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Deshpande AS, Ramireddy S, Sudandiradoss C, Noor A, Sen P. Streptozocin; a GLUT2 binding drug, interacts with human serum albumin at loci h6 DOM3-h7 DOM3. Int J Biol Macromol 2019; 128:923-933. [PMID: 30716368 DOI: 10.1016/j.ijbiomac.2019.01.217] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2018] [Revised: 01/31/2019] [Accepted: 01/31/2019] [Indexed: 02/06/2023]
Abstract
Streptozocin (STZ) is a broad range antibiotic, highly genotoxic, antineoplastic and hyperglycemic. HSA is the most abundant protein in physiology and it binds to almost all exogenic and endogenic ligands, including drugs. STZ-induced fluorescence quenching of HSA has been done at pH 7.4, pH 3.5 and at pH 7.4 with 4.5 M urea at temperatures 286 K, 291 K, and 306 K. Ksv found to be 103 M-1, binding constant 1.5X103M-1 and binding sites ~1. But, Ksv for HSA and glucopyranose interaction was found lesser than that of HSA-STZ binding. Binding of STZ/glucopyranose on HSA seems to result in complex formation as calculated Kq > 1010 M-1 s-1. The number of binding sites, binding constants, and binding energies were increased with temperature. The ΔG0, ΔH0, and ΔS0 for HSA-STZ interaction were found to be -17.7 × 103 J·mol-1; 2.34 × 105 J·mol-1 and 841 JK-1 mol-1 respectively at pH 7.4 and 291 K. The comparative bindings of N, F and I states of HSA with STZ and their molecular docking analyses indicate that IIIA-B junction (i.e., inter-helix h6DOM3-h7DOM3) is the probable binding site, a locus close to fatty acid binding site-5. These results could be useful for therapeutic and analytical exploitation of STZ, as albumin used as the vehicle for drug delivery.
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Affiliation(s)
- Amogh S Deshpande
- Department of Biotechnology, School of Bioscience and Technology, Vellore Institute of Technology, Vellore 632014, India
| | - Sriroopreddy Ramireddy
- Department of Biotechnology, School of Bioscience and Technology, Vellore Institute of Technology, Vellore 632014, India
| | - C Sudandiradoss
- Department of Biotechnology, School of Bioscience and Technology, Vellore Institute of Technology, Vellore 632014, India
| | - Ayesha Noor
- Centre for Bioseparation Technology, Vellore Institute of Technology, Vellore 632014, India
| | - Priyankar Sen
- Centre for Bioseparation Technology, Vellore Institute of Technology, Vellore 632014, India.
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Fonin AV, Golikova AD, Zvereva IA, D'Auria S, Staiano M, Uversky VN, Kuznetsova IM, Turoverov KK. Osmolyte-Like Stabilizing Effects of Low GdnHCl Concentrations on d-Glucose/d-Galactose-Binding Protein. Int J Mol Sci 2017; 18:E2008. [PMID: 28925982 PMCID: PMC5618657 DOI: 10.3390/ijms18092008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2017] [Revised: 09/14/2017] [Accepted: 09/16/2017] [Indexed: 11/16/2022] Open
Abstract
The ability of d-glucose/d-galactose-binding protein (GGBP) to reversibly interact with its ligands, glucose and galactose, makes this protein an attractive candidate for sensing elements of glucose biosensors. This potential is largely responsible for attracting researchers to study the conformational properties of this protein. Previously, we showed that an increase in the fluorescence intensity of the fluorescent dye 6-bromoacetyl-2-dimetylaminonaphtalene (BADAN) is linked to the holo-form of the GGBP/H152C mutant in solutions containing sub-denaturing concentrations of guanidine hydrochloride (GdnHCl). It was hypothesized that low GdnHCl concentrations might lead to compaction of the protein, thereby facilitating ligand binding. In this work, we utilize BADAN fluorescence spectroscopy, intrinsic protein UV fluorescence spectroscopy, and isothermal titration calorimetry (ITC) to show that the sub-denaturing GdnHCl concentrations possess osmolyte-like stabilizing effects on the structural dynamics, conformational stability, and functional activity of GGBP/H152C and the wild type of this protein (wtGGBP). Our data are consistent with the model where low GdnHCl concentrations promote a shift in the dynamic distribution of the protein molecules toward a conformational ensemble enriched in molecules with a tighter structure and a more closed conformation. This promotes the increase in the configurational complementarity between the protein and glucose molecules that leads to the increase in glucose affinity in both GGBP/H152C and wtGGBP.
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Affiliation(s)
- Alexander V Fonin
- Institute of Cytology of the Russian Academy of Sciences, Laboratory of Structural Dynamics, Stability and Folding of Proteins, Tikhoretsky av. 4, 194064 St. Petersburg, Russia.
| | - Alexandra D Golikova
- Saint Petersburg State University, Universitetskaya nab. 7/9, 199034 St. Petersburg, Russia.
| | - Irina A Zvereva
- Saint Petersburg State University, Universitetskaya nab. 7/9, 199034 St. Petersburg, Russia.
| | - Sabato D'Auria
- CNR, Institute of Food Science, via Roma 64, 83100 Avellino, Italy.
| | - Maria Staiano
- CNR, Institute of Food Science, via Roma 64, 83100 Avellino, Italy.
| | - Vladimir N Uversky
- Department of Molecular Medicine and Byrd Alzheimer's Research Institute, Morsani College of Medicine, University of South Florida, 12901 Bruce B. Downs Blvd., Tampa, FL 33612, USA.
| | - Irina M Kuznetsova
- Institute of Cytology of the Russian Academy of Sciences, Laboratory of Structural Dynamics, Stability and Folding of Proteins, Tikhoretsky av. 4, 194064 St. Petersburg, Russia.
| | - Konstantin K Turoverov
- Institute of Cytology of the Russian Academy of Sciences, Laboratory of Structural Dynamics, Stability and Folding of Proteins, Tikhoretsky av. 4, 194064 St. Petersburg, Russia.
