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Berthiol F, Boissieras J, Bonnet H, Pierrot M, Philouze C, Poisson JF, Granzhan A, Dejeu J, Defrancq E. Novel Synthesis of IMC-48 and Affinity Evaluation with Different i-Motif DNA Sequences. Molecules 2023; 28:molecules28020682. [PMID: 36677740 PMCID: PMC9865601 DOI: 10.3390/molecules28020682] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Revised: 01/04/2023] [Accepted: 01/05/2023] [Indexed: 01/12/2023] Open
Abstract
During the last decade, the evidence for the biological relevance of i-motif DNA (i-DNA) has been accumulated. However, relatively few molecules were reported to interact with i-DNA, and a controversy concerning their binding mode, affinity, and selectivity persists in the literature. In this context, the cholestane derivative IMC-48 has been reported to modulate bcl-2 gene expression by stabilizing an i-motif structure in its promoter. In the present contribution, we report on a novel, more straightforward, synthesis of IMC-48 requiring fewer steps compared to the previous approach. Furthermore, the interaction of IMC-48 with four different i-motif DNA sequences was thoroughly investigated by bio-layer interferometry (BLI) and circular dichroism (CD) spectroscopy. Surprisingly, our results show that IMC-48 is a very weak ligand of i-DNA as no quantifiable interaction or significant stabilization of i-motif structures could be observed, stimulating a quest for an alternative mechanism of its biological activity.
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Affiliation(s)
- Florian Berthiol
- Department of Molecular Chemistry (DCM), CNRS, UMR 5250, Université Grenoble-Alpes, 38000 Grenoble, France
- Correspondence: (F.B.); (J.D.); (E.D.)
| | - Joseph Boissieras
- CNRS UMR9187, INSERM U1196, Institut Curie, PSL Research University, F-91405 Orsay, France
- CNRS UMR9187, INSERM U1196, Université Paris Saclay, F-91405 Orsay, France
| | - Hugues Bonnet
- Department of Molecular Chemistry (DCM), CNRS, UMR 5250, Université Grenoble-Alpes, 38000 Grenoble, France
| | - Marie Pierrot
- Department of Molecular Chemistry (DCM), CNRS, UMR 5250, Université Grenoble-Alpes, 38000 Grenoble, France
| | - Christian Philouze
- Department of Molecular Chemistry (DCM), CNRS, UMR 5250, Université Grenoble-Alpes, 38000 Grenoble, France
| | - Jean-François Poisson
- Department of Molecular Chemistry (DCM), CNRS, UMR 5250, Université Grenoble-Alpes, 38000 Grenoble, France
| | - Anton Granzhan
- CNRS UMR9187, INSERM U1196, Institut Curie, PSL Research University, F-91405 Orsay, France
- CNRS UMR9187, INSERM U1196, Université Paris Saclay, F-91405 Orsay, France
| | - Jérôme Dejeu
- Department of Molecular Chemistry (DCM), CNRS, UMR 5250, Université Grenoble-Alpes, 38000 Grenoble, France
- FEMTO-ST Institute, CNRS UMR-6174, Université de Bourgogne Franche-Comté, F-25000 Besançon, France
- Correspondence: (F.B.); (J.D.); (E.D.)
| | - Eric Defrancq
- Department of Molecular Chemistry (DCM), CNRS, UMR 5250, Université Grenoble-Alpes, 38000 Grenoble, France
- Correspondence: (F.B.); (J.D.); (E.D.)
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Yao W, Zhang Y, Zhu H, Ge C, Wang D. The synthesis and structure of pyridine-oxadiazole iridium complexes and catalytic applications: Non-coordinating-anion-tuned selective C N bond formation. CHINESE CHEM LETT 2020. [DOI: 10.1016/j.cclet.2019.08.049] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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Yao W, Duan Z, Zhang Y, Sang X, Xia X, Wang D. Iridium Supported on Phosphorus‐Doped Porous Organic Polymers: Active and Recyclable Catalyst for Acceptorless Dehydrogenation and Borrowing Hydrogen Reaction. Adv Synth Catal 2019. [DOI: 10.1002/adsc.201900929] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Wei Yao
- Key Laboratory of Synthetic and Biological Colloids, Ministry of Education, School of Chemical and Material EngineeringJiangnan University Wuxi 214122 People's Republic of China
| | - Zheng‐Chao Duan
- Key Laboratory of Synthetic and Biological Colloids, Ministry of Education, School of Chemical and Material EngineeringJiangnan University Wuxi 214122 People's Republic of China
- School of Chemical and Environmental EngineeringHubei Minzu University Enshi 445000 People's Republic of China
| | - Yilin Zhang
- C. Eugene Bennett Department of ChemistryWest Virginia University Morgantown, West Virginia 26506 USA
| | - Xinxin Sang
- Key Laboratory of Synthetic and Biological Colloids, Ministry of Education, School of Chemical and Material EngineeringJiangnan University Wuxi 214122 People's Republic of China
