Automatic segmentation of colon in 3D CT images and removal of opacified fluid using cascade feed forward neural network. Comput Math Methods Med. 2015;2015:670739. [PMID: 25838838 PMCID: PMC4369940 DOI: 10.1155/2015/670739]

Exploring the landscape of AI-assisted decision-making in head and neck cancer treatment: a comparative analysis of NCCN guidelines and ChatGPT responses

PURPOSE

Recent breakthroughs in natural language processing and machine learning, exemplified by ChatGPT, have spurred a paradigm shift in healthcare. Released by OpenAI in November 2022, ChatGPT rapidly gained global attention. Trained on massive text datasets, this large language model holds immense potential to revolutionize healthcare. However, existing literature often overlooks the need for rigorous validation and real-world applicability.

METHODS

This head-to-head comparative study assesses ChatGPT's capabilities in providing therapeutic recommendations for head and neck cancers. Simulating every NCCN Guidelines scenarios. ChatGPT is queried on primary treatments, adjuvant treatment, and follow-up, with responses compared to the NCCN Guidelines. Performance metrics, including sensitivity, specificity, and F1 score, are employed for assessment.

RESULTS

The study includes 68 hypothetical cases and 204 clinical scenarios. ChatGPT exhibits promising capabilities in addressing NCCN-related queries, achieving high sensitivity and overall accuracy across primary treatment, adjuvant treatment, and follow-up. The study's metrics showcase robustness in providing relevant suggestions. However, a few inaccuracies are noted, especially in primary treatment scenarios.

CONCLUSION

Our study highlights the proficiency of ChatGPT in providing treatment suggestions. The model's alignment with the NCCN Guidelines sets the stage for a nuanced exploration of AI's evolving role in oncological decision support. However, challenges related to the interpretability of AI in clinical decision-making and the importance of clinicians understanding the underlying principles of AI models remain unexplored. As AI continues to advance, collaborative efforts between models and medical experts are deemed essential for unlocking new frontiers in personalized cancer care.

TotalSegmentator: Robust Segmentation of 104 Anatomic Structures in CT Images

Purpose

To present a deep learning segmentation model that can automatically and robustly segment all major anatomic structures on body CT images.

Materials and Methods

In this retrospective study, 1204 CT examinations (from 2012, 2016, and 2020) were used to segment 104 anatomic structures (27 organs, 59 bones, 10 muscles, and eight vessels) relevant for use cases such as organ volumetry, disease characterization, and surgical or radiation therapy planning. The CT images were randomly sampled from routine clinical studies and thus represent a real-world dataset (different ages, abnormalities, scanners, body parts, sequences, and sites). The authors trained an nnU-Net segmentation algorithm on this dataset and calculated Dice similarity coefficients to evaluate the model's performance. The trained algorithm was applied to a second dataset of 4004 whole-body CT examinations to investigate age-dependent volume and attenuation changes.

Results

The proposed model showed a high Dice score (0.943) on the test set, which included a wide range of clinical data with major abnormalities. The model significantly outperformed another publicly available segmentation model on a separate dataset (Dice score, 0.932 vs 0.871; P < .001). The aging study demonstrated significant correlations between age and volume and mean attenuation for a variety of organ groups (eg, age and aortic volume [rs = 0.64; P < .001]; age and mean attenuation of the autochthonous dorsal musculature [rs = -0.74; P < .001]).

Conclusion

The developed model enables robust and accurate segmentation of 104 anatomic structures. The annotated dataset (https://doi.org/10.5281/zenodo.6802613) and toolkit (https://www.github.com/wasserth/TotalSegmentator) are publicly available.Keywords: CT, Segmentation, Neural Networks Supplemental material is available for this article. © RSNA, 2023See also commentary by Sebro and Mongan in this issue.

