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Method for Solving Difficulties in Rhythm Classification Caused by Few Samples and Similar Characteristics in Electrocardiograms. Bioengineering (Basel) 2023; 10:bioengineering10020196. [PMID: 36829690 PMCID: PMC9952353 DOI: 10.3390/bioengineering10020196] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Revised: 01/31/2023] [Accepted: 02/01/2023] [Indexed: 02/05/2023] Open
Abstract
A method for accurately analyzing electrocardiograms (ECGs), which are obtained from electrical signals generated by cardiac activity, is essential in heart disease diagnosis. However, rhythms are typically obtained with relatively few data samples and similar characteristics, making them difficult to classify. To solve these issues, we proposed a novel method that distinguishes a given ECG rhythm using a beat score map (BSM) image. Through the proposed method, the associations between beats and previously used features, such as the R-R interval, were considered. Rhythm classification was implemented by training a convolutional neural network model and using transfer learning with the created BSM image. As a result, the proposed method for ECG rhythms with small data samples showed significant results. It also showed good performance in differentiating atrial fibrillation (AFIB) and atrial flutter (AFL) rhythms, which are difficult to distinguish due to their similar characteristics. The performance for rhythms with a small number of samples of the proposed method is 20% better than an existing method. In addition, the performance based on the F-1 score for classifying AFIB and AFL of the proposed method is 30% better than the existing method. This study solved the previous limitations caused by small sample numbers and similar rhythms.
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2
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Qin J, Gao F, Wang Z, Wong DC, Zhao Z, Relton SD, Fang H. A novel temporal generative adversarial network for electrocardiography anomaly detection. Artif Intell Med 2023; 136:102489. [PMID: 36710067 DOI: 10.1016/j.artmed.2023.102489] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2022] [Revised: 11/28/2022] [Accepted: 01/09/2023] [Indexed: 01/15/2023]
Abstract
Cardiac abnormality detection from Electrocardiogram (ECG) signals is a common task for cardiologists. To facilitate efficient and objective detection, automated ECG classification by using deep learning based methods have been developed in recent years. Despite their impressive performance, these methods perform poorly when presented with cardiac abnormalities that are not well represented, or absent, in the training data. To this end, we propose a novel one-class classification based ECG anomaly detection generative adversarial network (GAN). Specifically, we embedded a Bi-directional Long-Short Term Memory (Bi-LSTM) layer into a GAN architecture and used a mini-batch discrimination training strategy in the discriminator to synthesis ECG signals. Our method generates samples to match the data distribution from normal signals of healthy group so that a generalised anomaly detector can be built reliably. The experimental results demonstrate our method outperforms several state-of-the-art semi-supervised learning based ECG anomaly detection algorithms and robustly detects the unknown anomaly class in the MIT-BIH arrhythmia database. Experiments show that our method achieves the accuracy of 95.5% and AUC of 95.9% which outperforms the most competitive baseline by 0.7% and 1.7% respectively. Our method may prove to be a helpful diagnostic method for helping cardiologists identify arrhythmias.
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Affiliation(s)
- Jing Qin
- College of Software Engineering, Dalian University, Dalian, China.
| | - Fujie Gao
- College of Information Engineering, Dalian University, Dalian, China.
| | - Zumin Wang
- College of Information Engineering, Dalian University, Dalian, China.
| | - David C Wong
- Department of Computer Science and Centre for Health Informatics, University of Manchester, Manchester, UK.
| | - Zhibin Zhao
- School of Mechanical Engineering, Xi'an Jiaotong University, Xi'an, China.
| | - Samuel D Relton
- Leeds Institute of Health Sciences, University of Leeds, Leeds, UK.
| | - Hui Fang
- Department of Computer Science, Loughborough University, Loughborough, UK.
