1
|
Murakami T, Takayanagi T. Computational study of the post-transition state dynamics for the OH + CH 3OH reaction probed by photodetachment of the CH 3O -(H 2O) anion. Phys Chem Chem Phys 2024. [PMID: 38956990 DOI: 10.1039/d4cp01466a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/04/2024]
Abstract
Dissociative photodetachment dynamics simulations were conducted to study the CH3O-(H2O) → CH3O + H2O + e- reaction using classical molecular dynamics (MD) and ring-polymer molecular dynamics (RPMD) techniques on two newly formulated neutral potential energy surfaces (PES1 and PES2) by different research groups. While the dissociation dynamics exhibited similarities between classical MD and RPMD, there were noticeable differences in the fluctuation of probability densities for the internal modes due to nuclear quantum effects. Upon comparison of our findings with experimental data concerning the electron binding energy distribution and photofragment relative energy, it suggests that the potential energy landscapes of PES2 are reasonably precise. The time evolution of occupied vibrational states of the H2O photofragment is presented in this study.
Collapse
Affiliation(s)
- Tatsuhiro Murakami
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Sakura-ku, Saitama City, Saitama, 338-8570, Japan.
- Department of Materials & Life Sciences, Faculty of Science & Technology, Sophia University, 7-1 Kioicho, Chiyoda-ku, Tokyo, 102-8554, Japan
| | - Toshiyuki Takayanagi
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Sakura-ku, Saitama City, Saitama, 338-8570, Japan.
| |
Collapse
|
2
|
Sparling C, Townsend D. Tomographic reconstruction techniques optimized for velocity-map imaging applications. J Chem Phys 2022; 157:114201. [PMID: 36137806 DOI: 10.1063/5.0101789] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Examples of extracting meaningful information from image projection data using tomographic reconstruction techniques can be found in many areas of science. Within the photochemical dynamics community, tomography allows for complete three-dimensional (3D) charged particle momentum distributions to be reconstructed following a photodissociation or photoionization event. This permits highly differential velocity- and angle-resolved measurements to be made simultaneously. However, the generalized tomographic reconstruction strategies typically adopted for use with photochemical imaging-based around the Fourier-slice theorem and filtered back-projection algorithms-are not optimized for these specific types of problems. Here, we discuss pre-existing alternative strategies-namely, the simultaneous iterative reconstruction technique and Hankel Transform Reconstruction (HTR)-and introduce them in the context of velocity-map imaging applications. We demonstrate the clear advantages they afford, and how they can perform considerably better than approaches commonly adopted at present. Most notably, with HTR we can set a bound on the minimum number of projections required to reliably reconstruct 3D photoproduct distributions. This bound is significantly lower than what is currently accepted and will help make tomographic imaging far more accessible and efficient for many experimentalists working in the field of photochemical dynamics.
Collapse
Affiliation(s)
- Chris Sparling
- Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh EH14 4AS, United Kingdom
| | - Dave Townsend
- Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh EH14 4AS, United Kingdom
| |
Collapse
|
3
|
A localized view on molecular dissociation via electron-ion partial covariance. Commun Chem 2022; 5:42. [PMID: 36697752 PMCID: PMC9814695 DOI: 10.1038/s42004-022-00656-w] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Accepted: 02/21/2022] [Indexed: 02/01/2023] Open
Abstract
Inner-shell photoelectron spectroscopy provides an element-specific probe of molecular structure, as core-electron binding energies are sensitive to the chemical environment. Short-wavelength femtosecond light sources, such as Free-Electron Lasers (FELs), even enable time-resolved site-specific investigations of molecular photochemistry. Here, we study the ultraviolet photodissociation of the prototypical chiral molecule 1-iodo-2-methylbutane, probed by extreme-ultraviolet (XUV) pulses from the Free-electron LASer in Hamburg (FLASH) through the ultrafast evolution of the iodine 4d binding energy. Methodologically, we employ electron-ion partial covariance imaging as a technique to isolate otherwise elusive features in a two-dimensional photoelectron spectrum arising from different photofragmentation pathways. The experimental and theoretical results for the time-resolved electron spectra of the 4d3/2 and 4d5/2 atomic and molecular levels that are disentangled by this method provide a key step towards studying structural and chemical changes from a specific spectator site.
Collapse
|
4
|
Sparling C, Ruget A, Leach J, Townsend D. Arbitrary image reinflation: A deep learning technique for recovering 3D photoproduct distributions from a single 2D projection. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2022; 93:023303. [PMID: 35232150 DOI: 10.1063/5.0082744] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Accepted: 01/26/2022] [Indexed: 06/14/2023]
Abstract
Many charged particle imaging measurements rely on the inverse Abel transform (or related methods) to reconstruct three-dimensional (3D) photoproduct distributions from a single two-dimensional (2D) projection image. This technique allows for both energy- and angle-resolved information to be recorded in a relatively inexpensive experimental setup, and its use is now widespread within the field of photochemical dynamics. There are restrictions, however, as cylindrical symmetry constraints on the overall form of the distribution mean that it can only be used with a limited range of laser polarization geometries. The more general problem of reconstructing arbitrary 3D distributions from a single 2D projection remains open. Here, we demonstrate how artificial neural networks can be used as a replacement for the inverse Abel transform and-more importantly-how they can be used to directly "reinflate" 2D projections into their original 3D distributions, even in cases where no cylindrical symmetry is present. This is subject to the simulation of appropriate training data based on known analytical expressions describing the general functional form of the overall anisotropy. Using both simulated and real experimental data, we show how our arbitrary image reinflation (AIR) neural network can be utilized for a range of different examples, potentially offering a simple and flexible alternative to more expensive and complicated 3D imaging techniques.
Collapse
Affiliation(s)
- Chris Sparling
- Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh EH14 4AS, United Kingdom
| | - Alice Ruget
- Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh EH14 4AS, United Kingdom
| | - Jonathan Leach
- Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh EH14 4AS, United Kingdom
| | - Dave Townsend
- Institute of Photonics and Quantum Sciences, Heriot-Watt University, Edinburgh EH14 4AS, United Kingdom
| |
Collapse
|
5
|
Benitez Y, Nguyen TL, Parsons AJ, Stanton JF, Continetti RE. Probing the Exit Channel of the OH + CH 3OH → H 2O + CH 3O Reaction by Photodetachment of CH 3O -(H 2O). J Phys Chem Lett 2022; 13:142-148. [PMID: 34962408 DOI: 10.1021/acs.jpclett.1c03568] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Transition state dynamics of bimolecular reactions can be probed by photodetachment of a precursor anion when the Franck-Condon region of the corresponding neutral potential energy surface is near a saddle point. In this study, photodetachment of anions at m/z = 49 enabled investigation of the exit channel of the OH + CH3OH → H2O + CH3O reaction using photoelectron-photofragment coincidence spectroscopy. High-level coupled-cluster calculations of the stationary points on the anion surface show that the methoxide-water cluster CH3O-(H2O) is the stable minimum on the anion surface. Photodetachment at a 3.20 eV photon energy leads to long-lived H2O(CH3O) complexes and H2O + CH3O products consistent with both direct dissociative photodetachment and resonance mediated processes on the neutral surface. The partitioning of total kinetic energy in the system indicates that water stretch and bend excitation is induced in dissociative photodetachment and evidence for long-lived complexes consistent with vibrational Feshbach resonances is reported.