BowelNet: Joint Semantic-Geometric Ensemble Learning for Bowel Segmentation From Both Partially and Fully Labeled CT Images

Accurate bowel segmentation is essential for diagnosis and treatment of bowel cancers. Unfortunately, segmenting the entire bowel in CT images is quite challenging due to unclear boundary, large shape, size, and appearance variations, as well as diverse filling status within the bowel. In this paper, we present a novel two-stage framework, named BowelNet, to handle the challenging task of bowel segmentation in CT images, with two stages of 1) jointly localizing all types of the bowel, and 2) finely segmenting each type of the bowel. Specifically, in the first stage, we learn a unified localization network from both partially- and fully-labeled CT images to robustly detect all types of the bowel. To better capture unclear bowel boundary and learn complex bowel shapes, in the second stage, we propose to jointly learn semantic information (i.e., bowel segmentation mask) and geometric representations (i.e., bowel boundary and bowel skeleton) for fine bowel segmentation in a multi-task learning scheme. Moreover, we further propose to learn a meta segmentation network via pseudo labels to improve segmentation accuracy. By evaluating on a large abdominal CT dataset, our proposed BowelNet method can achieve Dice scores of 0.764, 0.848, 0.835, 0.774, and 0.824 in segmenting the duodenum, jejunum-ileum, colon, sigmoid, and rectum, respectively. These results demonstrate the effectiveness of our proposed BowelNet framework in segmenting the entire bowel from CT images.

Development of artificial intelligence technology in diagnosis, treatment, and prognosis of colorectal cancer

Artificial intelligence (AI) technology has made leaps and bounds since its invention. AI technology can be subdivided into many technologies such as machine learning and deep learning. The application scope and prospect of different technologies are also totally different. Currently, AI technologies play a pivotal role in the highly complex and wide-ranging medical field, such as medical image recognition, biotechnology, auxiliary diagnosis, drug research and development, and nutrition. Colorectal cancer (CRC) is a common gastrointestinal cancer that has a high mortality, posing a serious threat to human health. Many CRCs are caused by the malignant transformation of colorectal polyps. Therefore, early diagnosis and treatment are crucial to CRC prognosis. The methods of diagnosing CRC are divided into imaging diagnosis, endoscopy, and pathology diagnosis. Treatment methods are divided into endoscopic treatment, surgical treatment, and drug treatment. AI technology is in the weak era and does not have communication capabilities. Therefore, the current AI technology is mainly used for image recognition and auxiliary analysis without in-depth communication with patients. This article reviews the application of AI in the diagnosis, treatment, and prognosis of CRC and provides the prospects for the broader application of AI in CRC.

Status quo and future prospects of artificial neural network from the perspective of gastroenterologists

Artificial neural networks (ANNs) are one of the primary types of artificial intelligence and have been rapidly developed and used in many fields. In recent years, there has been a sharp increase in research concerning ANNs in gastrointestinal (GI) diseases. This state-of-the-art technique exhibits excellent performance in diagnosis, prognostic prediction, and treatment. Competitions between ANNs and GI experts suggest that efficiency and accuracy might be compatible in virtue of technique advancements. However, the shortcomings of ANNs are not negligible and may induce alterations in many aspects of medical practice. In this review, we introduce basic knowledge about ANNs and summarize the current achievements of ANNs in GI diseases from the perspective of gastroenterologists. Existing limitations and future directions are also proposed to optimize ANN’s clinical potential. In consideration of barriers to interdisciplinary knowledge, sophisticated concepts are discussed using plain words and metaphors to make this review more easily understood by medical practitioners and the general public.

Semi-automatic sigmoid colon segmentation in CT for radiation therapy treatment planning via an iterative 2.5-D deep learning approach

Automatic sigmoid colon segmentation in CT for radiotherapy treatment planning is challenging due to complex organ shape, close distances to other organs, and large variations in size, shape, and filling status. The patient bowel is often not evacuated, and CT contrast enhancement is not used, which further increase problem difficulty. Deep learning (DL) has demonstrated its power in many segmentation problems. However, standard 2-D approaches cannot handle the sigmoid segmentation problem due to incomplete geometry information and 3-D approaches often encounters the challenge of a limited training data size. Motivated by human's behavior that segments the sigmoid slice by slice while considering connectivity between adjacent slices, we proposed an iterative 2.5-D DL approach to solve this problem. We constructed a network that took an axial CT slice, the sigmoid mask in this slice, and an adjacent CT slice to segment as input and output the predicted mask on the adjacent slice. We also considered other organ masks as prior information. We trained the iterative network with 50 patient cases using five-fold cross validation. The trained network was repeatedly applied to generate masks slice by slice. The method achieved average Dice similarity coefficients of 0.82 0.06 and 0.88 0.02 in 10 test cases without and with using prior information.

