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Large-scale cortical travelling waves predict localized future cortical signals. PLoS Comput Biol 2019; 15:e1007316. [PMID: 31730613 PMCID: PMC6894364 DOI: 10.1371/journal.pcbi.1007316] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Revised: 11/27/2019] [Accepted: 07/31/2019] [Indexed: 12/15/2022] Open
Abstract
Predicting future brain signal is highly sought-after, yet difficult to achieve.
To predict the future phase of cortical activity at localized ECoG and MEG
recording sites, we exploit its predominant, large-scale, spatiotemporal
dynamics. The dynamics are extracted from the brain signal through Fourier
analysis and principal components analysis (PCA) only, and cast in a data model
that predicts future signal at each site and frequency of interest. The dominant
eigenvectors of the PCA that map the large-scale patterns of past cortical phase
to future ones take the form of smoothly propagating waves over the entire
measurement array. In ECoG data from 3 subjects and MEG data from 20 subjects
collected during a self-initiated motor task, mean phase prediction errors were
as low as 0.5 radians at local sites, surpassing state-of-the-art methods of
within-time-series or event-related models. Prediction accuracy was highest in
delta to beta bands, depending on the subject, was more accurate during episodes
of high global power, but was not strongly dependent on the time-course of the
task. Prediction results did not require past data from the to-be-predicted
site. Rather, best accuracy depended on the availability in the model of long
wavelength information. The utility of large-scale, low spatial frequency
traveling waves in predicting future phase activity at local sites allows
estimation of the error introduced by failing to account for irreducible
trajectories in the activity dynamics. Prediction is an important step in scientific progress, often leading to
real-world applications. Prediction of future brain activity could lead to
improvements in detecting driver and pilot error or real-time brain testing
using transcranial magnetic stimulation. Previous studies have either supposed
that the ‘noise’ level in the cortex is high, setting the prediction bar rather
low; or used localized measurements to predict future activity, with modest
success. A long-held but controversial hypothesis is that the cortex is best
characterized as a multi-scale dynamic structure, in which the flow of activity
at one scale, say, the area responsible for motor control, is inextricably tied
to activity at smaller and larger scales, for example within a cortical column
and the whole cortex. We test this hypothesis by analyzing large-scale traveling
waves of cortical activity. Like waves arriving on a beach, the ongoing wave
motion allows better prediction of future activity compared to monitoring the
local rise and fall; in the best cases the future wave cycle is predicted with
as low as 20° average error angle. The prediction techniques developed for the
present research rely on mathematics related to quantifying large-scale weather
patterns or analysis of fluid dynamics.
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Ghosh A, Dal Maso F, Roig M, Mitsis GD, Boudrias MH. Unfolding the Effects of Acute Cardiovascular Exercise on Neural Correlates of Motor Learning Using Convolutional Neural Networks. Front Neurosci 2019; 13:1215. [PMID: 31798403 PMCID: PMC6868001 DOI: 10.3389/fnins.2019.01215] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Accepted: 10/28/2019] [Indexed: 12/19/2022] Open
Abstract
Cardiovascular exercise is known to promote the consolidation of newly acquired motor skills. Previous studies seeking to understand the neural correlates underlying motor memory consolidation that is modulated by exercise, have relied so far on using traditional statistical approaches for a priori selected features from neuroimaging data, including EEG. With recent advances in machine learning, data-driven techniques such as deep learning have shown great potential for EEG data decoding for brain-computer interfaces, but have not been explored in the context of exercise. Here, we present a novel Convolutional Neural Network (CNN)-based pipeline for analysis of EEG data to study the brain areas and spectral EEG measures modulated by exercise. To the best of our knowledge, this work is the first one to demonstrate the ability of CNNs to be trained in a limited sample size setting. Our approach revealed discriminative spectral features within a refined frequency band (27–29 Hz) as compared to the wider beta bandwidth (15–30 Hz), which is commonly used in data analyses, as well as corresponding brain regions that were modulated by exercise. These results indicate the presence of finer EEG spectral features that could have been overlooked using conventional hypothesis-driven statistical approaches. Our study thus demonstrates the feasibility of using deep network architectures for neuroimaging analysis, even in small-scale studies, to identify robust brain biomarkers and investigate neuroscience-based questions.