Collapse
Affiliation(s)
- Yanice Benitez
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340, United States
| | - Thanh Lam Nguyen
- Quantum Theory Project, Department of Chemistry and Physics, University of Florida, Gainesville, Florida 32611, United States
| | - Austin J Parsons
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340, United States
| | - John F Stanton
- Quantum Theory Project, Department of Chemistry and Physics, University of Florida, Gainesville, Florida 32611, United States
| | - Robert E Continetti
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340, United States
| |
Collapse
|
6
|
Orunesajo E, Basnayake G, Ranathunga Y, Stewart G, Heathcote D, Vallance C, Lee SK, Li W. All-Optical Three-Dimensional Electron Momentum Imaging. J Phys Chem A 2021; 125:5220-5225. [PMID: 34097418 DOI: 10.1021/acs.jpca.1c03445] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We report a new implementation of three-dimensional (3D) momentum imaging for electrons, employing a two-dimensional (2D) imaging detector and a silicon photomultiplier tube (siPMT). To achieve the necessary time resolution for 3D electron imaging, a poly(p-phenylene)-dye-based fast scintillator (Exalite 404) was used in the imaging detector instead of conventional phosphors. The system demonstrated an electron time-of-flight resolution comparable with that of electrical MCP pick-off (tens of picoseconds), while achieving an unprecedented dead time reduction (∼0.48 ns) when detecting two electrons.
Collapse
Affiliation(s)
- Emmanuel Orunesajo
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - Gihan Basnayake
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - Yasashri Ranathunga
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - Gabriel Stewart
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - David Heathcote
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K
| | - Claire Vallance
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford OX1 3TA, U.K
| | - Suk Kyoung Lee
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - Wen Li
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| |
Collapse
|
7
|
Liu Y, Hu MG, Nichols MA, Yang D, Xie D, Guo H, Ni KK. Precision test of statistical dynamics with state-to-state ultracold chemistry. Nature 2021; 593:379-384. [PMID: 34012086 DOI: 10.1038/s41586-021-03459-6] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Accepted: 03/16/2021] [Indexed: 02/04/2023]
Abstract
Chemical reactions represent a class of quantum problems that challenge both the current theoretical understanding and computational capabilities1. Reactions that occur at ultralow temperatures provide an ideal testing ground for quantum chemistry and scattering theories, because they can be experimentally studied with unprecedented control2, yet display dynamics that are highly complex3. Here we report the full product state distribution for the reaction 2KRb → K2 + Rb2. Ultracold preparation of the reactants allows us complete control over their initial quantum degrees of freedom, whereas state-resolved, coincident detection of both products enables the probability of scattering into each of the 57 allowed rotational state-pairs to be measured. Our results show an overall agreement with a state-counting model based on statistical theory4-6, but also reveal several deviating state-pairs. In particular, we observe a strong suppression of population in the state-pair closest to the exoergicity limit as a result of the long-range potential inhibiting the escape of products. The completeness of our measurements provides a benchmark for quantum dynamics calculations beyond the current state of the art.
Collapse
Affiliation(s)
- Yu Liu
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA. .,Department of Physics, Harvard University, Cambridge, MA, USA. .,Harvard-MIT Center for Ultracold Atoms, Cambridge, MA, USA. .,Time and Frequency Division, National Institute of Standards and Technology, Boulder, CO, USA.
| | - Ming-Guang Hu
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.,Department of Physics, Harvard University, Cambridge, MA, USA.,Harvard-MIT Center for Ultracold Atoms, Cambridge, MA, USA
| | - Matthew A Nichols
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.,Department of Physics, Harvard University, Cambridge, MA, USA.,Harvard-MIT Center for Ultracold Atoms, Cambridge, MA, USA
| | - Dongzheng Yang
- Institute of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, China
| | - Daiqian Xie
- Institute of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, NM, USA
| | - Kang-Kuen Ni
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA. .,Department of Physics, Harvard University, Cambridge, MA, USA. .,Harvard-MIT Center for Ultracold Atoms, Cambridge, MA, USA.
| |
Collapse
|
8
|
Ozga C, Honisch C, Schmidt P, Holzapfel X, Zindel C, Küstner-Wetekam C, Richter C, Hergenhahn U, Ehresmann A, Knie A, Hans A. Photon-electron coincidence experiments at synchrotron radiation facilities with arbitrary bunch modes. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2021; 92:045110. [PMID: 34243486 DOI: 10.1063/5.0040179] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2020] [Accepted: 04/05/2021] [Indexed: 06/13/2023]
Abstract
We report the adaptation of an electron-photon coincidence detection scheme to the multibunch hybrid mode of the synchrotron radiation source BESSY II (Helmholtz-Zentrum Berlin). Single-event-based data acquisition and evaluation, combined with the use of relative detection times between the coincident particles, enable the acquisition of proper coincidence signals from a quasi-continuous excitation pattern. The background signal produced by accidental coincidences in the time difference representation is modeled using the non-coincident electron and photon spectra. We validate the method by reproducing previously published results, which were obtained in the single bunch mode, and illustrate its usability for the multibunch hybrid mode by investigating the photoionization of CO2 into CO2 + B satellite states, followed by subsequent photon emission. The radiative lifetime obtained and the electron binding energy are in good agreement with earlier publications. We expect this method to be a useful tool to extend the versatility of coincident particle detection to arbitrary operation modes of synchrotron radiation facilities and other excitation sources without the need for additional experimental adjustments.
