institute", Gatchina, Russia
- National Research Center “Kurchatov Institute”, Moscow, Russia
- Peter the Great St. Petersburg Polytechnic University, St. Petersburg, Russia
| | - Anastasia Malek
- N.N. Petrov National Medical Research Center of Oncology, St. Petersburg, Russia
- Ltd Oncosystem, Skolkovo Innovation Center, Moscow, Russia
- * E-mail: (TS); (AM)
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Shtam TA, Samsonov RA, Volnitskiy AV, Kamyshinsky RA, Verlov NA, Kniazeva MS, Korobkina EA, Orehov AS, Vasiliev AL, Konevega AL, Malek AV. [Isolation of extracellular micro-vesicles from cell culture medium: comparative evaluation of methods]. BIOMEDIT︠S︡INSKAI︠A︡ KHIMII︠A︡ 2019; 64:23-30. [PMID: 29460831 DOI: 10.18097/pbmc20186401023] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Extracellular vesicles (EV) are secreted by cells of multicellular organisms. EV mediate specific mode of intercellular communication by "horizontal" exchange of substances and information. This phenomenon seems to have an essential biological significance and became a subject of intensive research. Biogenesis, structural and functional features of the EV is being commonly studies in in vitro condition. Several methods of EV isolation from cell culture medium are established, however selection of method might influence on obtained results. The choice of the optimal method depends usually from the amount of medium and the aims of the research while is still challenging issue. We performed a comparative analysis of four different methods of EV isolation from cell culture medium: differential ultracentrifugation, ultracentrifugation with a 30% sucrose/D2O "cushion", precipitation with plant proteins and immune-affinity capturing. EV isolated by different approaches were compared in terms of following parameters: size, concentration, morphology of EV, contamination by non-vesicular particles, content of exosomal tetraspanins on the EV surface, content of total proteins, RNA, and several glioma-associated miRNAs. Applied methods included nano-patricle tracking analysis (NTA), dynamic light scattering (DLS), cryo-electron microscopy, flow cytometry and RT-qPCR. On the base of obtained results, we developed practical recommendations that may help researchers to make a best choice of EV isolation method.
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Affiliation(s)
- T A Shtam
- Petersburg Nuclear Physics Institute of National Research Centre "Kurchatov Institute", Saint-Petersburg, Gatchina, Russia; Oncosystem" Ltd., Skolkovo, Russia; N.N.Petrov National Medical Research center of Oncology, Saint-Petersburg, Russia; Peter the Great Saint-Petersburg Polytechnic University, St. Petersburg, Russia
| | - R A Samsonov
- Oncosystem" Ltd., Skolkovo, Russia; N.N.Petrov National Medical Research center of Oncology, Saint-Petersburg, Russia
| | - A V Volnitskiy
- Petersburg Nuclear Physics Institute of National Research Centre "Kurchatov Institute", Saint-Petersburg, Gatchina, Russia
| | - R A Kamyshinsky
- National Research Center "Kurchatov Institute", Moscow, Russia
| | - N A Verlov
- Petersburg Nuclear Physics Institute of National Research Centre "Kurchatov Institute", Saint-Petersburg, Gatchina, Russia
| | - M S Kniazeva
- Peter the Great Saint-Petersburg Polytechnic University, St. Petersburg, Russia
| | - E A Korobkina
- Peter the Great Saint-Petersburg Polytechnic University, St. Petersburg, Russia
| | - A S Orehov
- National Research Center "Kurchatov Institute", Moscow, Russia
| | - A L Vasiliev
- National Research Center "Kurchatov Institute", Moscow, Russia
| | - A L Konevega
- Petersburg Nuclear Physics Institute of National Research Centre "Kurchatov Institute", Saint-Petersburg, Gatchina, Russia; Peter the Great Saint-Petersburg Polytechnic University, St. Petersburg, Russia
| | - A V Malek
- Oncosystem" Ltd., Skolkovo, Russia; N.N.Petrov National Medical Research center of Oncology, Saint-Petersburg, Russia
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Sheveleva ON, Domaratskaya EI, Payushina OV. Extracellular Vesicles and Prospects of Their Use for Tissue Regeneration. BIOCHEMISTRY MOSCOW SUPPLEMENT SERIES A-MEMBRANE AND CELL BIOLOGY 2019. [DOI: 10.1134/s1990747818040104] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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Kulichkova VA, Selenina AV, Tomilin AN, Tsimokha AS. Establishment of the HeLa Cell Line with Stable Expression of CD63 Exosome Marker Fused with Fluorescent Protein TagRFP and HTBH Tag. ACTA ACUST UNITED AC 2018. [DOI: 10.1134/s1990519x18020049] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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Shtam TA, Samsonov RB, Volnitskiy AV, Kamyshinsky RA, Verlov NA, Kniazeva MS, Korobkina EA, Orehov AS, Vasiliev AL, Konevega AL, Malek AV. Isolation of Extracellular Microvesicles from Cell Culture Medium: Comparative Evaluation of Methods. BIOCHEMISTRY (MOSCOW), SUPPLEMENT SERIES B: BIOMEDICAL CHEMISTRY 2018. [DOI: 10.1134/s1990750818020117] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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