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3
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Cardiac arrhythmia classification by time–frequency features inputted to the designed convolutional neural networks. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2022.104224] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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4
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Musa N, Gital AY, Aljojo N, Chiroma H, Adewole KS, Mojeed HA, Faruk N, Abdulkarim A, Emmanuel I, Folawiyo YY, Ogunmodede JA, Oloyede AA, Olawoyin LA, Sikiru IA, Katb I. A systematic review and Meta-data analysis on the applications of Deep Learning in Electrocardiogram. JOURNAL OF AMBIENT INTELLIGENCE AND HUMANIZED COMPUTING 2022; 14:9677-9750. [PMID: 35821879 PMCID: PMC9261902 DOI: 10.1007/s12652-022-03868-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/15/2021] [Accepted: 04/26/2022] [Indexed: 06/08/2023]
Abstract
The success of deep learning over the traditional machine learning techniques in handling artificial intelligence application tasks such as image processing, computer vision, object detection, speech recognition, medical imaging and so on, has made deep learning the buzz word that dominates Artificial Intelligence applications. From the last decade, the applications of deep learning in physiological signals such as electrocardiogram (ECG) have attracted a good number of research. However, previous surveys have not been able to provide a systematic comprehensive review including biometric ECG based systems of the applications of deep learning in ECG with respect to domain of applications. To address this gap, we conducted a systematic literature review on the applications of deep learning in ECG including biometric ECG based systems. The study analyzed systematically, 150 primary studies with evidence of the application of deep learning in ECG. The study shows that the applications of deep learning in ECG have been applied in different domains. We presented a new taxonomy of the domains of application of the deep learning in ECG. The paper also presented discussions on biometric ECG based systems and meta-data analysis of the studies based on the domain, area, task, deep learning models, dataset sources and preprocessing methods. Challenges and potential research opportunities were highlighted to enable novel research. We believe that this study will be useful to both new researchers and expert researchers who are seeking to add knowledge to the already existing body of knowledge in ECG signal processing using deep learning algorithm. Supplementary information The online version contains supplementary material available at 10.1007/s12652-022-03868-z.
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Affiliation(s)
- Nehemiah Musa
- Department of Mathematical Sciences, Abubakar Tafawa Balewa University, Bauchi, Nigeria
| | - Abdulsalam Ya’u Gital
- Department of Mathematical Sciences, Abubakar Tafawa Balewa University, Bauchi, Nigeria
| | | | - Haruna Chiroma
- Computer Science and Engineering, University of Hafr Al-Batin, Hafr, Saudi Arabia
- Computer Science and Engineering , University of Hafr Al-Batin, Hafr Al-Batin, Saudi Arabia
| | - Kayode S. Adewole
- Department of Computer Science, University of Ilorin, Ilorin, Nigeria
| | - Hammed A. Mojeed
- Department of Computer Science, University of Ilorin, Ilorin, Nigeria
| | - Nasir Faruk
- Department of Physics, Sule Lamido University, Kafin Hausa, Nigeria
| | - Abubakar Abdulkarim
- Department of Electrical Engineering, Ahmadu Bello University Zaria, Zaria, Nigeria
| | - Ifada Emmanuel
- Department of Physics, Sule Lamido University, Kafin Hausa, Nigeria
| | | | | | | | | | | | - Ibrahim Katb
- Computer Science and Engineering, University of Hafr Al-Batin, Hafr, Saudi Arabia
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5
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Yang J, Cai W, Wang M. Premature beats detection based on a novel convolutional neural network. Physiol Meas 2021; 42. [PMID: 34167103 DOI: 10.1088/1361-6579/ac0e82] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2021] [Accepted: 06/24/2021] [Indexed: 11/11/2022]
Abstract
Objective.Automatic detection of premature beats on long electrocardiogram (ECG) recordings is of great significance for clinical diagnosis. In this paper, we propose a novel deep learning model, the ECGDet, to detect premature beats, including premature ventricular contractions (PVCs) and supraventricular premature beats (SPBs) on single-lead long-term ECGs.Approach.The ECGDet is proposed based on a convolutional neural network and squeeze-and-excitation network. It outputs the probabilities that the ECG samples belong to a premature contraction. Non-max suppression was used to select the most appropriate locations for the premature beats. The ECGDet was trained and tested on the MIT-BIH arrhythmia database (MITDB) using a five-fold cross-validation approach. A novel loss calculation method was introduced in the model training process. Then it was tuned and further tested on the China Physiological Signal Challenge (2020) database (CPSCDB).Main results.The results showed that the average F1 value of PVC detection was 92.6%, while that of SPB detection was 72.2% on MITDB. The ECGDet bagged the 2nd place for PVC detection and ranked 7th place of SPB detection in the China Physiological Signal Challenge (2020).Significance.The proposed ECGDet can automatically detect premature heartbeats without manually extracting the features. This technique can be used for long-term ECG signal analysis and has potential for clinical applications.