Collapse
Affiliation(s)
- C Ozga
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - C Honisch
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - Ph Schmidt
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - X Holzapfel
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - C Zindel
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - C Küstner-Wetekam
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - C Richter
- Leibniz-Institut für Oberflächenmodifizierung (IOM), Permoserstraße 15, 04318 Leipzig, Germany
| | - U Hergenhahn
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - A Ehresmann
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - A Knie
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - A Hans
- Institut für Physik und CINSaT, Universität Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| |
Collapse
|
9
|
Saito K, Sugiura Y, Miyazaki T, Takahashi Y, Takayanagi T. Quantum calculations of the photoelectron spectra of the OH -·NH 3 anion: implications for OH + NH 3→ H 2O + NH 2 reaction dynamics. Phys Chem Chem Phys 2021; 23:6950-6958. [PMID: 33729225 DOI: 10.1039/d0cp06514e] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
We present the results of quantum dynamics calculations for analyzing the experimentally measured photoelectron spectra of the OH-·NH3 anion complex. Detachment of an excess electron of OH-·NH3 initially produces a molecular arrangement, which is close to the transition-state structure of the neutral OH + NH3→ H2O + NH2 hydrogen abstraction reaction due to the Franck-Condon principle, and thus finally leads to the OH + NH3 or H2O + NH2 asymptotic channel. We used both the path integral method and the reduced-dimensionality quantum wave packet method to simulate the photoelectron spectra of the OH-·NH3 anion. The calculated spectra were found to be in qualitative agreement with the experimental spectra. It was found that the photodetached complex mainly dissociates into the OH + NH3 channel; however, we found that the hydrogen exchange process also contributes to the photodetachment spectra.
Collapse
Affiliation(s)
- Kohei Saito
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Sakura-ku, Saitama City, Saitama 338-8570, Japan.
| | | | | | | | | |
Collapse
|
10
|
Sparling C, Ruget A, Kotsina N, Leach J, Townsend D. Artificial Neural Networks for Noise Removal in Data-Sparse Charged Particle Imaging Experiments. Chemphyschem 2021; 22:76-82. [PMID: 33206447 DOI: 10.1002/cphc.202000808] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Revised: 10/24/2020] [Indexed: 11/07/2022]
Abstract
We present the first demonstration of artificial neural networks (ANNs) for the removal of Poissonian noise in charged particle imaging measurements with very low overall counts. The approach is successfully applied to both simulated and real experimental image data relating to the detection of photoions/photoelectrons in unimolecular photochemical dynamics studies. Specific examples consider the multiphoton ionization of pyrrole and (S)-camphor. Our results reveal an extremely high level of performance, with the ANNs transforming images that are unusable for any form of quantitative analysis into statistically reliable data with an impressive similarity to benchmark references. Given the widespread use of charged particle imaging methods within the chemical dynamics community, we anticipate that the use of ANNs has significant potential impact - particularly, for example, when working in the limit of very low absorption/photoionization cross-sections, or when attempting to reliably extract subtle image features originating from phenomena such as photofragment vector correlations or photoelectron circular dichroism.
Collapse
Affiliation(s)
- Chris Sparling
- Institute of Photonics & Quantum Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK
| | - Alice Ruget
- Institute of Photonics & Quantum Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK
| | - Nikoleta Kotsina
- Institute of Photonics & Quantum Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK
| | - Jonathan Leach
- Institute of Photonics & Quantum Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK
| | - Dave Townsend
- Institute of Photonics & Quantum Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK.,Institute of Chemical Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK
| |
Collapse
|
11
|
Three-dimensional covariance-map imaging of molecular structure and dynamics on the ultrafast timescale. Commun Chem 2020; 3:72. [PMID: 36703470 PMCID: PMC9814411 DOI: 10.1038/s42004-020-0320-3] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Accepted: 05/15/2020] [Indexed: 01/29/2023] Open
Abstract
Ultrafast laser pump-probe methods allow chemical reactions to be followed in real time, and have provided unprecedented insight into fundamental aspects of chemical reactivity. While evolution of the electronic structure of the system under study is evident from changes in the observed spectral signatures, information on rearrangement of the nuclear framework is generally obtained indirectly. Disentangling contributions to the signal arising from competing photochemical pathways can also be challenging. Here we introduce the new technique of three-dimensional covariance-map Coulomb explosion imaging, which has the potential to provide complete three-dimensional information on molecular structure and dynamics as they evolve in real time during a gas-phase chemical reaction. We present first proof-of-concept data from recent measurements on CF3I. Our approach allows the contributions from competing fragmentation pathways to be isolated and characterised unambiguously, and is a promising route to enabling the recording of 'molecular movies' for a wide variety of gas-phase chemical processes.
Collapse
|
12
|
Gao XF, Li H, Meng X, Xie JC, Tian SX. Synchronous and asynchronous dynamics of the concerted three-body dissociations of temporary negative ion CH 2F 2. J Chem Phys 2020; 152:084305. [PMID: 32113364 DOI: 10.1063/1.5135609] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Molecular concerted three-body dissociation is a fast process, but still can be classified into synchronous and asynchronous pathways. It is challenging in experiments to evaluate different contributions of the aforementioned mechanisms. Here, we report an experimental identification of the synchronous and asynchronous concerted three-body dissociations of temporary negative ion CH2F2 - at an electron-molecule resonant state formed by electron attachment. The synchronous-asynchronous branching ratios indicate that the asynchronous process is predominant although the synchronous contribution is slightly enhanced with the increase in the electron attachment energy. This study provides two intuitive pictures of the concerted three-body dissociations, in particular for the nonequivalent-bond cleavages of a polyatomic molecule.
Collapse
Affiliation(s)
- Xiao-Fei Gao
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
| | - Hao Li
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
| | - Xin Meng
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
| | - Jing-Chen Xie
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
| | - Shan Xi Tian
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
| |
Collapse
|
13
|
Chatterley AS, Baatrup MO, Schouder CA, Stapelfeldt H. Laser-induced alignment dynamics of gas phase CS 2 dimers. Phys Chem Chem Phys 2020; 22:3245-3253. [PMID: 31995073 DOI: 10.1039/c9cp06260b] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Rotational dynamics of gas phase carbon disulfide (CS2) dimers were induced by a moderately intense, circularly polarized alignment laser pulse and measured as a function of time by Coulomb explosion imaging with an intense fs probe pulse. For the alignment pulse, two different temporal intensity profiles were used: a truncated pulse with a 150 ps turn-on and a 8 ps turn-off, or a 'kick' pulse with a duration of 1.3 ps. For both types of pulse, rich rotational dynamics with characteristic full and fractional revivals were recorded, showing that the intermolecular carbon-carbon axis periodically aligns along the propagation direction of the laser pulses. The truncated pulse gave the strongest alignment, which we rationalize as being due to a flat relative phase between the components in the rotational wave packet generated. Fourier analysis of the alignment dynamics gave well-spaced peaks which were fit to determine the rotational constant, B, and the centrifugal constant, DJ, for the ground state of the dimer. Our results agree with values from high-resolution IR spectroscopy. Numerical simulations of the alignment accurately reproduced the experimental dynamics when the truncated pulse or a low intensity kick pulse was used, but failed to reproduce the dynamics induced by a high intensity kick pulse. We posit that the discrepancy is due to excitation of the intermolecular torsional motion by the kick pulse.
