Bahreini F, Houshmand M, Modaresi MH, Tonekaboni H, Nafissi S, Nazari F, Akrami SM. Mitochondrial Copy Number and D-Loop Variants in Pompe Patients.
CELL JOURNAL 2016;
18:405-15. [PMID:
27602323 PMCID:
PMC5011329 DOI:
10.22074/cellj.2016.4569]
[Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/11/2015] [Accepted: 01/24/2016] [Indexed: 02/06/2023]
Abstract
Objective
Pompe disease is a rare neuromuscular genetic disorder and is classified
into two forms of early and late-onset. Over the past two decades, mitochondrial abnor-
malities have been recognized as an important contributor to an array of neuromuscular
diseases. We therefore aimed to compare mitochondrial copy number and mitochondrial
displacement-loop sequence variation in infantile and adult Pompe patients.
Materials and Methods
In this retrospective study, the mitochondrial D-loop sequence
was analyzed by polymerase chain reaction (PCR) and direct sequencing to detect pos-
sible variation in 28 Pompe patients (17 infants and 11 adults). Results were compared
with 100 healthy controls and sequences of all individuals were compared with the Cam-
bridge reference sequence. Real-time PCR was used to quantify mitochondrial DNA copy
number.
Results
Among 59 variants identified, 37(62.71%) were present in the infant group,
14(23.333%) in the adult group and 8(13.333%) in both groups. Mitochondrial copy
number in infant patients was lower than adults (P<0.05). A significant frequency differ-
ence was seen between the two groups for 12 single nucleotide polymorphism (SNP).
A novel insertion (317-318 ins CCC) was observed in patients and six SNPs were iden-
tified as neutral variants in controls. There was an inverse association between mito-
chondrial copy number and D-loop variant number (r=0.54).
Conclusion
The 317-318 ins CCC was detected as a new mitochondrial variant in
Pompe patients.
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