- Department of Biophysics, Peter the Great St. Petersburg Polytechnic University, Polytechnicheskaya av. 29, 195251 St. Petersburg, Russia.
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Fatima S, Sen P, Sneha P, Priyadoss CG. Hydrophobic Interaction Between Domain I of Albumin and B Chain of Detemir May Support Myristate-Dependent Detemir-Albumin Binding. Appl Biochem Biotechnol 2016; 182:82-96. [DOI: 10.1007/s12010-016-2312-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2016] [Accepted: 10/30/2016] [Indexed: 01/01/2023]
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Koštál V, Korbelová J, Poupardin R, Moos M, Šimek P. Arginine and proline applied as food additives stimulate high freeze tolerance in larvae of Drosophila melanogaster. J Exp Biol 2016; 219:2358-67. [DOI: 10.1242/jeb.142158] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2016] [Accepted: 05/25/2016] [Indexed: 01/18/2023]
Abstract
ABSTRACT
The fruit fly Drosophila melanogaster is an insect of tropical origin. Its larval stage is evolutionarily adapted for rapid growth and development under warm conditions and shows high sensitivity to cold. In this study, we further developed an optimal acclimation and freezing protocol that significantly improves larval freeze tolerance (an ability to survive at −5°C when most of the freezable fraction of water is converted to ice). Using the optimal protocol, freeze survival to adult stage increased from 0.7% to 12.6% in the larvae fed standard diet (agar, sugar, yeast, cornmeal). Next, we fed the larvae diets augmented with 31 different amino compounds, administered in different concentrations, and observed their effects on larval metabolomic composition, viability, rate of development and freeze tolerance. While some diet additives were toxic, others showed positive effects on freeze tolerance. Statistical correlation revealed tight association between high freeze tolerance and high levels of amino compounds involved in arginine and proline metabolism. Proline- and arginine-augmented diets showed the highest potential, improving freeze survival to 42.1% and 50.6%, respectively. Two plausible mechanisms by which high concentrations of proline and arginine might stimulate high freeze tolerance are discussed: (i) proline, probably in combination with trehalose, could reduce partial unfolding of proteins and prevent membrane fusions in the larvae exposed to thermal stress (prior to freezing) or during freeze dehydration; (ii) both arginine and proline are exceptional among amino compounds in their ability to form supramolecular aggregates which probably bind partially unfolded proteins and inhibit their aggregation under increasing freeze dehydration.
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Affiliation(s)
- Vladimír Koštál
- Biology Centre CAS, Institute of Entomology, České Budějovice 37005, Czech Republic
| | - Jaroslava Korbelová
- Biology Centre CAS, Institute of Entomology, České Budějovice 37005, Czech Republic
| | - Rodolphe Poupardin
- Biology Centre CAS, Institute of Entomology, České Budějovice 37005, Czech Republic
| | - Martin Moos
- Biology Centre CAS, Institute of Entomology, České Budějovice 37005, Czech Republic
| | - Petr Šimek
- Biology Centre CAS, Institute of Entomology, České Budějovice 37005, Czech Republic
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Pan F, Xu T, Yang L, Jiang X, Zhang L. Probing the binding of an endocrine disrupting compound-Bisphenol F to human serum albumin: insights into the interactions of harmful chemicals with functional biomacromolecules. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 132:795-802. [PMID: 24973668 DOI: 10.1016/j.saa.2014.05.093] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2013] [Revised: 05/20/2014] [Accepted: 05/23/2014] [Indexed: 06/03/2023]
Abstract
Bisphenol F (BPF) as an endocrine disrupting compounds (EDCs) pollutant in the environment poses a great threat to human health. To evaluate the toxicity of BPF at the protein level, the effects of BPF on human serum albumin (HSA) were investigated at three temperatures 283, 298, and 308 K by multiple spectroscopic techniques. The experimental results showed that BPF effectively quenched the intrinsic fluorescence of HSA via static quenching. The number of binding sites, the binding constant, the thermodynamic parameters and the binding subdomain were measured, and indicated that BPF could spontaneously bind with HSA on subdomain IIA through H-bond and van der Waals interactions. Furthermore, the conformation of HSA was demonstrably changed in the presence of BPF. The work provides accurate and full basic data for clarifying the binding mechanisms of BPF with HSA in vivo and is helpful for understanding its effect on protein function during its transportation and distribution in blood.
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Affiliation(s)
- Fang Pan
- College of Chemistry, Liaoning University, 66 Chongshan Middle Road, Shenyang 110036, People's Republic of China
| | - Tianci Xu
- Liaoning Environmental Monitoring & Experiment Center, 30A-3 Shuangyuan Road, Shenyang 110161, People's Republic of China
| | - Lijun Yang
- College of Chemistry, Liaoning University, 66 Chongshan Middle Road, Shenyang 110036, People's Republic of China
| | - Xiaoqing Jiang
- College of Chemistry, Liaoning University, 66 Chongshan Middle Road, Shenyang 110036, People's Republic of China
| | - Lei Zhang
- College of Chemistry, Liaoning University, 66 Chongshan Middle Road, Shenyang 110036, People's Republic of China.
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