Collapse
Affiliation(s)
| | - Mia O Baatrup
- Department of Physics and Astronomy, Aarhus University, 8000 Aarhus C, Denmark
| | - Constant A Schouder
- Department of Physics and Astronomy, Aarhus University, 8000 Aarhus C, Denmark
| | | |
Collapse
|
14
|
Debrah DA, Stewart GA, Basnayake G, Nomerotski A, Svihra P, Lee SK, Li W. Developing a camera-based 3D momentum imaging system capable of 1 Mhits/s. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2020; 91:023316. [PMID: 32113393 DOI: 10.1063/1.5138731] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2019] [Accepted: 01/23/2020] [Indexed: 06/10/2023]
Abstract
A camera-based three-dimensional (3D) imaging system with a superb time-of-flight (TOF) resolution and multi-hit capability was recently developed for electron/ion imaging [Lee et al. J. Chem. Phys. 141, 221101 (2014)]. In this work, we report further improvement of the event rate of the system by adopting an event-driven camera, Tpx3Cam, for detecting the 2D positions of electrons, while a high-speed digitizer provides highly accurate (∼30 ps) TOF information for each event at a rate approaching 1 Mhits/sec.
Collapse
Affiliation(s)
- Duke A Debrah
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| | - Gabriel A Stewart
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| | - Gihan Basnayake
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| | - Andrei Nomerotski
- Physics Department, Brookhaven National Laboratory, Upton, New York 11973, USA
| | - Peter Svihra
- Physics Department, Brookhaven National Laboratory, Upton, New York 11973, USA
| | - Suk Kyoung Lee
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| | - Wen Li
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| |
Collapse
|
15
|
Benitez Y, Lu D, Lunny KG, Li J, Guo H, Continetti RE. Photoelectron–Photofragment Coincidence Studies on the Dissociation Dynamics of the OH–CH4 Complex. J Phys Chem A 2019; 123:4825-4833. [DOI: 10.1021/acs.jpca.9b02441] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Yanice Benitez
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - Dandan Lu
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Katharine G. Lunny
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093, United States
| | - Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
- Institut für Physikalische Chemie, Theoretische Chemie, Universität Göttingen, Göttingen 37077, Germany
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Robert E. Continetti
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093, United States
| |
Collapse
|
16
|
Shen BB, Lunny KG, Benitez Y, Continetti RE. Photoelectron-Photofragment Coincidence Spectroscopy With Ions Prepared in a Cryogenic Octopole Accumulation Trap: Collisional Excitation and Buffer Gas Cooling. Front Chem 2019; 7:295. [PMID: 31114785 PMCID: PMC6503059 DOI: 10.3389/fchem.2019.00295] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2019] [Accepted: 04/10/2019] [Indexed: 11/17/2022] Open
Abstract
A cryogenic octopole accumulation trap (COAT) has been coupled to a photoelectron-photofragment coincidence (PPC) spectrometer allowing for improved control over anion vibrational excitation. The anions are heated and cooled via collisions with buffer gas <17 K. Shorter trapping times (500 μs) prevent thermalization and result in anions with high internal excitation while longer trapping times (80 ms) at cryogenic temperatures thermalize the ions to the temperature of the buffer gas. The capabilities of the COAT are demonstrated using PPC spectroscopy ofO 3 - at 388 nm (Ehν = 3.20 eV). Cooling the precursor anions with COAT resulted in the elimination of the autodetachment of vibrationally excitedO 2 - produced by the photodissociationO 3 - + hν → O +O 2 - (v ≥ 4). Under heating conditions, a lower limit temperature for the anions was determined to be 1,500 K through Franck-Condon simulations of the photodetachment spectrum ofO 3 - , considering a significant fraction of the ions undergo photodissociation in competition with photodetachment. The ability to cool or heat ions by varying ion injection and trapping duration in COAT provides a new flexibility for studying the spectroscopy of cold ions as well as thermally activated processes.
Collapse
Affiliation(s)
| | | | | | - Robert E. Continetti
- Department of Chemistry and Biochemistry, University of California, San Diego, San Diego, CA, United States
| |
Collapse
|
17
|
Guo L, Li J, Ma J, Guo H. Quantum dynamical investigation of product state distributions of the F + CH3OH → HF + CH3O reaction via photodetachment of the F−(HOCH3) anion. J Chem Phys 2019; 150:044301. [DOI: 10.1063/1.5082274] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Lifen Guo
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu, Sichuan 610065, China
| | - Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Jianyi Ma
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu, Sichuan 610065, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| |
Collapse
|
18
|
Bayesian Analysis of Femtosecond Pump-Probe Photoelectron-Photoion Coincidence Spectra with Fluctuating Laser Intensities. ENTROPY 2019; 21:e21010093. [PMID: 33266809 PMCID: PMC7514205 DOI: 10.3390/e21010093] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Revised: 01/10/2019] [Accepted: 01/16/2019] [Indexed: 11/17/2022]
Abstract
This paper employs Bayesian probability theory for analyzing data generated in femtosecond pump-probe photoelectron-photoion coincidence (PEPICO) experiments. These experiments allow investigating ultrafast dynamical processes in photoexcited molecules. Bayesian probability theory is consistently applied to data analysis problems occurring in these types of experiments such as background subtraction and false coincidences. We previously demonstrated that the Bayesian formalism has many advantages, amongst which are compensation of false coincidences, no overestimation of pump-only contributions, significantly increased signal-to-noise ratio, and applicability to any experimental situation and noise statistics. Most importantly, by accounting for false coincidences, our approach allows running experiments at higher ionization rates, resulting in an appreciable reduction of data acquisition times. In addition to our previous paper, we include fluctuating laser intensities, of which the straightforward implementation highlights yet another advantage of the Bayesian formalism. Our method is thoroughly scrutinized by challenging mock data, where we find a minor impact of laser fluctuations on false coincidences, yet a noteworthy influence on background subtraction. We apply our algorithm to data obtained in experiments and discuss the impact of laser fluctuations on the data analysis.
Collapse
|
19
|
Gibbard JA, Shin AJ, Castracane E, Continetti RE. A high beam energy photoelectron-photofragment coincidence spectrometer for complex anions. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2018; 89:123304. [PMID: 30599593 DOI: 10.1063/1.5074112] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Accepted: 11/20/2018] [Indexed: 06/09/2023]
Abstract
A new high beam energy photoelectron-photofragment coincidence (PPC) spectrometer is described that allows acceleration of heavy anions (>100 amu) to energies in the tens of keV using a linear accelerator (LINAC). High beam energies result in more efficient detection of the neutral photofragments produced via dissociative photodetachment (DPD) of the parent anion and increase the mass range that can be studied with PPC spectroscopy. The novel experimental setup couples an electrospray ionization (ESI) source and a hexapole accumulation trap with a 10-stage LINAC to give a kinematically complete measurement of the dissociation dynamics for heavier anions. ESI dramatically increases the range of anions that can be studied by PPC spectroscopy to include multiply charged anions and larger, more complex molecular ions important in biological, atmospheric, and combustion processes. A radiofrequency buffer-gas-cooled hexapole trap is used to accumulate sufficient ion density for single-shot coincidence measurements and thermalize the anions to room temperature. The photoelectron and up to three neutral fragments resulting from DPD are recorded in coincidence using time and position sensitive detectors. This novel experimental setup is characterized by studying the photodetachment of I-, and the DPD of I 2 - and the oxalate anion C2O4H- at beam energies of 11 keV, 16 keV, and 21 keV.