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Affiliation(s)
- Arna Ghosh
- Integrated Program in Neuroscience, McGill University, Montreal, QC, Canada
| | - Fabien Dal Maso
- École de Kinéiologie et des Sciences de l'Activité Physique, Université de Montréal, Montreal, QC, Canada
| | - Marc Roig
- School of Physical and Occupational Therapy, McGill University, Montreal, QC, Canada.,Center for Interdisciplinary Research in Rehabilitation of Greater Montreal (CRIR), Montreal, QC, Canada
| | - Georgios D Mitsis
- Department of Bioengineering, McGill University, Montreal, QC, Canada
| | - Marie-Hélène Boudrias
- School of Physical and Occupational Therapy, McGill University, Montreal, QC, Canada.,Center for Interdisciplinary Research in Rehabilitation of Greater Montreal (CRIR), Montreal, QC, Canada
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Factoring in the spatial effects of symbolic number representation. Biol Psychol 2019; 149:107782. [PMID: 31618663 DOI: 10.1016/j.biopsycho.2019.107782] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2019] [Revised: 07/08/2019] [Accepted: 10/08/2019] [Indexed: 11/23/2022]
Abstract
Spatial constituents of adult symbolic number representation produce effects of size-value congruity, Spatial Numerical Association of Response Codes (SNARC), and numerical distance. According to behavioral experiments, these effects belong to distinct processing stages. Yet, these effects evoke overlapping responses in both early and late Event Related Potentials (ERPs). To probe whether these overlaps indicate sharing of resources, all relevant stimulus and response conditions were factorially combined in a numerical value comparison task. To secure ERP validity, same numbers were compared against variable reference values. This design resulted in previously unobserved interactions in behavior but inhibited late ERP effects. All effects arose early in the P1 component (around 100 ms) and most showed hemispheric specificity. Independency of congruity and SNARC effects was observed, whereas SNARC and numerical distance were closely intertwined. Differences in hemispheric specificity, rather than stage-wise separation, were key to independence.
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Bridwell DA, Leslie E, McCoy DQ, Plis SM, Calhoun VD. Cortical Sensitivity to Guitar Note Patterns: EEG Entrainment to Repetition and Key. Front Hum Neurosci 2017; 11:90. [PMID: 28298889 PMCID: PMC5331856 DOI: 10.3389/fnhum.2017.00090] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Accepted: 02/14/2017] [Indexed: 11/13/2022] Open
Abstract
Music is ubiquitous throughout recent human culture, and many individual's have an innate ability to appreciate and understand music. Our appreciation of music likely emerges from the brain's ability to process a series of repeated complex acoustic patterns. In order to understand these processes further, cortical responses were measured to a series of guitar notes presented with a musical pattern or without a pattern. ERP responses to individual notes were measured using a 24 electrode Bluetooth mobile EEG system (Smarting mBrainTrain) while 13 healthy non-musicians listened to structured (i.e., within musical keys and with repetition) or random sequences of guitar notes for 10 min each. We demonstrate an increased amplitude to the ERP that appears ~200 ms to notes presented within the musical sequence. This amplitude difference between random notes and patterned notes likely reflects individual's cortical sensitivity to guitar note patterns. These amplitudes were compared to ERP responses to a rare note embedded within a stream of frequent notes to determine whether the sensitivity to complex musical structure overlaps with the sensitivity to simple irregularities reflected in traditional auditory oddball experiments. Response amplitudes to the negative peak at ~175 ms are statistically correlated with the mismatch negativity (MMN) response measured to a rare note presented among a series of frequent notes (i.e., in a traditional oddball sequence), but responses to the subsequent positive peak at ~200 do not show a statistical relationship with the P300 response. Thus, the sensitivity to musical structure identified to 4 Hz note patterns appears somewhat distinct from the sensitivity to statistical regularities reflected in the traditional "auditory oddball" sequence. Overall, we suggest that this is a promising approach to examine individual's sensitivity to complex acoustic patterns, which may overlap with higher level cognitive processes, including language.
