The influence of diet on the microbiota of live-feed rotifers (Brachionus plicatilis) used in commercial fish larviculture

Live-feed is indispensable to commercial fish larviculture. However, high bacterial loads in rotifers could pose a biosecurity risk. While this may be true, live-feed associated bacteria could also be beneficial to fish larvae through improved feed utilization or pathogen inhibition following host microbiota modification. The study objective was to elucidate the largely unexplored microbiota of rotifers propagated on five different diets through bacterial community profiling by 16S rRNA gene amplicon sequencing. Investigated rotifer samples had a median observed alpha-diversity of 338 ± 87 bacterial species. Alpha- and Gamma-Proteobacteria dominated the rotifer microbiota followed by members of classes Flavobacteriia, Cytophagia, Mollicutes, Phycisphaerae and Bacteroidia. Different diets significantly altered the bacterial communities associated with rotifers according to PERMANOVA test results and beta dispersion calculations. A common core rotifer microbiome included 31 bacterial species present in relative abundances over 0.01%. We discuss the functional role of some microbiome members. Our data suggested the presence of several known fish pathogens in stock rotifers. However, we found no evidence for increased loads of these presumptive taxa in propagated live-feed rotifers during this field trial.

Influence of cell density of Escherichia coli and the dinoflagellate Crypthecodinium cohnii on life history traits of the nematode Panagrolaimus sp. strain NFS 24-5, a potential larval food for marine aquaculture

The nematode Panagrolaimus sp. NFS 24-5 has potential for use as living food for larval shrimps and fish in marine aquaculture. The nematodes are usually produced on bacterial or yeast cells. Nematodes cannot synthesise the long chain fatty acid docosahexaenoic acid (DHA) which is essential for feeding marine aquaculture organisms. The eukaryotic, heterotrophic dinoflagellate Crypthecodinium cohnii consists of approximately 20% DHA. To culture the nematodes and simultaneously enrich them with DHA, single adult male and female individuals were cultured in hanging drops with variable cell density of C. cohnii. Life history traits, such as net reproductive rate (), population doubling time (PDT) and intrinsic rate of natural increase (), were assessed and compared with data obtained from cultures on Escherichia coli. A maximum was recorded at a cell density of 4 × 106 C. cohnii cells ml−1, corresponding to 2478.82 μg dry mass ml−1. The same was achieved with 7× lower biomass of E. coli at a cell density of 3 × 109 cells ml−1, corresponding to 335.63 μg dry mass ml−1. The results exclude the use of the dinoflagellate culture from application in mass production of the nematode for aquaculture food and limit the use to post-harvest enrichment of the nematodes with essential fatty acids. At a density of 3 × 109 E. coli cells ml−1 the PDT was lowest and the was highest, indicating that this cell density might be closest to optimum conditions for nematode reproduction. Exceeding this cell density yielded fewer offspring within a longer time period. Implications for mass production in monoxenic liquid cultures are discussed.

Monoxenic liquid culture with Escherichia coli of the free-living nematode Panagrolaimus sp. (strain NFS 24-5), a potential live food candidate for marine fish and shrimp larvae

The free-living, bacterial-feeding nematode Panagrolaimus sp. (strain NFS 24-5) has potential for use as live food for marine shrimp and fish larvae. Mass production in liquid culture is a prerequisite for its commercial exploitation. Panagrolaimus sp. was propagated in monoxenic liquid culture on Escherichia coli and parameters, like nematode density, population dynamics and biomass were recorded and compared with life history table data. A mean maximum nematode density of 174,278 mL(-1) and a maximum of 251,000 mL(-1) were recorded on day 17 after inoculation. Highest average biomass was 40 g L(-1) at day 13. The comparison with life history table data indicated that the hypothetical potential of liquid culture is much higher than documented during this investigation. Nematode development is delayed in liquid culture and egg production per female is more than five times lower than reported from life history trait analysis. The latter assessed a nematode generation time of 7.1 days, whereas the process time at maximum nematode density in liquid culture was 16 days indicating that a reduction of the process time can be achieved by further investigating the influence of nematode inoculum density on population development. The results challenge future research to reduce process time and variability and improve population dynamics also during scale-up of the liquid culture process.