Collapse
Affiliation(s)
- J A Gibbard
- Department of Chemistry and Biochemistry, University of California, 9500 Gilman Dr, La Jolla, San Diego, California 92093-0340, USA
| | - A J Shin
- Department of Chemistry and Biochemistry, University of California, 9500 Gilman Dr, La Jolla, San Diego, California 92093-0340, USA
| | - E Castracane
- Department of Chemistry and Biochemistry, University of California, 9500 Gilman Dr, La Jolla, San Diego, California 92093-0340, USA
| | - R E Continetti
- Department of Chemistry and Biochemistry, University of California, 9500 Gilman Dr, La Jolla, San Diego, California 92093-0340, USA
| |
Collapse
|
20
|
Suits AG. Invited Review Article: Photofragment imaging. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2018; 89:111101. [PMID: 30501356 DOI: 10.1063/1.5045325] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Accepted: 10/25/2018] [Indexed: 06/09/2023]
Abstract
Photodissociation studies in molecular beams that employ position-sensitive particle detection to map product recoil velocities emerged thirty years ago and continue to evolve with new laser and detector technologies. These powerful methods allow application of tunable laser detection of single product quantum states, simultaneous measurement of velocity and angular momentum polarization, measurement of joint product state distributions for the detected and undetected products, coincident detection of multiple product channels, and application to radicals and ions as well as closed-shell molecules. These studies have permitted deep investigation of photochemical dynamics for a broad range of systems, revealed new reaction mechanisms, and addressed problems of practical importance in atmospheric, combustion, and interstellar chemistry. This review presents an historical overview, a detailed technical account of the range of methods employed, and selected experimental highlights illustrating the capabilities of the method.
Collapse
Affiliation(s)
- Arthur G Suits
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, USA
| |
Collapse
|
21
|
Abulimiti B, Hao QL, Qin C, Xiang M, Zhang B. Three-Body photodissociation of thionyl chloride. CHINESE J CHEM PHYS 2018. [DOI: 10.1063/1674-0068/31/cjcp1711218] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Bumaliya Abulimiti
- College of Physics and Electronic Engineering, Xinjiang Normal University, Urumqi 830054, China
| | - Qiao-li Hao
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Chen Qin
- College of Physics and Electronic Engineering, Xinjiang Normal University, Urumqi 830054, China
| | - Mei Xiang
- College of Physics and Electronic Engineering, Xinjiang Normal University, Urumqi 830054, China
| | - Bing Zhang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| |
Collapse
|
22
|
Zhao H, Xie D, Guo H. Quantum dynamics of ClH 2O - photodetachment: Isotope effect and impact of anion vibrational excitation. J Chem Phys 2018; 148:064305. [PMID: 29448793 DOI: 10.1063/1.5020270] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Photodetachment of the ClH2O- anion is investigated using full-dimensional quantum mechanics on accurate potential energy surfaces of both the anion and neutral species. Detailed analysis of the photoelectron spectrum and the corresponding wavefunctions reveals that the photodetachment leads to, in the product channel of the exothermic HCl + OH → Cl + H2O reaction, the formation of numerous Feshbach resonances due apparently to slow energy transfer from H2O vibrational modes to the dissociation coordinate. These long-lived resonances can be grouped into two broad peaks in the low-resolution photoelectron spectrum, which is in good agreement with available experiments, and they are assigned to the ground and first excited OH stretching vibrational manifolds of H2O complexed with Cl. In addition, effects of isotope substitution on the photoelectron spectrum were small. Finally, photodetachment of the vibrationally excited ClH2O- in the ionic hydrogen bond mode is found to lead to Feshbach resonances with higher stretching vibrational excitations in H2O.
Collapse
Affiliation(s)
- Hailin Zhao
- Institute of Theoretical and Computational Chemistry, Key Laboratory of Mesoscopic Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210093, China
| | - Daiqian Xie
- Institute of Theoretical and Computational Chemistry, Key Laboratory of Mesoscopic Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210093, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| |
Collapse
|
23
|
Molecular Dynamics of XFEL-Induced Photo-Dissociation, Revealed by Ion-Ion Coincidence Measurements. APPLIED SCIENCES-BASEL 2017. [DOI: 10.3390/app7050531] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
|
24
|
Abstract
Recent experimental and theoretical advances in transient reaction dynamics probed by photodetachment of polyatomic anions are reviewed.