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Affiliation(s)
- Jingying Yang
- School of Medical Instrument and Food Engineering, University of Shanghai for Science and Technology, Shanghai, People's Republic of China
| | - Wenjie Cai
- School of Medical Instrument and Food Engineering, University of Shanghai for Science and Technology, Shanghai, People's Republic of China
| | - Mingjie Wang
- Shanghai Key Laboratory of Bioactive Small Molecules, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, People's Republic of China
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Jiang M, Gu J, Li Y, Wei B, Zhang J, Wang Z, Xia L. HADLN: Hybrid Attention-Based Deep Learning Network for Automated Arrhythmia Classification. Front Physiol 2021; 12:683025. [PMID: 34290619 PMCID: PMC8289344 DOI: 10.3389/fphys.2021.683025] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Accepted: 05/27/2021] [Indexed: 11/13/2022] Open
Abstract
In recent years, with the development of artificial intelligence, deep learning model has achieved initial success in ECG data analysis, especially the detection of atrial fibrillation. In order to solve the problems of ignoring the correlation between contexts and gradient dispersion in traditional deep convolution neural network model, the hybrid attention-based deep learning network (HADLN) method is proposed to implement arrhythmia classification. The HADLN can make full use of the advantages of residual network (ResNet) and bidirectional long–short-term memory (Bi-LSTM) architecture to obtain fusion features containing local and global information and improve the interpretability of the model through the attention mechanism. The method is trained and verified by using the PhysioNet 2017 challenge dataset. Without loss of generality, the ECG signal is classified into four categories, including atrial fibrillation, noise, other, and normal signals. By combining the fusion features and the attention mechanism, the learned model has a great improvement in classification performance and certain interpretability. The experimental results show that the proposed HADLN method can achieve precision of 0.866, recall of 0.859, accuracy of 0.867, and F1-score of 0.880 on 10-fold cross-validation.
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Affiliation(s)
- Mingfeng Jiang
- School of Information Science and Technology, Zhejiang Sci-Tech University, Hangzhou, China
| | - Jiayan Gu
- School of Information Science and Technology, Zhejiang Sci-Tech University, Hangzhou, China
| | - Yang Li
- School of Information Science and Technology, Zhejiang Sci-Tech University, Hangzhou, China
| | - Bo Wei
- School of Information Science and Technology, Zhejiang Sci-Tech University, Hangzhou, China
| | - Jucheng Zhang
- Department of Clinical Engineering, The Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China
| | - Zhikang Wang
- Department of Clinical Engineering, The Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China
| | - Ling Xia
- Department of Biomedical Engineering, Zhejiang University, Hangzhou, China
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S. CV, E. R. A Novel Deep Learning based Gated Recurrent Unit with Extreme Learning Machine for Electrocardiogram (ECG) Signal Recognition. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102779] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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8
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Energy and sparse coding coefficients as sufficient measures for VEBs classification. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Automated Atrial Fibrillation Detection Based on Feature Fusion Using Discriminant Canonical Correlation Analysis. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2021; 2021:6691177. [PMID: 33897806 PMCID: PMC8052181 DOI: 10.1155/2021/6691177] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 03/05/2021] [Accepted: 03/26/2021] [Indexed: 11/17/2022]
Abstract
Atrial fibrillation (AF) is one of the most common cardiovascular diseases, with a high disability rate and mortality rate. The early detection and treatment of atrial fibrillation have great clinical significance. In this paper, a multiple feature fusion is proposed to screen out AF recordings from single lead short electrocardiogram (ECG) recordings. The proposed method uses discriminant canonical correlation analysis (DCCA) feature fusion. It fully takes intraclass correlation and interclass correlation into consideration and solves the problem of computation and information redundancy with simple series or parallel feature fusion. The DCCA integrates traditional features extracted by expert knowledge and deep learning features extracted by the residual network and gated recurrent unit network to improve the low accuracy of a single feature. Based on the Cardiology Challenge 2017 dataset, the experiments are designed to verify the effectiveness of the proposed algorithm. In the experiments, the F1 index can reach 88%. The accuracy, sensitivity, and specificity are 91.7%, 90.4%, and 93.2%, respectively.
