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Number Cited by Other Article(s)
1
Sharpe DJ, Wales DJ. Nearly reducible finite Markov chains: Theory and algorithms. J Chem Phys 2021;155:140901. [PMID: 34654307 DOI: 10.1063/5.0060978] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]  Open
2
Numerical methods. ACTA ACUST UNITED AC 2019. [DOI: 10.1016/b978-0-444-64207-3.00006-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
3
Koch W, Frankcombe TJ. Basis expansion leaping: a new method to solve the time-dependent Schrödinger equation for molecular quantum dynamics. PHYSICAL REVIEW LETTERS 2013;110:263202. [PMID: 23848873 DOI: 10.1103/physrevlett.110.263202] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2012] [Revised: 02/24/2013] [Indexed: 06/02/2023]
4
Pinches SJ, da Silva G. On the Separation of Timescales in Chemically Activated Reactions. INT J CHEM KINET 2013. [DOI: 10.1002/kin.20774] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
5
Glowacki DR, Lockhart J, Blitz MA, Klippenstein SJ, Pilling MJ, Robertson SH, Seakins PW. Interception of excited vibrational quantum states by O2 in atmospheric association reactions. Science 2012;337:1066-9. [PMID: 22936771 DOI: 10.1126/science.1224106] [Citation(s) in RCA: 69] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
6
Glowacki DR, Liang CH, Morley C, Pilling MJ, Robertson SH. MESMER: An Open-Source Master Equation Solver for Multi-Energy Well Reactions. J Phys Chem A 2012;116:9545-60. [DOI: 10.1021/jp3051033] [Citation(s) in RCA: 397] [Impact Index Per Article: 33.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
7
Frankcombe TJ, Smith SC. Numerical solution methods for large, difficult kinetic master equations. Theor Chem Acc 2009. [DOI: 10.1007/s00214-009-0623-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
8
Frankcombe TJ, Smith SC. OH-Initiated Oxidation of Toluene. 2. Master Equation Simulation of Toluene Oxide Isomerization. J Phys Chem A 2007;111:3691-6. [PMID: 17489548 DOI: 10.1021/jp067113a] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
9
Frankcombe TJ, Smith SC. OH-Initiated Oxidation of Toluene. 1. Quantum Chemistry Investigation of the Reaction Path. J Phys Chem A 2007;111:3686-90. [PMID: 17489547 DOI: 10.1021/jp067112i] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
10
Ferreira AM, Bashford D. Model for Proton Transport Coupled to Protein Conformational Change:  Application to Proton Pumping in the Bacteriorhodopsin Photocycle. J Am Chem Soc 2006;128:16778-90. [PMID: 17177428 DOI: 10.1021/ja060742d] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
11
Frankcombe TJ, Smith SC. Fast, scalable master equation solution algorithms. III. Direct time propagation accelerated by a diffusion approximation preconditioned iterative solver. J Chem Phys 2003. [DOI: 10.1063/1.1628213] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
12
Frankcombe TJ, Smith SC. Fast, scalable master equation solution algorithms. IV. Lanczos iteration with diffusion approximation preconditioned iterative inversion. J Chem Phys 2003. [DOI: 10.1063/1.1628214] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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