Tumour travel tours - Why circulating cancer cells value company

Welcome to the New Year and a new issue of the Biomedical Journal, where we learn that travelling with company boosts the metastatic potential of circulating tumour cells, as well as that a worm could be an excellent model to study antidiabetic drugs. In addition, we discover another pair of molecular scissors for genetic engineering, how exactly Leptospira wreaks havoc on its run through the host organism, and that hyperparathyroidism brings its own risks, but does not worsen the outcome of papillary thyroid carcinoma. Furthermore, the importance of taking into account differing beauty ideals for aesthetic surgery surveys is discussed, alongside the question how bad isolated local recurrence is in the case of HR + breast cancer. Finally, we find out that virtual colonoscopy deserves more credit, that the first medical experiment in space was all about the H-reflex, and that it is possible to survive advanced necrotising fasciitis of the face and neck.

Estimation of wave reflection in aorta from radial pulse waveform by artificial neural network: a numerical study

BACKGROUND AND OBJECTIVE

Wave reflection in aorta has been shown to have incremental value for predicting cardiovascular events. However, its estimation by wave separation analysis (WSA) is complex.

METHODS

In this study, a novel method was proposed based on a cascade artificial neural network (ANN) for wave reflection estimation by the frequency features of radial pressure waveform alone. The simulation database of 4000 samples was generated by a 55-segment transmission line model of human arterial tree and was used for evaluating the ANN with 10-fold cross validation for the estimation of reflection magnitude (RM_ANN) and reflection index (RI_ANN) of wave reflection in aorta. RM and RI also were estimated by the WSA with a triangle waveform of aortic flow (RM_WSA and RI_WSA) and with a real aortic flow waveform (RM_Ref and RI_Ref) as reference values.

RESULTS

The results showed the correlation coefficient and mean difference between RM_ANN and RM_Ref (R² = 0.92, mean ± standard deviation (SD) = 0.0 ± 0.02) and those between RI_ANN and RI_Ref (R² = 0.91, mean ± SD = 0.0 ± 0.01) were better than those between RM_WSA and RM_Ref (R² = 0.51, mean ± SD = 0.01 ± 0.07) and those between RI_WSA and RI_Ref (R² = 0.50, mean ± SD = 0.0 ± 0.02). As the sample diversity in the simulation database was increased but the total number of samples keeps constant, the advantage of the ANN, though decreased slightly, became more significant than those of WSA (RM_ANN VS. RM_Ref and RI_ANN VS. RI_Ref: R² = 0.88 and 0.88, mean ± SD = 0.0 ± 0.05 and 0.0 ± 0.05; RM_WSA VS. RM_Ref and RI_WSA VS. RI_Ref: R² = 0.24 and 0.24, mean ± SD = 0.07 ± 0.24 and 0.02 ± 0.08, respectively). In addition, the ANN can achieve better results than the traditional method WSA even only two hidden neurons are used.

CONCLUSIONS

ANN is a potential method for the estimation of wave reflection in aorta by a single radial pulse waveform, but further validation of this method in clinic trials is needed.

Estimation of Pulse Transit Time From Radial Pressure Waveform Alone by Artificial Neural Network

OBJECTIVE

To validate the feasibility of the estimation of pulse transit time (PTT) by artificial neural network (ANN) from radial pressure waveform alone.

METHODS

A cascade ANN with ten-fold cross validation was applied to invasively and simultaneously recorded aortic and radial pressure waveforms during rest and nitroglycerin infusion () for the estimation of mean and beat-to-beat PTT. The results of the ANN models were compared to a multiple linear regression (LR) model when the features of radial arterial pressure waveform in time and frequency domains were used as the predictors of the models.

RESULTS

For the estimation of mean PTT and beat-to-beat PTT by ANN ( ), the correlation coefficient between the and the measured PTT () (mean: ; beat-to-beat: ) is higher than that between the PTT estimated by LR ( ) and (mean: ; beat-to-beat: ). The standard deviation (SD) of the difference between the and ( ; beat-to-beat: ) is significantly less than that between the and (; beat-to-beat: 10 ms), but no significant difference exists between their mean ( ). The lack of frequency features of radial pressure waveform caused obvious reduction in the correlation coefficient and SD of the difference between the and . The performance of the ANN was improved by increasing the sample number but not by increasing the neuron number.

CONCLUSION

ANN is a potential method of PTT estimation from a single pressure measurement at radial artery.