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Panganiban EB, Paglinawan AC, Chung WY, Paa GLS. ECG diagnostic support system (EDSS): A deep learning neural network based classification system for detecting ECG abnormal rhythms from a low-powered wearable biosensors. SENSING AND BIO-SENSING RESEARCH 2021. [DOI: 10.1016/j.sbsr.2021.100398] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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A Deep-Learning Approach to ECG Classification Based on Adversarial Domain Adaptation. Healthcare (Basel) 2020; 8:healthcare8040437. [PMID: 33121038 PMCID: PMC7712364 DOI: 10.3390/healthcare8040437] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 10/23/2020] [Accepted: 10/23/2020] [Indexed: 11/16/2022] Open
Abstract
Cardiovascular disease has become one of the main diseases threatening human life and health. This disease is very common and troublesome, and the existing medical resources are scarce, so it is necessary to use a computer-aided automatic diagnosis to overcome these limitations. A computer-aided diagnostic system can automatically diagnose through an electrocardiogram (ECG) signal. This paper proposes a novel deep-learning method for ECG classification based on adversarial domain adaptation, which solves the problem of insufficient-labeled training samples, improves the phenomenon of different data distribution caused by individual differences, and enhances the classification accuracy of cross-domain ECG signals with different data distributions. The proposed method includes three modules: multi-scale feature extraction F, domain discrimination D, and classification C. The module F, constitutive of three different parallel convolution blocks, is constructed to increase the breadth of features extracted from this module. The module D is composed of three convolutional blocks and a fully connected layer, which is to solve the problem of low model layers and low-feature abstraction. In the module C, the time features and the deep-learning extraction features are concatenated on the fully connected layer to enhance feature diversity. The effectiveness of the proposed method is verified by experiments, and the classification accuracy of the experimental electrical signals reaches 92.3%.
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12
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Chen C, Hua Z, Zhang R, Liu G, Wen W. Automated arrhythmia classification based on a combination network of CNN and LSTM. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2019.101819] [Citation(s) in RCA: 85] [Impact Index Per Article: 21.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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Wang T, Lu C, Yang M, Hong F, Liu C. A hybrid method for heartbeat classification via convolutional neural networks, multilayer perceptrons and focal loss. PeerJ Comput Sci 2020; 6:e324. [PMID: 33816974 PMCID: PMC7924512 DOI: 10.7717/peerj-cs.324] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Accepted: 11/07/2020] [Indexed: 05/20/2023]
Abstract
BACKGROUND Heart arrhythmia, as one of the most important cardiovascular diseases (CVDs), has gained wide attention in the past two decades. The article proposes a hybrid method for heartbeat classification via convolutional neural networks, multilayer perceptrons and focal loss. METHODS In the method, a convolution neural network is used to extract the morphological features. The reason behind this is that the morphological characteristics of patients have inter-patient variations, which makes it difficult to accurately describe using traditional hand-craft ways. Then the extracted morphological features are combined with the RR intervals features and input into the multilayer perceptron for heartbeat classification. The RR intervals features contain the dynamic information of the heartbeat. Furthermore, considering that the heartbeat classes are imbalanced and would lead to the poor performance of minority classes, a focal loss is introduced to resolve the problem in the article. RESULTS Tested using the MIT-BIH arrhythmia database, our method achieves an overall positive predictive value of 64.68%, sensitivity of 68.55%, f1-score of 66.09%, and accuracy of 96.27%. Compared with existing works, our method significantly improves the performance of heartbeat classification. CONCLUSIONS Our method is simple yet effective, which is potentially used for personal automatic heartbeat classification in remote medical monitoring. The source code is provided on https://github.com/JackAndCole/Deep-Neural-Network-For-Heartbeat-Classification.
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Affiliation(s)
- Tao Wang
- School of Computer and Information, Hefei University of Technology, Hefei, Anhui, China
| | - Changhua Lu
- School of Computer and Information, Hefei University of Technology, Hefei, Anhui, China
| | - Mei Yang
- Beijing Huaru Technology Co., Ltd. Hefei Branch, Hefei, Anhui, China
| | - Feng Hong
- School of Computer and Information, Hefei University of Technology, Hefei, Anhui, China
| | - Chun Liu
- School of Electrical Engineering and Automation, Hefei University of Technology, Hefei, Anhui, China
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