Collapse
Affiliation(s)
- Robert E. Continetti
- Department of Chemistry and Biochemistry
- University of California San Diego
- La Jolla
- USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
| |
Collapse
|
25
|
Wu C, Wu C, Fan Y, Xie X, Wang P, Deng Y, Liu Y, Gong Q. Three-body fragmentation of CO2 driven by intense laser pulses. J Chem Phys 2015; 142:124303. [DOI: 10.1063/1.4916045] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Chengyin Wu
- State Key Laboratory for Mesoscopic Physics, Department of Physics, Peking University, Beijing 100871, People’s Republic of China
- Collaborative Innovation Center of Quantum Matter, Beijing 100871, People’s Republic of China
| | - Cong Wu
- State Key Laboratory for Mesoscopic Physics, Department of Physics, Peking University, Beijing 100871, People’s Republic of China
| | - Yameng Fan
- State Key Laboratory for Mesoscopic Physics, Department of Physics, Peking University, Beijing 100871, People’s Republic of China
| | - Xiguo Xie
- State Key Laboratory for Mesoscopic Physics, Department of Physics, Peking University, Beijing 100871, People’s Republic of China
| | - Peng Wang
- State Key Laboratory for Mesoscopic Physics, Department of Physics, Peking University, Beijing 100871, People’s Republic of China
| | - Yongkai Deng
- State Key Laboratory for Mesoscopic Physics, Department of Physics, Peking University, Beijing 100871, People’s Republic of China
| | - Yunquan Liu
- State Key Laboratory for Mesoscopic Physics, Department of Physics, Peking University, Beijing 100871, People’s Republic of China
- Collaborative Innovation Center of Quantum Matter, Beijing 100871, People’s Republic of China
| | - Qihuang Gong
- State Key Laboratory for Mesoscopic Physics, Department of Physics, Peking University, Beijing 100871, People’s Republic of China
- Collaborative Innovation Center of Quantum Matter, Beijing 100871, People’s Republic of China
| |
Collapse
|
26
|
Otto R, Ma J, Ray AW, Daluz JS, Li J, Guo H, Continetti RE. Imaging Dynamics on the F + H
2
O → HF + OH Potential Energy Surfaces from Wells to Barriers. Science 2014; 343:396-9. [DOI: 10.1126/science.1247424] [Citation(s) in RCA: 81] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Affiliation(s)
- Rico Otto
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Jianyi Ma
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu, Sichuan 610065, China
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, NM 87131, USA
| | - Amelia W. Ray
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Jennifer S. Daluz
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Jun Li
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, NM 87131, USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, NM 87131, USA
| | - Robert E. Continetti
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| |
Collapse
|
27
|
Vallance C, Brouard M, Lauer A, Slater CS, Halford E, Winter B, King SJ, Lee JWL, Pooley DE, Sedgwick I, Turchetta R, Nomerotski A, John JJ, Hill L. Fast sensors for time-of-flight imaging applications. Phys Chem Chem Phys 2014; 16:383-95. [DOI: 10.1039/c3cp53183j] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
28
|
Laksman J, Céolin D, Månsson EP, Sorensen SL, Gisselbrecht M. Development and characterization of a multiple-coincidence ion-momentum imaging spectrometer. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2013; 84:123113. [PMID: 24387426 DOI: 10.1063/1.4853435] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The design and performance of a high-resolution momentum-imaging spectrometer for ions which is optimized for experiments using synchrotron radiation is presented. High collection efficiency is achieved by a focusing electrostatic lens; a long drift tube improves mass resolution and a position-sensitive detector enables measurement of the transverse momentum of ions. The optimisation of the lens for particle momentum measurement at the highest resolution is described. We discuss the overall performance of the spectrometer and present examples demonstrating the momentum resolution for both kinetics and for angular measurements in molecular fragmentation for carbon monoxide and fullerenes. Examples are presented that confirm that complete space-time focussing is possible for a two-field three-dimensional imaging spectrometer.
Collapse
Affiliation(s)
- J Laksman
- Department of Synchrotron Radiation Research, Lund University, Box 118, S-221 00 Lund, Sweden
| | - D Céolin
- Department of Synchrotron Radiation Research, Lund University, Box 118, S-221 00 Lund, Sweden
| | - E P Månsson
- Department of Synchrotron Radiation Research, Lund University, Box 118, S-221 00 Lund, Sweden
| | - S L Sorensen
- Department of Synchrotron Radiation Research, Lund University, Box 118, S-221 00 Lund, Sweden
| | - M Gisselbrecht
- Department of Synchrotron Radiation Research, Lund University, Box 118, S-221 00 Lund, Sweden
| |
Collapse
|
29
|
Staniforth M, Stavros VG. Recent advances in experimental techniques to probe fast excited-state dynamics in biological molecules in the gas phase: dynamics in nucleotides, amino acids and beyond. Proc Math Phys Eng Sci 2013; 469:20130458. [PMID: 24204191 PMCID: PMC3780818 DOI: 10.1098/rspa.2013.0458] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2013] [Accepted: 08/07/2013] [Indexed: 11/23/2022] Open
Abstract
In many chemical reactions, an activation barrier must be overcome before a chemical transformation can occur. As such, understanding the behaviour of molecules in energetically excited states is critical to understanding the chemical changes that these molecules undergo. Among the most prominent reactions for mankind to understand are chemical changes that occur in our own biological molecules. A notable example is the focus towards understanding the interaction of DNA with ultraviolet radiation and the subsequent chemical changes. However, the interaction of radiation with large biological structures is highly complex, and thus the photochemistry of these systems as a whole is poorly understood. Studying the gas-phase spectroscopy and ultrafast dynamics of the building blocks of these more complex biomolecules offers the tantalizing prospect of providing a scientifically intuitive bottom-up approach, beginning with the study of the subunits of large polymeric biomolecules and monitoring the evolution in photochemistry as the complexity of the molecules is increased. While highly attractive, one of the main challenges of this approach is in transferring large, and in many cases, thermally labile molecules into vacuum. This review discusses the recent advances in cutting-edge experimental methodologies, emerging as excellent candidates for progressing this bottom-up approach.
Collapse
Affiliation(s)
| | - Vasilios G. Stavros
- Department of Chemistry, University of Warwick, Library Road, Coventry CV4 7AL, UK
| |
Collapse
|
30
|
Lehmann CS, Ram NB, Janssen MHM. Velocity map photoelectron-photoion coincidence imaging on a single detector. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2012; 83:093103. [PMID: 23020358 DOI: 10.1063/1.4749843] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Here we report on a new simplified setup for velocity map photoelectron-photoion coincidence imaging using only a single particle detector. We show that both photoelectrons and photoions can be extracted toward the same micro-channel-plate delay line detector by fast switching of the high voltages on the ion optics. This single detector setup retains essentially all the features of a standard two-detector coincidence imaging setup, viz., the high spatial resolution for electron and ion imaging, while only slightly decreasing the ion time-of-flight mass resolution. The new setup paves the way to a significant cost reduction in building a coincidence imaging setup for experiments aiming to obtain the complete correlated three-dimensional momentum distribution of electrons and ions.
Collapse
Affiliation(s)
- C Stefan Lehmann
- LaserLaB Amsterdam, VU University Amsterdam, de Boelelaan 1083, 1081 HV Amsterdam, The Netherlands
| | | | | |
Collapse
|
31
|
Chin CH, Lee SH. Comparison of two-body and three-body decomposition of ethanedial, propanal, propenal, n-butane, 1-butene, and 1,3-butadiene. J Chem Phys 2012; 136:024308. [DOI: 10.1063/1.3675682] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
|
32
|
Affiliation(s)
- David R. Yarkony
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| |
Collapse
|
33
|
Johnson CJ, Shen BB, Poad BLJ, Continetti RE. Photoelectron-photofragment coincidence spectroscopy in a cryogenically cooled linear electrostatic ion beam trap. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2011; 82:105105. [PMID: 22047327 DOI: 10.1063/1.3641875] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
A cryogenically cooled linear electrostatic ion beam trap for use in photoelectron-photofragment coincidence (PPC) spectroscopy is described. Using this instrument, anions created in cold, low-duty-cycle sources can be stored for many seconds in a ~20 K environment to cool radiatively, removing energetic uncertainties due to vibrationally excited precursor anions. This apparatus maintains a well-collimated beam necessary for high-resolution fragment imaging and the high experimental duty cycle needed for coincidence experiments. Ion oscillation is bunched and phase-locked to a modelocked laser, ensuring temporal overlap between ion bunches and laser pulses and that ions are intersected by the laser only when travelling in one direction. An electron detector is housed in the field-free center of the trap, allowing PPC experiments to be carried out on ions while they are stored and permitting efficient detection of 3-dimensional electron and neutral recoil trajectories. The effects of trapping parameters on the center-of-mass trajectories in the laser-ion interaction region are explored to optimize neutral particle resolution, and the impact of bunching on ion oscillation is established. Finally, an initial demonstration of radiative cooling is presented.