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Affiliation(s)
| | | | - Dakarai Q McCoy
- The Mind Research NetworkAlbuquerque, NM, USA; Department of Electrical and Computer Engineering, University of New MexicoAlbuquerque, NM, USA; The MARC Program, University of New MexicoAlbuquerque, NM, USA
| | | | - Vince D Calhoun
- The Mind Research NetworkAlbuquerque, NM, USA; Department of Electrical and Computer Engineering, University of New MexicoAlbuquerque, NM, USA
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Uppal N, Foxe JJ, Butler JS, Acluche F, Molholm S. The neural dynamics of somatosensory processing and adaptation across childhood: a high-density electrical mapping study. J Neurophysiol 2016; 115:1605-19. [PMID: 26763781 DOI: 10.1152/jn.01059.2015] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2015] [Accepted: 01/11/2016] [Indexed: 11/22/2022] Open
Abstract
Young children are often hyperreactive to somatosensory inputs hardly noticed by adults, as exemplified by irritation to seams or labels in clothing. The neurodevelopmental mechanisms underlying changes in sensory reactivity are not well understood. Based on the idea that neurodevelopmental changes in somatosensory processing and/or changes in sensory adaptation might underlie developmental differences in somatosensory reactivity, high-density electroencephalography was used to examine how the nervous system responds and adapts to repeated vibrotactile stimulation over childhood. Participants aged 6-18 yr old were presented with 50-ms vibrotactile stimuli to the right wrist over the median nerve at 5 blocked interstimulus intervals (ranging from ∼7 to ∼1 stimulus per second). Somatosensory evoked potentials (SEPs) revealed three major phases of activation within the first 200 ms, with scalp topographies suggestive of neural generators in contralateral somatosensory cortex. Although overall SEPs were highly similar for younger, middle, and older age groups (6.1-9.8, 10.0-12.9, and 13.0-17.8 yr old), there were significant age-related amplitude differences in initial and later phases of the SEP. In contrast, robust adaptation effects for fast vs. slow presentation rates were observed that did not differ as a function of age. A greater amplitude response in the later portion of the SEP was observed for the youngest group and may be related to developmental changes in responsivity to somatosensory stimuli. These data suggest the protracted development of the somatosensory system over childhood, whereas adaptation, as assayed in this study, is largely in place by ∼7 yr of age.
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Affiliation(s)
- Neha Uppal
- The Sheryl and Daniel R. Tishman Cognitive Neurophysiology Laboratory, Children's Evaluation and Rehabilitation Center, Department of Pediatrics, Albert Einstein College of Medicine, Bronx, New York; Leadership Education in Neurodevelopmental Disabilities Program, Albert Einstein College of Medicine, Bronx, New York
| | - John J Foxe
- The Sheryl and Daniel R. Tishman Cognitive Neurophysiology Laboratory, Children's Evaluation and Rehabilitation Center, Department of Pediatrics, Albert Einstein College of Medicine, Bronx, New York; Trinity College Institute of Neuroscience, Trinity College, Dublin, Ireland; The Dominick P. Purpura Department of Neuroscience, Rose F. Kennedy Intellectual and Developmental Disabilities Research Center, Albert Einstein College of Medicine, Bronx, New York; The Ernest J. Del Monte Neuromedicine Institute, Department of Neuroscience, University of Rochester Medical Center, Rochester, New York; and
| | - John S Butler
- The Sheryl and Daniel R. Tishman Cognitive Neurophysiology Laboratory, Children's Evaluation and Rehabilitation Center, Department of Pediatrics, Albert Einstein College of Medicine, Bronx, New York; Trinity College Institute of Neuroscience, Trinity College, Dublin, Ireland; Trinity Centre for Bioengineering, Trinity College, Dublin, Ireland
| | - Frantzy Acluche
- The Sheryl and Daniel R. Tishman Cognitive Neurophysiology Laboratory, Children's Evaluation and Rehabilitation Center, Department of Pediatrics, Albert Einstein College of Medicine, Bronx, New York
| | - Sophie Molholm
- The Sheryl and Daniel R. Tishman Cognitive Neurophysiology Laboratory, Children's Evaluation and Rehabilitation Center, Department of Pediatrics, Albert Einstein College of Medicine, Bronx, New York; The Dominick P. Purpura Department of Neuroscience, Rose F. Kennedy Intellectual and Developmental Disabilities Research Center, Albert Einstein College of Medicine, Bronx, New York;
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