| | - Xiao‐Feng Xia
- Key Laboratory of Synthetic and Biological Colloids, Ministry of Education, School of Chemical and Material EngineeringJiangnan University Wuxi 214122 People's Republic of China
| | - Dawei Wang
- Key Laboratory of Synthetic and Biological Colloids, Ministry of Education, School of Chemical and Material EngineeringJiangnan University Wuxi 214122 People's Republic of China
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Ghorbani-Vaghei R, Mahmoodi J, Maghbooli Y. Preparation and characterization of nanomagnetic piperidinium benzene-1,3-disulfonate ionic liquid as a novel, green and heterogeneous catalyst and its use in the synthesis of 1H-pyrazolo[1,2-b]phthalazine-5,10-diones and 1H-pyrazolo[1,2-a] pyridazine-5,8. Appl Organomet Chem 2017. [DOI: 10.1002/aoc.3717] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | - Jafar Mahmoodi
- Faculty of Chemistry; Bu-Ali Sina University; Hamedan 6517838683 Iran
| | - Yaser Maghbooli
- Faculty of Chemistry; Bu-Ali Sina University; Hamedan 6517838683 Iran
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Tayebee R, Maleki B, Zonoz FM, Kakhki RM, Kunani T. Mild, efficient, and environmentally friendly synthesis of symmetrical N,N′-alkylidenebisamides under solvent-free conditions catalyzed by H7[(P2W17O61)FeIII(H2O)]. RSC Adv 2016. [DOI: 10.1039/c6ra01811d] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
H7[(P2W17O61)FeIII(H2O)] is introduced as an effective catalyst for the one-pot synthesis ofN,N′-alkylidenebisamides. The catalyst could be easily separated without noticeable reduction in activity.
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Affiliation(s)
- R. Tayebee
- Department of Chemistry
- School of Sciences
- Hakim Sabzevari University
- Sabzevar
- Iran
| | - B. Maleki
- Department of Chemistry
- School of Sciences
- Hakim Sabzevari University
- Sabzevar
- Iran
| | - F. M. Zonoz
- Department of Chemistry
- School of Sciences
- Hakim Sabzevari University
- Sabzevar
- Iran
| | - R. M. Kakhki
- Department of Chemistry
- Faculty of Sciences
- University of Gonabad
- Gonabad
- Iran
| | - T. Kunani
- Department of Chemistry
- School of Sciences
- Hakim Sabzevari University
- Sabzevar
- Iran
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Mohammad Shafiee MR. Silica-supported barium chloride (SiO2–BaCl2) — Efficient and heterogeneous catalyst for the environmentally friendly preparation of N,N′-alkylidene bisamides under solvent-free conditions. CAN J CHEM 2011. [DOI: 10.1139/v11-007] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A series of N,N′-alkylidene bisamides were prepared via a green and environmentally friendly synthetic protocol from the reaction of phenyl acetylene or hex-1-yne, aromatic aldehyde, and benzamide or acetamide. Silica-supported barium chloride (SiO2–BaCl2) catalyzes the process of the reaction. The prepared catalysts were characterized by X-ray diffraction, and the products were obtained with high conversions and yields.
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Shaterian HR, Doostmohammadi R, Khorami F, Ghashang M. Magnesium Hydrogensulfate [Mg(HSO4)2] as an Efficient Catalyst for the Preparation of Silyl Ethers, Dibenzo[a,j]xanthenes, and Octahydroxanthene Derivatives. PHOSPHORUS SULFUR 2009. [DOI: 10.1080/10426500902758329] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Hamid Reza Shaterian
- a Department of Chemistry, Faculty of Sciences , University of Sistan and Baluchestan , Zahedan, Iran
| | - Razieh Doostmohammadi
- a Department of Chemistry, Faculty of Sciences , University of Sistan and Baluchestan , Zahedan, Iran
| | - Fahimeh Khorami
- a Department of Chemistry, Faculty of Sciences , University of Sistan and Baluchestan , Zahedan, Iran
| | - Majid Ghashang
- a Department of Chemistry, Faculty of Sciences , University of Sistan and Baluchestan , Zahedan, Iran
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Shaterian HR, Hosseinian A, Ghashang M. Silica-Supported Perchloric Acid (HClO4-SiO2): An Efficient Catalyst for the Preparation ofβ-Amido Carbonyl Compounds Using Multicomponent Reactions. SYNTHETIC COMMUN 2008. [DOI: 10.1080/00397910802218728] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Hamid Reza Shaterian
- a Department of Chemistry , Faculty of Sciences, University of Sistan and Baluchestan , Zahedan, Iran
| | - Asghar Hosseinian
- a Department of Chemistry , Faculty of Sciences, University of Sistan and Baluchestan , Zahedan, Iran
| | - Majid Ghashang
- a Department of Chemistry , Faculty of Sciences, University of Sistan and Baluchestan , Zahedan, Iran
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