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For: D'Agostino D, Pasquale G, Clematis A, Maj C, Mosca E, Milanesi L, Merelli I. Parallel solutions for voxel-based simulations of reaction-diffusion systems. Biomed Res Int 2014;2014:980501. [PMID: 25045716 DOI: 10.1155/2014/980501] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/21/2014] [Revised: 05/12/2014] [Accepted: 05/18/2014] [Indexed: 11/25/2022]
Number Cited by Other Article(s)
1
Earnest TM, Cole JA, Luthey-Schulten Z. Simulating biological processes: stochastic physics from whole cells to colonies. REPORTS ON PROGRESS IN PHYSICS. PHYSICAL SOCIETY (GREAT BRITAIN) 2018;81:052601. [PMID: 29424367 DOI: 10.1088/1361-6633/aaae2c] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
2
Chen W, De Schutter E. Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers. Front Neuroinform 2017;11:13. [PMID: 28239346 PMCID: PMC5301017 DOI: 10.3389/fninf.2017.00013] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2016] [Accepted: 01/27/2017] [Indexed: 11/13/2022]  Open
3
Hepburn I, Chen W, De Schutter E. Accurate reaction-diffusion operator splitting on tetrahedral meshes for parallel stochastic molecular simulations. J Chem Phys 2017;145:054118. [PMID: 27497550 DOI: 10.1063/1.4960034] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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