Collapse
Affiliation(s)
- Christopher J Johnson
- Department of Physics, University of California, San Diego, La Jolla, California 92093-0340, USA
| | | | | | | |
Collapse
|
34
|
Wu G, Hockett P, Stolow A. Time-resolved photoelectron spectroscopy: from wavepackets to observables. Phys Chem Chem Phys 2011; 13:18447-67. [PMID: 21947027 DOI: 10.1039/c1cp22031d] [Citation(s) in RCA: 66] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Time-resolved photoelectron spectroscopy (TRPES) is a powerful tool for the study of intramolecular dynamics, particularly excited state non-adiabatic dynamics in polyatomic molecules. Depending on the problem at hand, different levels of TRPES measurements can be performed: time-resolved photoelectron yield; time- and energy-resolved photoelectron yield; time-, energy-, and angle-resolved photoelectron yield. In this pedagogical overview, a conceptual framework for time-resolved photoionization measurements is presented, together with discussion of relevant theory for the different aspects of TRPES. Simple models are used to illustrate the theory, and key concepts are further amplified by experimental examples. These examples are chosen to show the application of TRPES to the investigation of a range of problems in the excited state dynamics of molecules: from the simplest vibrational wavepacket on a single potential energy surface; to disentangling intrinsically coupled electronic and nuclear motions; to identifying the electronic character of the intermediate states involved in non-adiabatic dynamics by angle-resolved measurements in the molecular frame, the most complete measurement.
Collapse
Affiliation(s)
- Guorong Wu
- Steacie Institute for Molecular Sciences, National Research Council, 100 Sussex Drive, Ottawa, Ontario K1A 0R6, Canada
| | | | | |
Collapse
|
35
|
Kettunen JA, Niskanen J, Huttula M, Vapa M, Urpelainen S, Aksela H. Electron-ion coincidence study of photofragmentation of the CdCl(2) molecule. JOURNAL OF MASS SPECTROMETRY : JMS 2011; 46:901-907. [PMID: 21915954 DOI: 10.1002/jms.1967] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
In this work, the photofragmentation subsequent to valence and Cd4d photoionization of cadmium dichloride (CdCl(2)) were studied using He I and synchrotron excitation. The measurements were performed with a photoelectron-photoion coincidence (PEPICO) setup, and the connection between the singly ionized electronic states and cationic fragments was investigated. The valence-ionized states were found to lead to CdCl(2)(+), Cd(+) and CdCl(+). The Cd4d(- 1) states were found to lead only to Cl(+) ions. The observed charge transfer effect between Cd and Cl was concluded to take place due to internal conversion or fluorescence decay to dissociating valence states either directly or through consecutive fragmentation. The fragmentation energetics were investigated with molecular ab initio calculations, and the calculated energies were found to agree with the detected fragment appearances.
Collapse
Affiliation(s)
- J A Kettunen
- Department of Physics, University of Oulu, P.O. Box 3000, FIN-90014, University of Oulu, Finland.
| | | | | | | | | | | |
Collapse
|
36
|
Han S, Yarkony DR. Determining partial differential cross sections for low-energy electron photodetachment involving conical intersections using the solution of a Lippmann-Schwinger equation constructed with standard electronic structure techniques. J Chem Phys 2011; 134:174104. [PMID: 21548670 DOI: 10.1063/1.3582807] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
A method for obtaining partial differential cross sections for low energy electron photodetachment in which the electronic states of the residual molecule are strongly coupled by conical intersections is reported. The method is based on the iterative solution to a Lippmann-Schwinger equation, using a zeroth order Hamiltonian consisting of the bound nonadiabatically coupled residual molecule and a free electron. The solution to the Lippmann-Schwinger equation involves only standard electronic structure techniques and a standard three-dimensional free particle Green's function quadrature for which fast techniques exist. The transition dipole moment for electron photodetachment, is a sum of matrix elements each involving one nonorthogonal orbital obtained from the solution to the Lippmann-Schwinger equation. An expression for the electron photodetachment transition dipole matrix element in terms of Dyson orbitals, which does not make the usual orthogonality assumptions, is derived.
Collapse
Affiliation(s)
- Seungsuk Han
- Department of Chemistry, Myong Ji University, Yongin, Kyunggido, Korea.
| | | |
Collapse
|
37
|
Vredenborg A, Lehmann CS, Irimia D, Roeterdink WG, Janssen MHM. The Reaction Microscope: Imaging and Pulse Shaping Control in Photodynamics. Chemphyschem 2011; 12:1459-73. [DOI: 10.1002/cphc.201100107] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2011] [Indexed: 11/09/2022]
|
38
|
Han S, Yarkony DR. On the determination of partial differential cross sections for photodetachment and photoionization processes producing polyatomic molecules with electronic states coupled by conical intersections. J Chem Phys 2011; 134:134110. [DOI: 10.1063/1.3567953] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
|
39
|
Affiliation(s)
- Dave Townsend
- School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, United Kingdom, and Steacie Institute for Molecular Sciences, National Research Council of Canada, 100 Sussex Drive, Ottawa, Ontario, K1A 0R6, Canada
| | - Benjamin J. Sussman
- School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, United Kingdom, and Steacie Institute for Molecular Sciences, National Research Council of Canada, 100 Sussex Drive, Ottawa, Ontario, K1A 0R6, Canada
| | - Albert Stolow
- School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, United Kingdom, and Steacie Institute for Molecular Sciences, National Research Council of Canada, 100 Sussex Drive, Ottawa, Ontario, K1A 0R6, Canada
| |
Collapse
|
40
|
Savee JD, Mann JE, Continetti RE. Dissociative Charge Exchange Dynamics of HOCO+ and DOCO+. J Phys Chem A 2009; 114:1485-91. [DOI: 10.1021/jp907480y] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- John D. Savee
- Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| | - Jennifer E. Mann
- Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| | - Robert E. Continetti
- Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| |
Collapse
|
41
|
Chichinin AI, Gericke KH, Kauczok S, Maul C. Imaging chemical reactions – 3D velocity mapping. INT REV PHYS CHEM 2009. [DOI: 10.1080/01442350903235045] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
|
42
|
Oana CM, Krylov AI. Cross sections and photoelectron angular distributions in photodetachment from negative ions using equation-of-motion coupled-cluster Dyson orbitals. J Chem Phys 2009; 131:124114. [DOI: 10.1063/1.3231143] [Citation(s) in RCA: 156] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
|
43
|
Revealing femtosecond multiphoton induced multichannel molecular ionization and fragmentation dynamics by photoelectron–photoion coincidence imaging. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.07.040] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
|
44
|
Savee JD, Mann JE, Continetti RE. Three-Body Dissociative Charge Exchange Dynamics of sym-Triazine. J Phys Chem A 2009; 113:3988-96. [DOI: 10.1021/jp810365f] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- John D. Savee
- Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| | - Jennifer E. Mann
- Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| | - Robert E. Continetti
- Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| |
Collapse
|
45
|
Garcia GA, Soldi-Lose H, Nahon L. A versatile electron-ion coincidence spectrometer for photoelectron momentum imaging and threshold spectroscopy on mass selected ions using synchrotron radiation. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2009; 80:023102. [PMID: 19256635 DOI: 10.1063/1.3079331] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We present a photoelectron-photoion coincidence (PEPICO) spectrometer named DELICIOUS II which combines a velocity map imaging apparatus with a Wiley-McLaren time of flight analyzer for the study of gas phase samples in interaction with the synchrotron radiation (SR). This versatile system is capable of providing photoelectron images on mass-selected compounds with kinetic energy resolutions of DeltaE/E=5% and a 17 eV bandwidth, as well as threshold photoelectron spectra with a measured resolution of 0.8 meV, as demonstrated on the 3p(-1) ionization of argon. This instrument is also employed for threshold PEPICO experiments, allowing the selection of the parent ion's internal state with sub-meV resolution for light masses (<40 amu) and with typically 2 meV resolution for a mass of 100 amu and with a mass resolving power above 200. The continuous operation of the extraction fields and the independence from the electron's time of flight are well adapted to the quasicontinuous multibunch mode of the SR. This, together with the high transmission of both the electron and ion detection, allows a high coincidence counting rate and facilitates the subtraction of false coincidences. We illustrate the spectrometer's coincidence principle of operation with examples from the valence photoionization of an Ar+Xe mixture and of CF(4).
Collapse
Affiliation(s)
- Gustavo A Garcia
- Synchrotron SOLEIL, L'Orme des Merisiers, St Aubin, B.P. 48, 91192 Gif sur Yvette, France.
| | | | | |
Collapse
|
46
|
Mozhayskiy VA, Savee JD, Mann JE, Continetti RE, Krylov AI. Conical for Stepwise, Glancing for Concerted: The Role of the Excited-State Topology in the Three-Body Dissociation of sym-Triazine. J Phys Chem A 2008; 112:12345-54. [DOI: 10.1021/jp806369s] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Vadim A. Mozhayskiy
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, and Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| | - John D. Savee
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, and Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| | - Jennifer E. Mann
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, and Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| | - Robert E. Continetti
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, and Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| | - Anna I. Krylov
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, and Department of Chemistry and Biochemistry, University of California at San Diego, 9500 Gilman Drive, La Jolla, California 92093-0340
| |
Collapse
|
47
|
Ho JW, Chen WK, Cheng PY. Unraveling Complex Three-Body Photodissociation Dynamics of Dimethyl Sulfoxide: A Femtosecond Time-Resolved Spectroscopic Study. J Phys Chem A 2008; 112:10453-68. [DOI: 10.1021/jp804847y] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jr-Wei Ho
- Department of Chemistry, National Tsing Hua University, Hsinchu, Taiwan, R. O. C
| | - Wei-Kan Chen
- Department of Chemistry, National Tsing Hua University, Hsinchu, Taiwan, R. O. C
| | - Po-Yuan Cheng
- Department of Chemistry, National Tsing Hua University, Hsinchu, Taiwan, R. O. C
| |
Collapse
|
48
|
Savee JD, Mozhayskiy VA, Mann JE, Krylov AI, Continetti RE. The Role of Excited-State Topology in Three-Body Dissociation of
sym
-Triazine. Science 2008; 321:826-30. [DOI: 10.1126/science.1157617] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Affiliation(s)
- John D. Savee
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093, USA
- Department of Chemistry, University of Southern California, Los Angeles, CA 90089, USA
| | - Vadim A. Mozhayskiy
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093, USA
- Department of Chemistry, University of Southern California, Los Angeles, CA 90089, USA
| | - Jennifer E. Mann
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093, USA
- Department of Chemistry, University of Southern California, Los Angeles, CA 90089, USA
| | - Anna I. Krylov
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093, USA
- Department of Chemistry, University of Southern California, Los Angeles, CA 90089, USA
| | - Robert E. Continetti
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093, USA
- Department of Chemistry, University of Southern California, Los Angeles, CA 90089, USA
| |
Collapse
|
49
|
Vredenborg A, Roeterdink WG, Janssen MHM. A photoelectron-photoion coincidence imaging apparatus for femtosecond time-resolved molecular dynamics with electron time-of-flight resolution of sigma=18 ps and energy resolution Delta E/E=3.5%. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2008; 79:063108. [PMID: 18601398 DOI: 10.1063/1.2949142] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We report on the construction and performance of a novel photoelectron-photoion coincidence machine in our laboratory in Amsterdam to measure the full three-dimensional momentum distribution of correlated electrons and ions in femtosecond time-resolved molecular beam experiments. We implemented sets of open electron and ion lenses to time stretch and velocity map the charged particles. Time switched voltages are operated on the particle lenses to enable optimal electric field strengths for velocity map focusing conditions of electrons and ions separately. The position and time sensitive detectors employ microchannel plates (MCPs) in front of delay line detectors. A special effort was made to obtain the time-of-flight (TOF) of the electrons at high temporal resolution using small pore (5 microm) MCPs and implementing fast timing electronics. We measured the TOF distribution of the electrons under our typical coincidence field strengths with a temporal resolution down to sigma=18 ps. We observed that our electron coincidence detector has a timing resolution better than sigma=16 ps, which is mainly determined by the residual transit time spread of the MCPs. The typical electron energy resolution appears to be nearly laser bandwidth limited with a relative resolution of DeltaE(FWHM)/E=3.5% for electrons with kinetic energy near 2 eV. The mass resolution of the ion detector for ions measured in coincidence with electrons is about Deltam(FWHM)/m=14150. The velocity map focusing of our extended source volume of particles, due to the overlap of the molecular beam with the laser beams, results in a parent ion spot on our detector focused down to sigma=115 microm.
Collapse
Affiliation(s)
- Arno Vredenborg
- Laser Centre and Department of Chemistry, Vrije Universiteit, Amsterdam, The Netherlands
| | | | | |
Collapse
|
50
|
Lu Z, Oakman JE, Hu Q, Continetti RE. Photoelectron-photofragment angular correlations in the dissociative photodetachment of HOCO−. Mol Phys 2008. [DOI: 10.1080/00268970801971376] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
|